RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 NBR1Q14596 966 aa14.24□□□□□ -0.13
HPS4-212ENST00000481910 GRIPAP1Q4V328 841 aa14.24□□□□□ -0.13
HPS4-212ENST00000481910 RTKN2Q8IZC4 609 aa14.24□□□□□ -0.13
HPS4-212ENST00000481910 CLASRPQ8N2M8 674 aaKnown RBP14.24□□□□□ -0.13
HPS4-212ENST00000481910 GGA1Q9UJY5 639 aa14.24□□□□□ -0.13
HPS4-212ENST00000481910 LEMD3Q9Y2U8 911 aa14.24□□□□□ -0.13
HPS4-212ENST00000481910 WTIPA6NIX2 430 aaPredicted RBP14.23□□□□□ -0.13
HPS4-212ENST00000481910 C6orf229H3BNL8 230 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 HMGB1P09429 215 aaKnown RBP14.23□□□□□ -0.13
HPS4-212ENST00000481910 PUM3Q15397 648 aaKnown RBP14.23□□□□□ -0.13
HPS4-212ENST00000481910 NEUROD6Q96NK8 337 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 ZNF804BA4D1E1 1349 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 UFL1O94874 794 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 ATP2B4P23634 1241 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 TIMM10P62072 90 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 UBE4AQ14139 1066 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 ATP2B3Q16720 1220 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 TNNI3KQ59H18 835 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 TBC1D16Q8TBP0 767 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 GPR108Q9NPR9 543 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 POLLQ9UGP5 575 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 FPGT-TNNI3KV9GXZ4 949 aa14.23□□□□□ -0.13
HPS4-212ENST00000481910 ARFGEF1Q9Y6D6 1849 aa14.22□□□□□ -0.13
HPS4-212ENST00000481910 A0A1B0GUL6 1792 aa14.22□□□□□ -0.13
HPS4-212ENST00000481910 A0A1B0GUL7 405 aa14.22□□□□□ -0.13
HPS4-212ENST00000481910 NUCB1Q02818 461 aa14.22□□□□□ -0.13
HPS4-212ENST00000481910 AACSQ86V21 672 aa14.22□□□□□ -0.13
HPS4-212ENST00000481910 CHD1LQ86WJ1 897 aa14.22□□□□□ -0.13
HPS4-212ENST00000481910 LPIN2Q92539 896 aa14.22□□□□□ -0.13
HPS4-212ENST00000481910 EAF2Q96CJ1 260 aaPredicted RBP14.22□□□□□ -0.13
HPS4-212ENST00000481910 IFIT1P09914 478 aaKnown RBP14.21□□□□□ -0.13
HPS4-212ENST00000481910 SLC5A1P13866 664 aa14.21□□□□□ -0.13
HPS4-212ENST00000481910 FGFR2P21802 821 aa14.21□□□□□ -0.13
HPS4-212ENST00000481910 GPR162Q16538 588 aa14.21□□□□□ -0.13
HPS4-212ENST00000481910 LNPKQ9C0E8 428 aa14.21□□□□□ -0.13
HPS4-212ENST00000481910 IFIT2P09913 472 aaKnown RBP14.21□□□□□ -0.14
HPS4-212ENST00000481910 YBX3P16989 372 aaKnown RBP eCLIP14.21□□□□□ -0.14
HPS4-212ENST00000481910 CCDC8Q9H0W5 538 aaPredicted RBP14.21□□□□□ -0.14
HPS4-212ENST00000481910 SRCAPQ6ZRS2 3230 aa14.2□□□□□ -0.14
HPS4-212ENST00000481910 WASHC4Q2M389 1173 aa14.2□□□□□ -0.14
HPS4-212ENST00000481910 ARHGAP27Q6ZUM4 889 aa14.2□□□□□ -0.14
HPS4-212ENST00000481910 C16orf71Q8IYS4 520 aaPredicted RBP14.2□□□□□ -0.14
HPS4-212ENST00000481910 SUPT20HQ8NEM7 779 aa14.2□□□□□ -0.14
HPS4-212ENST00000481910 GPR101Q96P66 508 aaPredicted RBP14.2□□□□□ -0.14
HPS4-212ENST00000481910 PSMD1Q99460 953 aa14.2□□□□□ -0.14
HPS4-212ENST00000481910 RTFDC1Q9BY42 306 aaPredicted RBP14.2□□□□□ -0.14
HPS4-212ENST00000481910 LTBP1Q14766 1721 aa14.2□□□□□ -0.14
HPS4-212ENST00000481910 FKBP4Q02790 459 aaKnown RBP eCLIP14.19□□□□□ -0.14
HPS4-212ENST00000481910 XAGE2Q96GT9 111 aa14.19□□□□□ -0.14
HPS4-212ENST00000481910 EYA3Q99504 573 aa14.19□□□□□ -0.14
HPS4-212ENST00000481910 ZC3H12CQ9C0D7 883 aaKnown RBP14.19□□□□□ -0.14
HPS4-212ENST00000481910 TAOK3Q9H2K8 898 aa14.19□□□□□ -0.14
HPS4-212ENST00000481910 SNED1Q8TER0 1413 aa14.19□□□□□ -0.14
HPS4-212ENST00000481910 ZNF609O15014 1411 aa14.19□□□□□ -0.14
HPS4-212ENST00000481910 RIMBP2O15034 1052 aa14.19□□□□□ -0.14
HPS4-212ENST00000481910 KLRK1P26718 216 aa14.19□□□□□ -0.14
HPS4-212ENST00000481910 FER1L6Q2WGJ9 1857 aa14.19□□□□□ -0.14
HPS4-212ENST00000481910 CAVIN4Q5BKX8 364 aa14.19□□□□□ -0.14
HPS4-212ENST00000481910 GORABQ5T7V8 394 aa14.19□□□□□ -0.14
HPS4-212ENST00000481910 TXNRD3Q86VQ6 643 aa14.19□□□□□ -0.14
HPS4-212ENST00000481910 DUOX1Q9NRD9 1551 aa14.18□□□□□ -0.14
HPS4-212ENST00000481910 ADORA1P30542 326 aa14.18□□□□□ -0.14
HPS4-212ENST00000481910 DBNDD2Q9BQY9 259 aa14.18□□□□□ -0.14
HPS4-212ENST00000481910 TLR7Q9NYK1 1049 aaKnown RBP14.18□□□□□ -0.14
HPS4-212ENST00000481910 DBNLQ9UJU6 430 aaKnown RBP14.18□□□□□ -0.14
HPS4-212ENST00000481910 NFKBIEO00221 500 aa14.17□□□□□ -0.14
HPS4-212ENST00000481910 MYCNP04198 464 aaPredicted RBP14.17□□□□□ -0.14
HPS4-212ENST00000481910 GYG1P46976 350 aa14.17□□□□□ -0.14
HPS4-212ENST00000481910 C15orf52Q6ZUT6 534 aaKnown RBP14.17□□□□□ -0.14
HPS4-212ENST00000481910 VPS37DQ86XT2 251 aa14.17□□□□□ -0.14
HPS4-212ENST00000481910 ZNF277Q9NRM2 450 aaPredicted RBP14.17□□□□□ -0.14
HPS4-212ENST00000481910 MED23Q9ULK4 1368 aa14.17□□□□□ -0.14
HPS4-212ENST00000481910 G3V3G9 751 aa14.17□□□□□ -0.14
HPS4-212ENST00000481910 BCAMP50895 628 aa14.17□□□□□ -0.14
HPS4-212ENST00000481910 CCDC158Q5M9N0 1113 aa14.17□□□□□ -0.14
HPS4-212ENST00000481910 DCAF8Q5TAQ9 597 aa14.17□□□□□ -0.14
HPS4-212ENST00000481910 OTUD7AQ8TE49 926 aaPredicted RBP14.17□□□□□ -0.14
HPS4-212ENST00000481910 FAM84BQ96KN1 310 aaPredicted RBP14.17□□□□□ -0.14
HPS4-212ENST00000481910 PPIP5K2O43314 1243 aa14.16□□□□□ -0.14
HPS4-212ENST00000481910 GRIN3BO60391 1043 aa14.16□□□□□ -0.14
HPS4-212ENST00000481910 HIBADHP31937 336 aaKnown RBP14.16□□□□□ -0.14
HPS4-212ENST00000481910 AOC3Q16853 763 aa14.16□□□□□ -0.14
HPS4-212ENST00000481910 CCDC102BQ68D86 513 aa14.16□□□□□ -0.14
HPS4-212ENST00000481910 ZNF804AQ7Z570 1209 aa14.16□□□□□ -0.14
HPS4-212ENST00000481910 VPS33BQ9H267 617 aa14.16□□□□□ -0.14
HPS4-212ENST00000481910 LTBP3Q9NS15 1303 aa14.16□□□□□ -0.14
HPS4-212ENST00000481910 IRS2Q9Y4H2 1338 aa14.16□□□□□ -0.14
HPS4-212ENST00000481910 RASSF7Q02833 373 aa14.15□□□□□ -0.14
HPS4-212ENST00000481910 KIAA2012Q0VF49 1180 aa14.15□□□□□ -0.14
HPS4-212ENST00000481910 LARGE2Q8N3Y3 721 aa14.15□□□□□ -0.14
HPS4-212ENST00000481910 MX1P20591 662 aa14.15□□□□□ -0.14
HPS4-212ENST00000481910 IARSP41252 1262 aaKnown RBP14.15□□□□□ -0.14
HPS4-212ENST00000481910 PHKA1P46020 1223 aa14.15□□□□□ -0.14
HPS4-212ENST00000481910 DOK7Q18PE1 504 aa14.15□□□□□ -0.14
HPS4-212ENST00000481910 TTC39AQ5SRH9 613 aa14.15□□□□□ -0.14
HPS4-212ENST00000481910 FBXO33Q7Z6M2 555 aa14.15□□□□□ -0.14
HPS4-212ENST00000481910 GPATCH3Q96I76 525 aa14.15□□□□□ -0.14
HPS4-212ENST00000481910 GOLGB1Q14789 3259 aaKnown RBP14.14□□□□□ -0.15
HPS4-212ENST00000481910 ARAP2Q8WZ64 1704 aa14.14□□□□□ -0.15
HPS4-212ENST00000481910 DCAF8L1A6NGE4 600 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms