RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 PSMD1Q99460 953 aa28.34■■■□□ 2.13
SHISA4-203ENST00000481699 TAOK3Q9H2K8 898 aa28.34■■■□□ 2.13
SHISA4-203ENST00000481699 G3V3G9 751 aa28.33■■■□□ 2.13
SHISA4-203ENST00000481699 FGFR2P21802 821 aa28.33■■■□□ 2.13
SHISA4-203ENST00000481699 CAVIN4Q5BKX8 364 aa28.33■■■□□ 2.13
SHISA4-203ENST00000481699 DCAF8Q5TAQ9 597 aa28.33■■■□□ 2.13
SHISA4-203ENST00000481699 VPS37DQ86XT2 251 aa28.33■■■□□ 2.13
SHISA4-203ENST00000481699 RTFDC1Q9BY42 306 aaPredicted RBP28.33■■■□□ 2.13
SHISA4-203ENST00000481699 ZC3H12CQ9C0D7 883 aaKnown RBP28.33■■■□□ 2.13
SHISA4-203ENST00000481699 CCDC8Q9H0W5 538 aaPredicted RBP28.33■■■□□ 2.13
SHISA4-203ENST00000481699 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.33■■■□□ 2.13
SHISA4-203ENST00000481699 WASHC4Q2M389 1173 aa28.32■■■□□ 2.12
SHISA4-203ENST00000481699 EAF2Q96CJ1 260 aaPredicted RBP28.32■■■□□ 2.12
SHISA4-203ENST00000481699 GPATCH3Q96I76 525 aa28.32■■■□□ 2.12
SHISA4-203ENST00000481699 RIMBP2O15034 1052 aa28.31■■■□□ 2.12
SHISA4-203ENST00000481699 YBX3P16989 372 aaKnown RBP eCLIP28.31■■■□□ 2.12
SHISA4-203ENST00000481699 GPR101Q96P66 508 aaPredicted RBP28.31■■■□□ 2.12
SHISA4-203ENST00000481699 ARFGEF1Q9Y6D6 1849 aa28.31■■■□□ 2.12
SHISA4-203ENST00000481699 MED23Q9ULK4 1368 aa28.3■■■□□ 2.12
SHISA4-203ENST00000481699 GRIN3BO60391 1043 aa28.3■■■□□ 2.12
SHISA4-203ENST00000481699 XAGE2Q96GT9 111 aa28.3■■■□□ 2.12
SHISA4-203ENST00000481699 A0A1B0GUL6 1792 aa28.29■■■□□ 2.12
SHISA4-203ENST00000481699 WTIPA6NIX2 430 aaPredicted RBP28.29■■■□□ 2.12
SHISA4-203ENST00000481699 ZNF804AQ7Z570 1209 aa28.29■■■□□ 2.12
SHISA4-203ENST00000481699 PPIP5K2O43314 1243 aa28.28■■■□□ 2.12
SHISA4-203ENST00000481699 ADORA1P30542 326 aa28.28■■■□□ 2.12
SHISA4-203ENST00000481699 CCDC158Q5M9N0 1113 aa28.28■■■□□ 2.12
SHISA4-203ENST00000481699 C15orf52Q6ZUT6 534 aaKnown RBP28.28■■■□□ 2.12
SHISA4-203ENST00000481699 DBNDD2Q9BQY9 259 aa28.28■■■□□ 2.12
SHISA4-203ENST00000481699 VPS33BQ9H267 617 aa28.28■■■□□ 2.12
SHISA4-203ENST00000481699 ZNF277Q9NRM2 450 aaPredicted RBP28.28■■■□□ 2.12
SHISA4-203ENST00000481699 GNL3LQ9NVN8 582 aaKnown RBP28.28■■■□□ 2.12
SHISA4-203ENST00000481699 SNED1Q8TER0 1413 aa28.27■■■□□ 2.12
SHISA4-203ENST00000481699 LTBP3Q9NS15 1303 aa28.27■■■□□ 2.12
SHISA4-203ENST00000481699 NFKBIEO00221 500 aa28.27■■■□□ 2.12
SHISA4-203ENST00000481699 DBNLQ9UJU6 430 aaKnown RBP28.27■■■□□ 2.12
SHISA4-203ENST00000481699 LTBP1Q14766 1721 aa28.26■■■□□ 2.12
SHISA4-203ENST00000481699 DUOX1Q9NRD9 1551 aa28.26■■■□□ 2.11
SHISA4-203ENST00000481699 KLRK1P26718 216 aa28.26■■■□□ 2.11
SHISA4-203ENST00000481699 HIBADHP31937 336 aaKnown RBP28.26■■■□□ 2.11
SHISA4-203ENST00000481699 GYG1P46976 350 aa28.26■■■□□ 2.11
SHISA4-203ENST00000481699 RASSF7Q02833 373 aa28.26■■■□□ 2.11
SHISA4-203ENST00000481699 AOC3Q16853 763 aa28.26■■■□□ 2.11
SHISA4-203ENST00000481699 TTC39AQ5SRH9 613 aa28.26■■■□□ 2.11
SHISA4-203ENST00000481699 C16orf71Q8IYS4 520 aaPredicted RBP28.26■■■□□ 2.11
SHISA4-203ENST00000481699 LARGE2Q8N3Y3 721 aa28.26■■■□□ 2.11
SHISA4-203ENST00000481699 TLR7Q9NYK1 1049 aaKnown RBP28.26■■■□□ 2.11
SHISA4-203ENST00000481699 FRAT2O75474 233 aaPredicted RBP28.25■■■□□ 2.11
SHISA4-203ENST00000481699 IARSP41252 1262 aaKnown RBP28.25■■■□□ 2.11
SHISA4-203ENST00000481699 BCAMP50895 628 aa28.24■■■□□ 2.11
SHISA4-203ENST00000481699 KIAA2012Q0VF49 1180 aa28.24■■■□□ 2.11
SHISA4-203ENST00000481699 MX1P20591 662 aa28.23■■■□□ 2.11
SHISA4-203ENST00000481699 IFFO2Q5TF58 517 aa28.23■■■□□ 2.11
SHISA4-203ENST00000481699 CCDC102BQ68D86 513 aa28.23■■■□□ 2.11
SHISA4-203ENST00000481699 TXNRD3Q86VQ6 643 aa28.23■■■□□ 2.11
SHISA4-203ENST00000481699 FAM84BQ96KN1 310 aaPredicted RBP28.23■■■□□ 2.11
SHISA4-203ENST00000481699 COA1Q9GZY4 146 aa28.23■■■□□ 2.11
SHISA4-203ENST00000481699 UQCRFS1P1P0C7P4 283 aa28.22■■■□□ 2.11
SHISA4-203ENST00000481699 DOK7Q18PE1 504 aa28.22■■■□□ 2.11
SHISA4-203ENST00000481699 ECHDC1Q9NTX5 307 aa28.22■■■□□ 2.11
SHISA4-203ENST00000481699 GOLGB1Q14789 3259 aaKnown RBP28.21■■■□□ 2.11
SHISA4-203ENST00000481699 PHKA1P46020 1223 aa28.21■■■□□ 2.11
SHISA4-203ENST00000481699 FBXO33Q7Z6M2 555 aa28.21■■■□□ 2.11
SHISA4-203ENST00000481699 NIM1KQ8IY84 436 aa28.21■■■□□ 2.11
SHISA4-203ENST00000481699 OTUD7AQ8TE49 926 aaPredicted RBP28.21■■■□□ 2.11
SHISA4-203ENST00000481699 JDP2Q8WYK2 163 aa28.21■■■□□ 2.11
SHISA4-203ENST00000481699 FER1L6Q2WGJ9 1857 aa28.21■■■□□ 2.11
SHISA4-203ENST00000481699 IRS2Q9Y4H2 1338 aa28.2■■■□□ 2.11
SHISA4-203ENST00000481699 ERC2O15083 957 aa28.2■■■□□ 2.1
SHISA4-203ENST00000481699 LMNB1P20700 586 aa28.2■■■□□ 2.1
SHISA4-203ENST00000481699 ARAP2Q8WZ64 1704 aa28.2■■■□□ 2.1
SHISA4-203ENST00000481699 TTC41PQ6P2S7 1318 aa28.19■■■□□ 2.1
SHISA4-203ENST00000481699 DBNDD1Q9H9R9 158 aa28.19■■■□□ 2.1
SHISA4-203ENST00000481699 CD209Q9NNX6 404 aa28.19■■■□□ 2.1
SHISA4-203ENST00000481699 ECE2O60344 883 aa28.17■■■□□ 2.1
SHISA4-203ENST00000481699 PDE4AP27815 886 aa28.17■■■□□ 2.1
SHISA4-203ENST00000481699 IQSEC3Q9UPP2 1182 aaPredicted RBP28.17■■■□□ 2.1
SHISA4-203ENST00000481699 CEP350Q5VT06 3117 aa28.16■■■□□ 2.1
SHISA4-203ENST00000481699 SEMA3EO15041 775 aa28.16■■■□□ 2.1
SHISA4-203ENST00000481699 RGS3P49796 1198 aa28.16■■■□□ 2.1
SHISA4-203ENST00000481699 PDE1AP54750 535 aa28.16■■■□□ 2.1
SHISA4-203ENST00000481699 PODNQ7Z5L7 613 aa28.16■■■□□ 2.1
SHISA4-203ENST00000481699 FBXW7Q969H0 707 aa28.16■■■□□ 2.1
SHISA4-203ENST00000481699 DENND2AQ9ULE3 1009 aa28.16■■■□□ 2.1
SHISA4-203ENST00000481699 GLRX3O76003 335 aaKnown RBP28.15■■■□□ 2.1
SHISA4-203ENST00000481699 ATP5JP18859 108 aa28.15■■■□□ 2.1
SHISA4-203ENST00000481699 ARID4AP29374 1257 aaPredicted RBP28.15■■■□□ 2.1
SHISA4-203ENST00000481699 TSHZ3Q63HK5 1081 aa28.15■■■□□ 2.1
SHISA4-203ENST00000481699 PLEKHM2Q8IWE5 1019 aa28.15■■■□□ 2.1
SHISA4-203ENST00000481699 ZNF512BQ96KM6 892 aaPredicted RBP28.15■■■□□ 2.1
SHISA4-203ENST00000481699 STAP2Q9UGK3 403 aa28.15■■■□□ 2.1
SHISA4-203ENST00000481699 AOX1Q06278 1338 aa28.15■■■□□ 2.1
SHISA4-203ENST00000481699 IL1R1P14778 569 aa28.14■■■□□ 2.1
SHISA4-203ENST00000481699 CHAF1AQ13111 956 aaPredicted RBP28.14■■■□□ 2.1
SHISA4-203ENST00000481699 TDRD7Q8NHU6 1098 aaKnown RBP28.14■■■□□ 2.1
SHISA4-203ENST00000481699 RNF181Q9P0P0 153 aa28.14■■■□□ 2.1
SHISA4-203ENST00000481699 ZNRF3Q9ULT6 936 aa28.14■■■□□ 2.1
SHISA4-203ENST00000481699 SALL3Q9BXA9 1300 aa28.14■■■□□ 2.09
SHISA4-203ENST00000481699 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.13■■■□□ 2.09
SHISA4-203ENST00000481699 BOLA2Q9H3K6 86 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms