RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 RGS19P49795 217 aa13.29□□□□□ -0.28
SSBP1-210ENST00000481508 IFIT5Q13325 482 aaKnown RBP13.29□□□□□ -0.28
SSBP1-210ENST00000481508 TBC1D16Q8TBP0 767 aa13.29□□□□□ -0.28
SSBP1-210ENST00000481508 PUS3Q9BZE2 481 aaKnown RBP13.29□□□□□ -0.28
SSBP1-210ENST00000481508 BSDC1Q9NW68 430 aaPredicted RBP13.29□□□□□ -0.28
SSBP1-210ENST00000481508 TRPM7Q96QT4 1865 aa13.29□□□□□ -0.28
SSBP1-210ENST00000481508 SNAP23O00161 211 aa13.28□□□□□ -0.28
SSBP1-210ENST00000481508 PPIP5K2O43314 1243 aa13.28□□□□□ -0.28
SSBP1-210ENST00000481508 IGHMBP2P38935 993 aaKnown RBP13.28□□□□□ -0.28
SSBP1-210ENST00000481508 ITPRIPQ8IWB1 547 aa13.28□□□□□ -0.28
SSBP1-210ENST00000481508 C1orf115Q9H7X2 142 aa13.28□□□□□ -0.28
SSBP1-210ENST00000481508 PODXL2Q9NZ53 605 aa13.28□□□□□ -0.28
SSBP1-210ENST00000481508 RIMBP2O15034 1052 aa13.27□□□□□ -0.29
SSBP1-210ENST00000481508 UFL1O94874 794 aa13.27□□□□□ -0.29
SSBP1-210ENST00000481508 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
SSBP1-210ENST00000481508 KLRK1P26718 216 aa13.27□□□□□ -0.29
SSBP1-210ENST00000481508 CHRNDQ07001 517 aa13.27□□□□□ -0.29
SSBP1-210ENST00000481508 CCDC57Q2TAC2 916 aa13.27□□□□□ -0.29
SSBP1-210ENST00000481508 GRIPAP1Q4V328 841 aa13.27□□□□□ -0.29
SSBP1-210ENST00000481508 FTSJ3Q8IY81 847 aaKnown RBP13.27□□□□□ -0.29
SSBP1-210ENST00000481508 LARGE2Q8N3Y3 721 aa13.27□□□□□ -0.29
SSBP1-210ENST00000481508 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.29
SSBP1-210ENST00000481508 C6orf229H3BNL8 230 aa13.26□□□□□ -0.29
SSBP1-210ENST00000481508 TAF5LO75529 589 aa13.26□□□□□ -0.29
SSBP1-210ENST00000481508 XDHP47989 1333 aa13.26□□□□□ -0.29
SSBP1-210ENST00000481508 KIAA2012Q0VF49 1180 aa13.26□□□□□ -0.29
SSBP1-210ENST00000481508 LRRC24Q50LG9 513 aa13.26□□□□□ -0.29
SSBP1-210ENST00000481508 PASKQ96RG2 1323 aa13.26□□□□□ -0.29
SSBP1-210ENST00000481508 MPHOSPH8Q99549 860 aa13.26□□□□□ -0.29
SSBP1-210ENST00000481508 TMX4Q9H1E5 349 aaPredicted RBP13.26□□□□□ -0.29
SSBP1-210ENST00000481508 ANKIB1Q9P2G1 1089 aa13.26□□□□□ -0.29
SSBP1-210ENST00000481508 IRS2Q9Y4H2 1338 aa13.26□□□□□ -0.29
SSBP1-210ENST00000481508 YDJCA8MPS7 323 aa13.25□□□□□ -0.29
SSBP1-210ENST00000481508 FZD9O00144 591 aa13.25□□□□□ -0.29
SSBP1-210ENST00000481508 ZBTB7BO15156 539 aaPredicted RBP13.25□□□□□ -0.29
SSBP1-210ENST00000481508 DDNO94850 711 aaPredicted RBP13.25□□□□□ -0.29
SSBP1-210ENST00000481508 GNAI3P08754 354 aa13.25□□□□□ -0.29
SSBP1-210ENST00000481508 CLCN6P51797 869 aa13.25□□□□□ -0.29
SSBP1-210ENST00000481508 TXNRD3Q86VQ6 643 aa13.25□□□□□ -0.29
SSBP1-210ENST00000481508 SUPT20HQ8NEM7 779 aa13.25□□□□□ -0.29
SSBP1-210ENST00000481508 GGA1Q9UJY5 639 aa13.25□□□□□ -0.29
SSBP1-210ENST00000481508 PA2G4Q9UQ80 394 aaKnown RBP13.25□□□□□ -0.29
SSBP1-210ENST00000481508 COG6Q9Y2V7 657 aa13.25□□□□□ -0.29
SSBP1-210ENST00000481508 PNMA6EA0A0J9YXQ4 647 aa13.24□□□□□ -0.29
SSBP1-210ENST00000481508 ATP2B4P23634 1241 aa13.24□□□□□ -0.29
SSBP1-210ENST00000481508 PTPN12Q05209 780 aaKnown RBP13.24□□□□□ -0.29
SSBP1-210ENST00000481508 MVPQ14764 893 aaKnown RBP13.24□□□□□ -0.29
SSBP1-210ENST00000481508 DOK7Q18PE1 504 aa13.24□□□□□ -0.29
SSBP1-210ENST00000481508 WASHC4Q2M389 1173 aa13.24□□□□□ -0.29
SSBP1-210ENST00000481508 TAF7LQ5H9L4 462 aa13.24□□□□□ -0.29
SSBP1-210ENST00000481508 LDHAL6AQ6ZMR3 332 aa13.24□□□□□ -0.29
SSBP1-210ENST00000481508 NIM1KQ8IY84 436 aa13.24□□□□□ -0.29
SSBP1-210ENST00000481508 DBNDD1Q9H9R9 158 aa13.24□□□□□ -0.29
SSBP1-210ENST00000481508 KCNQ5Q9NR82 932 aa13.24□□□□□ -0.29
SSBP1-210ENST00000481508 TSKSQ9UJT2 592 aa13.24□□□□□ -0.29
SSBP1-210ENST00000481508 RIPOR2Q9Y4F9 1068 aa13.24□□□□□ -0.29
SSBP1-210ENST00000481508 GNAI2P04899 355 aa13.23□□□□□ -0.29
SSBP1-210ENST00000481508 CNNM1Q9NRU3 951 aa13.23□□□□□ -0.29
SSBP1-210ENST00000481508 ARAP2Q8WZ64 1704 aa13.22□□□□□ -0.29
SSBP1-210ENST00000481508 MED23Q9ULK4 1368 aa13.22□□□□□ -0.29
SSBP1-210ENST00000481508 ZNF804BA4D1E1 1349 aa13.22□□□□□ -0.29
SSBP1-210ENST00000481508 ECE2O60344 883 aa13.22□□□□□ -0.29
SSBP1-210ENST00000481508 MTX1Q13505 466 aa13.22□□□□□ -0.29
SSBP1-210ENST00000481508 ATG9AQ7Z3C6 839 aa13.22□□□□□ -0.29
SSBP1-210ENST00000481508 VGLL2Q8N8G2 317 aa13.22□□□□□ -0.29
SSBP1-210ENST00000481508 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
SSBP1-210ENST00000481508 SIL1Q9H173 461 aa13.22□□□□□ -0.29
SSBP1-210ENST00000481508 VPS33BQ9H267 617 aa13.22□□□□□ -0.29
SSBP1-210ENST00000481508 ZNRF3Q9ULT6 936 aa13.22□□□□□ -0.29
SSBP1-210ENST00000481508 TMEM88BA6NKF7 163 aa13.21□□□□□ -0.29
SSBP1-210ENST00000481508 SRGAP3O43295 1099 aa13.21□□□□□ -0.29
SSBP1-210ENST00000481508 RAD17O75943 681 aa13.21□□□□□ -0.29
SSBP1-210ENST00000481508 RRP1P56182 461 aaKnown RBP13.21□□□□□ -0.29
SSBP1-210ENST00000481508 CXCL9Q07325 125 aa13.21□□□□□ -0.29
SSBP1-210ENST00000481508 EYA3Q99504 573 aa13.21□□□□□ -0.29
SSBP1-210ENST00000481508 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
SSBP1-210ENST00000481508 LEMD3Q9Y2U8 911 aa13.21□□□□□ -0.29
SSBP1-210ENST00000481508 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.21□□□□□ -0.29
SSBP1-210ENST00000481508 MYH13Q9UKX3 1938 aa13.21□□□□□ -0.3
SSBP1-210ENST00000481508 EYA2O00167 538 aa13.2□□□□□ -0.3
SSBP1-210ENST00000481508 ZC3H12CQ9C0D7 883 aaKnown RBP13.2□□□□□ -0.3
SSBP1-210ENST00000481508 GJA3Q9Y6H8 435 aa13.2□□□□□ -0.3
SSBP1-210ENST00000481508 SHTN1A0MZ66 631 aa13.19□□□□□ -0.3
SSBP1-210ENST00000481508 EIF6P56537 245 aaKnown RBP13.19□□□□□ -0.3
SSBP1-210ENST00000481508 PDE3AQ14432 1141 aa13.19□□□□□ -0.3
SSBP1-210ENST00000481508 METTL24Q5JXM2 366 aa13.19□□□□□ -0.3
SSBP1-210ENST00000481508 COPRSQ9NQ92 184 aa13.19□□□□□ -0.3
SSBP1-210ENST00000481508 MROH5Q6ZUA9 1318 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 WDR33Q9C0J8 1336 aaKnown RBP13.18□□□□□ -0.3
SSBP1-210ENST00000481508 PSMD14O00487 310 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 MS4A1P11836 297 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 KCNJ4P48050 445 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 SCNN1DP51172 638 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 ATP8B2P98198 1209 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 DPY19L2Q6NUT2 758 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 CEP85Q6P2H3 762 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 GPC2Q8N158 579 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 L3MBTL3Q96JM7 780 aaPredicted RBP13.18□□□□□ -0.3
SSBP1-210ENST00000481508 MXD3Q9BW11 206 aa13.18□□□□□ -0.3
SSBP1-210ENST00000481508 MCOLN1Q9GZU1 580 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms