RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 CASC1Q6TDU7 716 aa12.76□□□□□ -0.37
LINC00173-203ENST00000480237 C3orf67Q6ZVT6 689 aa12.76□□□□□ -0.37
LINC00173-203ENST00000480237 ATG9AQ7Z3C6 839 aa12.76□□□□□ -0.37
LINC00173-203ENST00000480237 FPGT-TNNI3KV9GXZ4 949 aa12.76□□□□□ -0.37
LINC00173-203ENST00000480237 MAST2Q6P0Q8 1798 aa12.76□□□□□ -0.37
LINC00173-203ENST00000480237 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
LINC00173-203ENST00000480237 TBC1D9Q6ZT07 1266 aa12.75□□□□□ -0.37
LINC00173-203ENST00000480237 EAF2Q96CJ1 260 aaPredicted RBP12.75□□□□□ -0.37
LINC00173-203ENST00000480237 CCDC8Q9H0W5 538 aaPredicted RBP12.75□□□□□ -0.37
LINC00173-203ENST00000480237 CNNM1Q9NRU3 951 aa12.75□□□□□ -0.37
LINC00173-203ENST00000480237 ECHDC1Q9NTX5 307 aa12.75□□□□□ -0.37
LINC00173-203ENST00000480237 TFCP2L1Q9NZI6 479 aa12.75□□□□□ -0.37
LINC00173-203ENST00000480237 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.75□□□□□ -0.37
LINC00173-203ENST00000480237 KIF13BQ9NQT8 1826 aa12.75□□□□□ -0.37
LINC00173-203ENST00000480237 GLRX3O76003 335 aaKnown RBP12.74□□□□□ -0.37
LINC00173-203ENST00000480237 MFAP1P55081 439 aaKnown RBP12.74□□□□□ -0.37
LINC00173-203ENST00000480237 ZNF827Q17R98 1081 aa12.74□□□□□ -0.37
LINC00173-203ENST00000480237 PI4K2BQ8TCG2 481 aa12.74□□□□□ -0.37
LINC00173-203ENST00000480237 RILPL2Q969X0 211 aa12.74□□□□□ -0.37
LINC00173-203ENST00000480237 PUS3Q9BZE2 481 aaKnown RBP12.74□□□□□ -0.37
LINC00173-203ENST00000480237 TLR7Q9NYK1 1049 aaKnown RBP12.74□□□□□ -0.37
LINC00173-203ENST00000480237 SF3B2Q13435 895 aaKnown RBP12.73□□□□□ -0.37
LINC00173-203ENST00000480237 LDHAL6AQ6ZMR3 332 aa12.73□□□□□ -0.37
LINC00173-203ENST00000480237 CEP126Q9P2H0 1117 aa12.73□□□□□ -0.37
LINC00173-203ENST00000480237 CDK5RAP2Q96SN8 1893 aa12.73□□□□□ -0.37
LINC00173-203ENST00000480237 EIF5BO60841 1220 aaKnown RBP12.73□□□□□ -0.37
LINC00173-203ENST00000480237 GYS1P13807 737 aa12.73□□□□□ -0.37
LINC00173-203ENST00000480237 NFIXQ14938 502 aa12.73□□□□□ -0.37
LINC00173-203ENST00000480237 METTL24Q5JXM2 366 aa12.73□□□□□ -0.37
LINC00173-203ENST00000480237 TPTE2Q6XPS3 522 aa12.73□□□□□ -0.37
LINC00173-203ENST00000480237 CNTROBQ8N137 903 aa12.73□□□□□ -0.37
LINC00173-203ENST00000480237 GPR108Q9NPR9 543 aa12.73□□□□□ -0.37
LINC00173-203ENST00000480237 MYH2Q9UKX2 1941 aa12.72□□□□□ -0.37
LINC00173-203ENST00000480237 MAP4K4O95819 1239 aaPredicted RBP12.72□□□□□ -0.37
LINC00173-203ENST00000480237 IGHMBP2P38935 993 aaKnown RBP12.72□□□□□ -0.37
LINC00173-203ENST00000480237 CNBD1Q8NA66 436 aa12.72□□□□□ -0.37
LINC00173-203ENST00000480237 NEUROD6Q96NK8 337 aa12.72□□□□□ -0.37
LINC00173-203ENST00000480237 MPHOSPH8Q99549 860 aa12.72□□□□□ -0.37
LINC00173-203ENST00000480237 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.72□□□□□ -0.37
LINC00173-203ENST00000480237 DBNLQ9UJU6 430 aaKnown RBP12.72□□□□□ -0.37
LINC00173-203ENST00000480237 AKAP2Q9Y2D5 859 aa12.72□□□□□ -0.37
LINC00173-203ENST00000480237 LTBP1Q14766 1721 aa12.71□□□□□ -0.37
LINC00173-203ENST00000480237 FLAD1Q8NFF5 587 aa12.71□□□□□ -0.37
LINC00173-203ENST00000480237 CDC5LQ99459 802 aaKnown RBP12.71□□□□□ -0.37
LINC00173-203ENST00000480237 DBNDD2Q9BQY9 259 aa12.71□□□□□ -0.37
LINC00173-203ENST00000480237 SCUBE2Q9NQ36 999 aa12.71□□□□□ -0.37
LINC00173-203ENST00000480237 SEC31BQ9NQW1 1179 aa12.71□□□□□ -0.37
LINC00173-203ENST00000480237 MROH5Q6ZUA9 1318 aa12.71□□□□□ -0.38
LINC00173-203ENST00000480237 BRCA1P38398 1863 aaKnown RBP12.71□□□□□ -0.38
LINC00173-203ENST00000480237 BAZ2AQ9UIF9 1905 aaKnown RBP12.7□□□□□ -0.38
LINC00173-203ENST00000480237 A0A1B0GUL7 405 aa12.7□□□□□ -0.38
LINC00173-203ENST00000480237 BAG6P46379 1132 aa12.7□□□□□ -0.38
LINC00173-203ENST00000480237 EN1Q05925 392 aaPredicted RBP12.7□□□□□ -0.38
LINC00173-203ENST00000480237 SLC10A5Q5PT55 438 aa12.7□□□□□ -0.38
LINC00173-203ENST00000480237 MAMSTRQ6ZN01 415 aa12.7□□□□□ -0.38
LINC00173-203ENST00000480237 NLRP3Q96P20 1036 aa12.7□□□□□ -0.38
LINC00173-203ENST00000480237 MYH8P13535 1937 aa12.7□□□□□ -0.38
LINC00173-203ENST00000480237 ST5P78524 1137 aa12.69□□□□□ -0.38
LINC00173-203ENST00000480237 SF3B3Q15393 1217 aaKnown RBP12.69□□□□□ -0.38
LINC00173-203ENST00000480237 EZH2Q15910 746 aaKnown RBP12.69□□□□□ -0.38
LINC00173-203ENST00000480237 ATP2B3Q16720 1220 aa12.69□□□□□ -0.38
LINC00173-203ENST00000480237 CCDC24Q8N4L8 307 aa12.69□□□□□ -0.38
LINC00173-203ENST00000480237 RIPOR2Q9Y4F9 1068 aa12.69□□□□□ -0.38
LINC00173-203ENST00000480237 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
LINC00173-203ENST00000480237 GORABQ5T7V8 394 aa12.69□□□□□ -0.38
LINC00173-203ENST00000480237 COL23A1Q86Y22 540 aaPredicted RBP12.69□□□□□ -0.38
LINC00173-203ENST00000480237 ANKRD18AQ8IVF6 992 aa12.69□□□□□ -0.38
LINC00173-203ENST00000480237 TBC1D32Q96NH3 1257 aa12.69□□□□□ -0.38
LINC00173-203ENST00000480237 BOLA2Q9H3K6 86 aa12.69□□□□□ -0.38
LINC00173-203ENST00000480237 PNPLA7Q6ZV29 1317 aa12.68□□□□□ -0.38
LINC00173-203ENST00000480237 PSME4Q14997 1843 aa12.68□□□□□ -0.38
LINC00173-203ENST00000480237 SERPINB2P05120 415 aa12.68□□□□□ -0.38
LINC00173-203ENST00000480237 ATP5JP18859 108 aa12.68□□□□□ -0.38
LINC00173-203ENST00000480237 TIMM10P62072 90 aa12.68□□□□□ -0.38
LINC00173-203ENST00000480237 PRR5LQ6MZQ0 368 aa12.68□□□□□ -0.38
LINC00173-203ENST00000480237 EVI5LQ96CN4 794 aa12.68□□□□□ -0.38
LINC00173-203ENST00000480237 CAMKK2Q96RR4 588 aa12.68□□□□□ -0.38
LINC00173-203ENST00000480237 C22orf23Q9BZE7 217 aa12.68□□□□□ -0.38
LINC00173-203ENST00000480237 STK32BQ9NY57 414 aa12.68□□□□□ -0.38
LINC00173-203ENST00000480237 LAMB1P07942 1786 aa12.68□□□□□ -0.38
LINC00173-203ENST00000480237 ECM29Q5VYK3 1845 aa12.67□□□□□ -0.38
LINC00173-203ENST00000480237 PDE8BO95263 885 aa12.67□□□□□ -0.38
LINC00173-203ENST00000480237 DDR1Q08345 913 aa12.67□□□□□ -0.38
LINC00173-203ENST00000480237 VGLL2Q8N8G2 317 aa12.67□□□□□ -0.38
LINC00173-203ENST00000480237 DIAPH3Q9NSV4 1193 aa12.67□□□□□ -0.38
LINC00173-203ENST00000480237 REC8O95072 547 aa12.66□□□□□ -0.38
LINC00173-203ENST00000480237 CHMLP26374 656 aa12.66□□□□□ -0.38
LINC00173-203ENST00000480237 TM4SF1P30408 202 aa12.66□□□□□ -0.38
LINC00173-203ENST00000480237 ADORA1P30542 326 aa12.66□□□□□ -0.38
LINC00173-203ENST00000480237 PUM3Q15397 648 aaKnown RBP12.66□□□□□ -0.38
LINC00173-203ENST00000480237 TTC39AQ5SRH9 613 aa12.66□□□□□ -0.38
LINC00173-203ENST00000480237 DDX46Q7L014 1031 aaKnown RBP12.66□□□□□ -0.38
LINC00173-203ENST00000480237 XAGE2Q96GT9 111 aa12.66□□□□□ -0.38
LINC00173-203ENST00000480237 DNAJC2Q99543 621 aaKnown RBP12.66□□□□□ -0.38
LINC00173-203ENST00000480237 FSD1Q9BTV5 496 aa12.66□□□□□ -0.38
LINC00173-203ENST00000480237 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
LINC00173-203ENST00000480237 RFX7Q2KHR2 1363 aa12.66□□□□□ -0.38
LINC00173-203ENST00000480237 POLRMTO00411 1230 aaKnown RBP12.65□□□□□ -0.38
LINC00173-203ENST00000480237 SLC5A1P13866 664 aa12.65□□□□□ -0.38
LINC00173-203ENST00000480237 CCDC158Q5M9N0 1113 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms