RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 AK7Q96M32 723 aa12.72□□□□□ -0.37
CHD6-208ENST00000480022 TNMDQ9H2S6 317 aa12.72□□□□□ -0.37
CHD6-208ENST00000480022 PRDM16Q9HAZ2 1276 aa12.72□□□□□ -0.37
CHD6-208ENST00000480022 SMC3Q9UQE7 1217 aa12.72□□□□□ -0.37
CHD6-208ENST00000480022 PDE1AP54750 535 aa12.71□□□□□ -0.37
CHD6-208ENST00000480022 GNAI1P63096 354 aa12.71□□□□□ -0.37
CHD6-208ENST00000480022 CEP85Q6P2H3 762 aa12.71□□□□□ -0.37
CHD6-208ENST00000480022 UBXN6Q9BZV1 441 aa12.71□□□□□ -0.37
CHD6-208ENST00000480022 KCND1Q9NSA2 647 aa12.71□□□□□ -0.37
CHD6-208ENST00000480022 PATL2C9JE40 543 aaKnown RBP12.71□□□□□ -0.37
CHD6-208ENST00000480022 TTC31Q49AM3 519 aaPredicted RBP12.71□□□□□ -0.37
CHD6-208ENST00000480022 CKAP2LQ8IYA6 745 aa12.71□□□□□ -0.37
CHD6-208ENST00000480022 TOMM22Q9NS69 142 aa12.71□□□□□ -0.37
CHD6-208ENST00000480022 MBIPQ9NS73 344 aa12.71□□□□□ -0.37
CHD6-208ENST00000480022 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
CHD6-208ENST00000480022 KCNQ3O43525 872 aa12.7□□□□□ -0.38
CHD6-208ENST00000480022 TRIM37O94972 964 aa12.7□□□□□ -0.38
CHD6-208ENST00000480022 OAS2P29728 719 aaKnown RBP12.7□□□□□ -0.38
CHD6-208ENST00000480022 ZNF165P49910 485 aa12.7□□□□□ -0.38
CHD6-208ENST00000480022 SLC39A6Q13433 755 aa12.7□□□□□ -0.38
CHD6-208ENST00000480022 ARID5BQ14865 1188 aa12.7□□□□□ -0.38
CHD6-208ENST00000480022 BABAM1Q9NWV8 329 aa12.7□□□□□ -0.38
CHD6-208ENST00000480022 ASAP1Q9ULH1 1129 aa12.7□□□□□ -0.38
CHD6-208ENST00000480022 ELL2O00472 640 aaPredicted RBP12.7□□□□□ -0.38
CHD6-208ENST00000480022 CCZ1BP86790 482 aa12.7□□□□□ -0.38
CHD6-208ENST00000480022 CCZ1P86791 482 aaPredicted RBP12.7□□□□□ -0.38
CHD6-208ENST00000480022 CCDC93Q567U6 631 aa12.7□□□□□ -0.38
CHD6-208ENST00000480022 IQUBQ8NA54 791 aa12.7□□□□□ -0.38
CHD6-208ENST00000480022 CHMP3Q9Y3E7 222 aa12.7□□□□□ -0.38
CHD6-208ENST00000480022 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.7□□□□□ -0.38
CHD6-208ENST00000480022 CCDC69A6NI79 296 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 LIG1P18858 919 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 SNW1Q13573 536 aaKnown RBP12.69□□□□□ -0.38
CHD6-208ENST00000480022 ZNF790Q6PG37 636 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 GPATCH11Q8N954 259 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 LRRN4CLQ8ND94 238 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 MRFAP1L1Q96HT8 127 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 DRC1Q96MC2 740 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 PSD3Q9NYI0 1048 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 NHSQ6T4R5 1651 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 CASTP20810 708 aaKnown RBP12.69□□□□□ -0.38
CHD6-208ENST00000480022 CC2D2BQ6DHV5 1058 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 UBXN4Q92575 508 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 DEF6Q9H4E7 631 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 ZCCHC17Q9NP64 241 aaKnown RBP12.69□□□□□ -0.38
CHD6-208ENST00000480022 ORC3Q9UBD5 711 aaPredicted RBP12.69□□□□□ -0.38
CHD6-208ENST00000480022 MTMR6Q9Y217 621 aa12.69□□□□□ -0.38
CHD6-208ENST00000480022 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
CHD6-208ENST00000480022 ATP2B1P20020 1258 aa12.68□□□□□ -0.38
CHD6-208ENST00000480022 CHMLP26374 656 aa12.68□□□□□ -0.38
CHD6-208ENST00000480022 MAGEA9P43362 315 aa12.68□□□□□ -0.38
CHD6-208ENST00000480022 SARM1Q6SZW1 724 aa12.68□□□□□ -0.38
CHD6-208ENST00000480022 BANK1Q8NDB2 785 aa12.68□□□□□ -0.38
CHD6-208ENST00000480022 EXOC4Q96A65 974 aa12.68□□□□□ -0.38
CHD6-208ENST00000480022 SMC1AQ14683 1233 aaKnown RBP12.68□□□□□ -0.38
CHD6-208ENST00000480022 TWISTNBQ3B726 338 aaPredicted RBP12.68□□□□□ -0.38
CHD6-208ENST00000480022 PACS2Q86VP3 889 aa12.68□□□□□ -0.38
CHD6-208ENST00000480022 REXO1L1PQ8IX06 675 aa12.68□□□□□ -0.38
CHD6-208ENST00000480022 DDX19AQ9NUU7 478 aaKnown RBP12.68□□□□□ -0.38
CHD6-208ENST00000480022 LIMCH1Q9UPQ0 1083 aa12.68□□□□□ -0.38
CHD6-208ENST00000480022 CEP83Q9Y592 693 aa12.68□□□□□ -0.38
CHD6-208ENST00000480022 GOLGA6L19H0YKK7 550 aa12.67□□□□□ -0.38
CHD6-208ENST00000480022 CAVIN2O95810 425 aa12.67□□□□□ -0.38
CHD6-208ENST00000480022 CT47A1Q5JQC4 288 aaPredicted RBP12.67□□□□□ -0.38
CHD6-208ENST00000480022 RBM43Q6ZSC3 357 aaKnown RBP12.67□□□□□ -0.38
CHD6-208ENST00000480022 TTC6Q86TZ1 520 aa12.67□□□□□ -0.38
CHD6-208ENST00000480022 DNAJC25Q9H1X3 360 aa12.67□□□□□ -0.38
CHD6-208ENST00000480022 DACT1Q9NYF0 836 aa12.67□□□□□ -0.38
CHD6-208ENST00000480022 CCDC172P0C7W6 258 aa12.67□□□□□ -0.38
CHD6-208ENST00000480022 HSPA4P34932 840 aa12.67□□□□□ -0.38
CHD6-208ENST00000480022 ACTN2P35609 894 aa12.67□□□□□ -0.38
CHD6-208ENST00000480022 EIF4A1P60842 406 aaKnown RBP12.67□□□□□ -0.38
CHD6-208ENST00000480022 KRT85P78386 507 aa12.67□□□□□ -0.38
CHD6-208ENST00000480022 TTC5Q8N0Z6 440 aa12.67□□□□□ -0.38
CHD6-208ENST00000480022 ITGB4P16144 1822 aa12.67□□□□□ -0.38
CHD6-208ENST00000480022 EPB41L2O43491 1005 aaKnown RBP12.66□□□□□ -0.38
CHD6-208ENST00000480022 IVLP07476 585 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 LMAN1P49257 510 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 SEC31AO94979 1220 aaKnown RBP12.66□□□□□ -0.38
CHD6-208ENST00000480022 TUBB4AP04350 444 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 TPM1P09493 284 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 KRT24Q2M2I5 525 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 TSGA10IPQ3SY00 556 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 ZNF496Q96IT1 587 aaPredicted RBP12.66□□□□□ -0.38
CHD6-208ENST00000480022 CLSTN2Q9H4D0 955 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 SBF2Q86WG5 1849 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 PALLDQ8WX93 1383 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 PTCD1O75127 700 aaKnown RBP12.66□□□□□ -0.38
CHD6-208ENST00000480022 HMMRO75330 724 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 GJB2P29033 226 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 AK2P54819 239 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 LEKR1Q6ZMV7 388 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 ILDR2Q71H61 639 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 RILPL2Q969X0 211 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 TTC14Q96N46 770 aa12.66□□□□□ -0.38
CHD6-208ENST00000480022 PAPPAQ13219 1627 aa12.65□□□□□ -0.38
CHD6-208ENST00000480022 VPS37CA5D8V6 355 aaPredicted RBP12.65□□□□□ -0.38
CHD6-208ENST00000480022 GOLGA6L4A6NEF3 574 aa12.65□□□□□ -0.38
CHD6-208ENST00000480022 TBC1D8O95759 1140 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms