RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 MBIPQ9NS73 344 aa9.1□□□□□ -0.95
COL17A1-205ENST00000480127 XDHP47989 1333 aa9.09□□□□□ -0.95
COL17A1-205ENST00000480127 WNT10BO00744 389 aa9.09□□□□□ -0.95
COL17A1-205ENST00000480127 PDE8AO60658 829 aa9.09□□□□□ -0.95
COL17A1-205ENST00000480127 ATP2B4P23634 1241 aa9.09□□□□□ -0.95
COL17A1-205ENST00000480127 MKRN3Q13064 507 aaKnown RBP9.09□□□□□ -0.95
COL17A1-205ENST00000480127 CCDC152Q4G0S7 254 aa9.09□□□□□ -0.95
COL17A1-205ENST00000480127 DACT2Q5SW24 774 aa9.09□□□□□ -0.95
COL17A1-205ENST00000480127 CCDC30Q5VVM6 783 aa9.09□□□□□ -0.95
COL17A1-205ENST00000480127 CCDC191Q8NCU4 936 aa9.09□□□□□ -0.95
COL17A1-205ENST00000480127 MYD88Q99836 296 aa9.09□□□□□ -0.95
COL17A1-205ENST00000480127 MRS2Q9HD23 443 aa9.09□□□□□ -0.95
COL17A1-205ENST00000480127 IFT57Q9NWB7 429 aa9.09□□□□□ -0.95
COL17A1-205ENST00000480127 SALL2Q9Y467 1007 aaPredicted RBP9.09□□□□□ -0.95
COL17A1-205ENST00000480127 FKTNO75072 461 aa9.08□□□□□ -0.96
COL17A1-205ENST00000480127 PTPN12Q05209 780 aaKnown RBP9.08□□□□□ -0.96
COL17A1-205ENST00000480127 TTLL12Q14166 644 aaPredicted RBP9.08□□□□□ -0.96
COL17A1-205ENST00000480127 ANKRD18AQ8IVF6 992 aa9.08□□□□□ -0.96
COL17A1-205ENST00000480127 MED23Q9ULK4 1368 aa9.08□□□□□ -0.96
COL17A1-205ENST00000480127 ZNF646O15015 1829 aaPredicted RBP9.08□□□□□ -0.96
COL17A1-205ENST00000480127 SASH1O94885 1247 aa9.07□□□□□ -0.96
COL17A1-205ENST00000480127 ZNF853P0CG23 659 aa9.07□□□□□ -0.96
COL17A1-205ENST00000480127 SREBF2Q12772 1141 aa9.07□□□□□ -0.96
COL17A1-205ENST00000480127 LDLRAD1Q5T700 205 aa9.07□□□□□ -0.96
COL17A1-205ENST00000480127 SPRYD7Q5W111 196 aa9.07□□□□□ -0.96
COL17A1-205ENST00000480127 CWC25Q9NXE8 425 aaPredicted RBP9.07□□□□□ -0.96
COL17A1-205ENST00000480127 MINPP1Q9UNW1 487 aa9.07□□□□□ -0.96
COL17A1-205ENST00000480127 NF2P35240 595 aa9.06□□□□□ -0.96
COL17A1-205ENST00000480127 CTSWP56202 376 aa9.06□□□□□ -0.96
COL17A1-205ENST00000480127 PRKG1Q13976 671 aa9.06□□□□□ -0.96
COL17A1-205ENST00000480127 STRIP1Q5VSL9 837 aa9.06□□□□□ -0.96
COL17A1-205ENST00000480127 TXNRD3Q86VQ6 643 aa9.06□□□□□ -0.96
COL17A1-205ENST00000480127 OGFOD1Q8N543 542 aa9.06□□□□□ -0.96
COL17A1-205ENST00000480127 TTLL11Q8NHH1 800 aa9.06□□□□□ -0.96
COL17A1-205ENST00000480127 FBXW7Q969H0 707 aa9.06□□□□□ -0.96
COL17A1-205ENST00000480127 GCC1Q96CN9 775 aa9.06□□□□□ -0.96
COL17A1-205ENST00000480127 ZBED3Q96IU2 234 aaPredicted RBP9.06□□□□□ -0.96
COL17A1-205ENST00000480127 METTL22Q9BUU2 404 aaPredicted RBP9.06□□□□□ -0.96
COL17A1-205ENST00000480127 COA1Q9GZY4 146 aa9.06□□□□□ -0.96
COL17A1-205ENST00000480127 BSDC1Q9NW68 430 aaPredicted RBP9.06□□□□□ -0.96
COL17A1-205ENST00000480127 MYO3BQ8WXR4 1341 aa9.05□□□□□ -0.96
COL17A1-205ENST00000480127 POTEFA5A3E0 1075 aa9.05□□□□□ -0.96
COL17A1-205ENST00000480127 CCT4P50991 539 aaKnown RBP9.05□□□□□ -0.96
COL17A1-205ENST00000480127 HABP4Q5JVS0 413 aaKnown RBP9.05□□□□□ -0.96
COL17A1-205ENST00000480127 ARMC9Q7Z3E5 817 aa9.05□□□□□ -0.96
COL17A1-205ENST00000480127 TSR2Q969E8 191 aaKnown RBP9.05□□□□□ -0.96
COL17A1-205ENST00000480127 CDC5LQ99459 802 aaKnown RBP9.05□□□□□ -0.96
COL17A1-205ENST00000480127 GREM2Q9H772 168 aa9.05□□□□□ -0.96
COL17A1-205ENST00000480127 ANGEL1Q9UNK9 670 aaKnown RBP9.05□□□□□ -0.96
COL17A1-205ENST00000480127 FZD1Q9UP38 647 aa9.05□□□□□ -0.96
COL17A1-205ENST00000480127 MANSC4A6NHS7 340 aaPredicted RBP9.04□□□□□ -0.96
COL17A1-205ENST00000480127 ALDH1A1P00352 501 aa9.04□□□□□ -0.96
COL17A1-205ENST00000480127 IGKV5-2P06315 115 aa9.04□□□□□ -0.96
COL17A1-205ENST00000480127 KLRK1P26718 216 aa9.04□□□□□ -0.96
COL17A1-205ENST00000480127 MMP14P50281 582 aa9.04□□□□□ -0.96
COL17A1-205ENST00000480127 MAP3K11Q16584 847 aa9.04□□□□□ -0.96
COL17A1-205ENST00000480127 TTLL5Q6EMB2 1281 aa9.04□□□□□ -0.96
COL17A1-205ENST00000480127 OTOP1Q7RTM1 612 aa9.04□□□□□ -0.96
COL17A1-205ENST00000480127 IFNL1Q8IU54 200 aa9.04□□□□□ -0.96
COL17A1-205ENST00000480127 APOBEC3FQ8IUX4 373 aaKnown RBP9.04□□□□□ -0.96
COL17A1-205ENST00000480127 KIAA0825Q8IV33 1275 aa9.04□□□□□ -0.96
COL17A1-205ENST00000480127 C8orf58Q8NAV2 365 aa9.04□□□□□ -0.96
COL17A1-205ENST00000480127 MAP3K2Q9Y2U5 619 aa9.04□□□□□ -0.96
COL17A1-205ENST00000480127 TRIM17Q9Y577 477 aa9.04□□□□□ -0.96
COL17A1-205ENST00000480127 IGF2BP3O00425 579 aaKnown RBP eCLIP9.03□□□□□ -0.96
COL17A1-205ENST00000480127 KCNJ4P48050 445 aa9.03□□□□□ -0.96
COL17A1-205ENST00000480127 INHBEP58166 350 aa9.03□□□□□ -0.96
COL17A1-205ENST00000480127 FKBP5Q13451 457 aaPredicted RBP9.03□□□□□ -0.96
COL17A1-205ENST00000480127 TWISTNBQ3B726 338 aaPredicted RBP9.03□□□□□ -0.96
COL17A1-205ENST00000480127 INTS3Q68E01 1043 aaKnown RBP9.03□□□□□ -0.96
COL17A1-205ENST00000480127 FAM9BQ8IZU0 186 aa9.03□□□□□ -0.96
COL17A1-205ENST00000480127 DEFB129Q9H1M3 183 aa9.03□□□□□ -0.96
COL17A1-205ENST00000480127 MYH16Q9H6N6 1097 aa9.03□□□□□ -0.96
COL17A1-205ENST00000480127 LEMD3Q9Y2U8 911 aa9.03□□□□□ -0.96
COL17A1-205ENST00000480127 CHMP3Q9Y3E7 222 aa9.03□□□□□ -0.96
COL17A1-205ENST00000480127 SSC5DA1L4H1 1573 aa9.03□□□□□ -0.96
COL17A1-205ENST00000480127 ZNF804BA4D1E1 1349 aa9.03□□□□□ -0.96
COL17A1-205ENST00000480127 COL1A1P02452 1464 aaPredicted RBP9.02□□□□□ -0.96
COL17A1-205ENST00000480127 PI4KAP2A4QPH2 592 aa9.02□□□□□ -0.97
COL17A1-205ENST00000480127 ZNF316A6NFI3 1004 aaPredicted RBP9.02□□□□□ -0.97
COL17A1-205ENST00000480127 SLC4A2P04920 1241 aa9.02□□□□□ -0.97
COL17A1-205ENST00000480127 ZBTB48P10074 688 aaPredicted RBP9.02□□□□□ -0.97
COL17A1-205ENST00000480127 GTF2IP78347 998 aa9.02□□□□□ -0.97
COL17A1-205ENST00000480127 CAP1Q01518 475 aa9.02□□□□□ -0.97
COL17A1-205ENST00000480127 KSR2Q6VAB6 950 aa9.02□□□□□ -0.97
COL17A1-205ENST00000480127 CERS5Q8N5B7 392 aa9.02□□□□□ -0.97
COL17A1-205ENST00000480127 PI4KAP1Q8N8J0 262 aa9.02□□□□□ -0.97
COL17A1-205ENST00000480127 SLC10A4Q96EP9 437 aa9.02□□□□□ -0.97
COL17A1-205ENST00000480127 WNK4Q96J92 1243 aa9.02□□□□□ -0.97
COL17A1-205ENST00000480127 CLMNQ96JQ2 1002 aa9.02□□□□□ -0.97
COL17A1-205ENST00000480127 PTPN22Q9Y2R2 807 aa9.02□□□□□ -0.97
COL17A1-205ENST00000480127 PCDHAC2Q9Y5I4 1007 aa9.02□□□□□ -0.97
COL17A1-205ENST00000480127 SPEF2Q9C093 1822 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 NEURL1BA8MQ27 555 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 H7C1W4 665 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 EN2P19622 333 aaPredicted RBP9.01□□□□□ -0.97
COL17A1-205ENST00000480127 GJA5P36382 358 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 IGHMBP2P38935 993 aaKnown RBP9.01□□□□□ -0.97
COL17A1-205ENST00000480127 DLGAP5Q15398 846 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 CWF19L2Q2TBE0 894 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms