RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 ALDH1B1P30837 517 aa11.03□□□□□ -0.64
NUDCD3-208ENST00000480209 PUM3Q15397 648 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-208ENST00000480209 SP8Q8IXZ3 490 aa11.03□□□□□ -0.64
NUDCD3-208ENST00000480209 CLASRPQ8N2M8 674 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-208ENST00000480209 PI4K2BQ8TCG2 481 aa11.03□□□□□ -0.64
NUDCD3-208ENST00000480209 RTN4Q9NQC3 1192 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-208ENST00000480209 DICER1Q9UPY3 1922 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-208ENST00000480209 XDHP47989 1333 aa11.03□□□□□ -0.64
NUDCD3-208ENST00000480209 MAST2Q6P0Q8 1798 aa11.03□□□□□ -0.64
NUDCD3-208ENST00000480209 TIAM2Q8IVF5 1701 aa11.02□□□□□ -0.65
NUDCD3-208ENST00000480209 MX1P20591 662 aa11.02□□□□□ -0.65
NUDCD3-208ENST00000480209 PDE1AP54750 535 aa11.02□□□□□ -0.65
NUDCD3-208ENST00000480209 TMC4Q7Z404 712 aa11.02□□□□□ -0.65
NUDCD3-208ENST00000480209 TXNRD3Q86VQ6 643 aa11.02□□□□□ -0.65
NUDCD3-208ENST00000480209 TTLL6Q8N841 843 aa11.02□□□□□ -0.65
NUDCD3-208ENST00000480209 XAGE2Q96GT9 111 aa11.02□□□□□ -0.65
NUDCD3-208ENST00000480209 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.65
NUDCD3-208ENST00000480209 ADAMTSL1Q8N6G6 1762 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 C21orf2O43822 256 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 UFL1O94874 794 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 IFIT2P09913 472 aaKnown RBP11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 GSPT1P15170 499 aaKnown RBP11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 SCARF1Q14162 830 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 TBC1D16Q8TBP0 767 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 LPIN2Q92539 896 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 NEUROD6Q96NK8 337 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 SYT17Q9BSW7 474 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 ANKRD2Q9GZV1 360 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 PIM2Q9P1W9 311 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 STAP2Q9UGK3 403 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 POLLQ9UGP5 575 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 ZNF804BA4D1E1 1349 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 MED23Q9ULK4 1368 aa11.01□□□□□ -0.65
NUDCD3-208ENST00000480209 SLC5A1P13866 664 aa11□□□□□ -0.65
NUDCD3-208ENST00000480209 PHKA1P46020 1223 aa11□□□□□ -0.65
NUDCD3-208ENST00000480209 UBE4AQ14139 1066 aa11□□□□□ -0.65
NUDCD3-208ENST00000480209 OSBPL3Q9H4L5 887 aa11□□□□□ -0.65
NUDCD3-208ENST00000480209 ANKIB1Q9P2G1 1089 aa11□□□□□ -0.65
NUDCD3-208ENST00000480209 ZBTB47Q9UFB7 747 aaPredicted RBP11□□□□□ -0.65
NUDCD3-208ENST00000480209 NSFL1CQ9UNZ2 370 aaKnown RBP11□□□□□ -0.65
NUDCD3-208ENST00000480209 AKAP2Q9Y2D5 859 aa11□□□□□ -0.65
NUDCD3-208ENST00000480209 GYG1P46976 350 aa10.99□□□□□ -0.65
NUDCD3-208ENST00000480209 DALRD3Q5D0E6 543 aaKnown RBP10.99□□□□□ -0.65
NUDCD3-208ENST00000480209 CCDC102BQ68D86 513 aa10.99□□□□□ -0.65
NUDCD3-208ENST00000480209 PI16Q6UXB8 463 aa10.99□□□□□ -0.65
NUDCD3-208ENST00000480209 FAM84BQ96KN1 310 aaPredicted RBP10.99□□□□□ -0.65
NUDCD3-208ENST00000480209 ECHDC1Q9NTX5 307 aa10.99□□□□□ -0.65
NUDCD3-208ENST00000480209 GGA1Q9UJY5 639 aa10.99□□□□□ -0.65
NUDCD3-208ENST00000480209 BCS1LQ9Y276 419 aa10.99□□□□□ -0.65
NUDCD3-208ENST00000480209 LEMD3Q9Y2U8 911 aa10.99□□□□□ -0.65
NUDCD3-208ENST00000480209 NDUFB9Q9Y6M9 179 aa10.99□□□□□ -0.65
NUDCD3-208ENST00000480209 AOX1Q06278 1338 aa10.99□□□□□ -0.65
NUDCD3-208ENST00000480209 SRCAPQ6ZRS2 3230 aa10.99□□□□□ -0.65
NUDCD3-208ENST00000480209 NFKBIEO00221 500 aa10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 IFIT1P09914 478 aaKnown RBP10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 ATP2B4P23634 1241 aa10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 ARID4AP29374 1257 aaPredicted RBP10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 MCAMP43121 646 aa10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 KCNJ4P48050 445 aa10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 BCAMP50895 628 aa10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 PRELPP51888 382 aa10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 CCDC93Q567U6 631 aa10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 TTC22Q5TAA0 569 aa10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 DPP8Q6V1X1 898 aaPredicted RBP10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 C15orf52Q6ZUT6 534 aaKnown RBP10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 MPNDQ8N594 471 aa10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 EDC3Q96F86 508 aaKnown RBP10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 RTFDC1Q9BY42 306 aaPredicted RBP10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 TTC41PQ6P2S7 1318 aa10.98□□□□□ -0.65
NUDCD3-208ENST00000480209 C6orf229H3BNL8 230 aa10.97□□□□□ -0.65
NUDCD3-208ENST00000480209 MAP4K4O95819 1239 aaPredicted RBP10.97□□□□□ -0.65
NUDCD3-208ENST00000480209 YBX3P16989 372 aaKnown RBP eCLIP10.97□□□□□ -0.65
NUDCD3-208ENST00000480209 ATP5JP18859 108 aa10.97□□□□□ -0.65
NUDCD3-208ENST00000480209 RASSF7Q02833 373 aa10.97□□□□□ -0.65
NUDCD3-208ENST00000480209 RASGRF1Q13972 1273 aa10.97□□□□□ -0.65
NUDCD3-208ENST00000480209 FBXO33Q7Z6M2 555 aa10.97□□□□□ -0.65
NUDCD3-208ENST00000480209 BOLA2Q9H3K6 86 aa10.97□□□□□ -0.65
NUDCD3-208ENST00000480209 IQSEC3Q9UPP2 1182 aaPredicted RBP10.97□□□□□ -0.65
NUDCD3-208ENST00000480209 RIMBP2O15034 1052 aa10.96□□□□□ -0.65
NUDCD3-208ENST00000480209 AOC3Q16853 763 aa10.96□□□□□ -0.65
NUDCD3-208ENST00000480209 TTC39AQ5SRH9 613 aa10.96□□□□□ -0.65
NUDCD3-208ENST00000480209 CC2D2BQ6DHV5 1058 aa10.96□□□□□ -0.65
NUDCD3-208ENST00000480209 GPATCH3Q96I76 525 aa10.96□□□□□ -0.65
NUDCD3-208ENST00000480209 SNRKQ9NRH2 765 aa10.96□□□□□ -0.65
NUDCD3-208ENST00000480209 UTRNP46939 3433 aa10.96□□□□□ -0.66
NUDCD3-208ENST00000480209 CDK5RAP2Q96SN8 1893 aa10.95□□□□□ -0.66
NUDCD3-208ENST00000480209 GLRX3O76003 335 aaKnown RBP10.95□□□□□ -0.66
NUDCD3-208ENST00000480209 FKBP4Q02790 459 aaKnown RBP eCLIP10.95□□□□□ -0.66
NUDCD3-208ENST00000480209 GORABQ5T7V8 394 aa10.95□□□□□ -0.66
NUDCD3-208ENST00000480209 ZNF512BQ96KM6 892 aaPredicted RBP10.95□□□□□ -0.66
NUDCD3-208ENST00000480209 PSMD1Q99460 953 aa10.95□□□□□ -0.66
NUDCD3-208ENST00000480209 ANTXR1Q9H6X2 564 aa10.95□□□□□ -0.66
NUDCD3-208ENST00000480209 ZNF277Q9NRM2 450 aaPredicted RBP10.95□□□□□ -0.66
NUDCD3-208ENST00000480209 HMG20BQ9P0W2 317 aa10.95□□□□□ -0.66
NUDCD3-208ENST00000480209 MYH2Q9UKX2 1941 aa10.95□□□□□ -0.66
NUDCD3-208ENST00000480209 LTBP3Q9NS15 1303 aa10.94□□□□□ -0.66
NUDCD3-208ENST00000480209 CHGBP05060 677 aa10.94□□□□□ -0.66
NUDCD3-208ENST00000480209 SDSP20132 328 aa10.94□□□□□ -0.66
NUDCD3-208ENST00000480209 HIBADHP31937 336 aaKnown RBP10.94□□□□□ -0.66
NUDCD3-208ENST00000480209 ZAP70P43403 619 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms