RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 GABPB2Q8TAK5 448 aaPredicted RBP10.12□□□□□ -0.79
TTC3-216ENST00000479930 CCDC12Q8WUD4 166 aaPredicted RBP10.12□□□□□ -0.79
TTC3-216ENST00000479930 ATP6V1AP38606 617 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 AZI2Q9H6S1 392 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.12□□□□□ -0.794e-7■■□□□ 13.6
TTC3-216ENST00000479930 ZMYND10O75800 440 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 CDC5LQ99459 802 aaKnown RBP10.12□□□□□ -0.79
TTC3-216ENST00000479930 CARD10Q9BWT7 1032 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 BRPF3Q9ULD4 1205 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 MGEA5O60502 916 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 STRN3Q13033 797 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 ARHGAP29Q52LW3 1261 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 GDPD2Q9HCC8 539 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 CC2D2BQ6DHV5 1058 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 METTL13Q8N6R0 699 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 GDAP1Q8TB36 358 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 C6orf50Q9HD87 102 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 AKAP2Q9Y2D5 859 aa10.12□□□□□ -0.79
TTC3-216ENST00000479930 NDUFB5O43674 189 aa10.11□□□□□ -0.79
TTC3-216ENST00000479930 E4F1Q66K89 784 aaPredicted RBP10.11□□□□□ -0.79
TTC3-216ENST00000479930 RETREG2Q8NC44 543 aa10.11□□□□□ -0.79
TTC3-216ENST00000479930 C16orf45Q96MC5 204 aaPredicted RBP10.11□□□□□ -0.79
TTC3-216ENST00000479930 SRRTQ9BXP5 876 aaKnown RBP10.11□□□□□ -0.79
TTC3-216ENST00000479930 BRD2P25440 801 aaKnown RBP10.11□□□□□ -0.79
TTC3-216ENST00000479930 HSPA1LP34931 641 aa10.11□□□□□ -0.79
TTC3-216ENST00000479930 RFC1P35251 1148 aaPredicted RBP10.11□□□□□ -0.79
TTC3-216ENST00000479930 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.11□□□□□ -0.79
TTC3-216ENST00000479930 ATXN3P54252 364 aaPredicted RBP10.11□□□□□ -0.79
TTC3-216ENST00000479930 AMOTQ4VCS5 1084 aa10.11□□□□□ -0.79
TTC3-216ENST00000479930 PRR16Q569H4 304 aa10.11□□□□□ -0.79
TTC3-216ENST00000479930 MAATS1Q7Z4T9 603 aa10.11□□□□□ -0.79
TTC3-216ENST00000479930 RAD18Q9NS91 495 aa10.11□□□□□ -0.79
TTC3-216ENST00000479930 PPP1R14AQ96A00 147 aa10.11□□□□□ -0.79
TTC3-216ENST00000479930 CLCA2Q9UQC9 943 aa10.11□□□□□ -0.79
TTC3-216ENST00000479930 DNM2P50570 870 aa10.11□□□□□ -0.79
TTC3-216ENST00000479930 AMPD3Q01432 767 aa10.11□□□□□ -0.79
TTC3-216ENST00000479930 HMGB1P1B2RPK0 211 aaPredicted RBP10.1□□□□□ -0.79
TTC3-216ENST00000479930 KIF3CO14782 793 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 SSRP1Q08945 709 aaKnown RBP10.1□□□□□ -0.79
TTC3-216ENST00000479930 SZRD1Q7Z422 152 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 NUP88Q99567 741 aaPredicted RBP10.1□□□□□ -0.79
TTC3-216ENST00000479930 PYGLP06737 847 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 DEKP35659 375 aaKnown RBP10.1□□□□□ -0.79
TTC3-216ENST00000479930 IFIT5Q13325 482 aaKnown RBP10.1□□□□□ -0.79
TTC3-216ENST00000479930 FNBP1Q96RU3 617 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 GGNBP2Q9H3C7 697 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 FIBPO43427 364 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 RNF8O76064 485 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 POLA2Q14181 598 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 ALKBH2Q6NS38 261 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 UBXN4Q92575 508 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 TCP11L1Q9NUJ3 509 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 BICDL2A1A5D9 508 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 PRPF6O94906 941 aaKnown RBP10.1□□□□□ -0.79
TTC3-216ENST00000479930 PPFIBP2Q8ND30 876 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 EYA3Q99504 573 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 IFT81Q8WYA0 676 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 DDX12PQ92771 950 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 SLC12A7Q9Y666 1083 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 CRACR2AQ9BSW2 395 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 CCDC169A6NNP5 214 aa10.1□□□□□ -0.79
TTC3-216ENST00000479930 HEXIM1O94992 359 aaKnown RBP10.1□□□□□ -0.79
TTC3-216ENST00000479930 RBBP5Q15291 538 aaKnown RBP10.1□□□□□ -0.79
TTC3-216ENST00000479930 MRRFQ96E11 262 aaKnown RBP10.1□□□□□ -0.79
TTC3-216ENST00000479930 SART1O43290 800 aaKnown RBP10.09□□□□□ -0.79
TTC3-216ENST00000479930 UBLCP1Q8WVY7 318 aaPredicted RBP10.09□□□□□ -0.79
TTC3-216ENST00000479930 STX8Q9UNK0 236 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 CASP2P42575 452 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 DAB2P98082 770 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 PDCD2Q16342 344 aaPredicted RBP10.09□□□□□ -0.79
TTC3-216ENST00000479930 SIX5Q8N196 739 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.09□□□□□ -0.791e-7■□□□□ 10.2
TTC3-216ENST00000479930 TRIM7Q9C029 511 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 MFSD1Q9H3U5 465 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 SPDYE3A6NKU9 549 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 TRAF1Q13077 416 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 AFAP1L2Q8N4X5 818 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 APOL6Q9BWW8 343 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 SUGT1Q9Y2Z0 365 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 GBP6Q6ZN66 633 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 JAKMIP2Q96AA8 810 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 TTC1Q99614 292 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 VCXQ9H320 206 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 CYP46A1Q9Y6A2 500 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 WRNQ14191 1432 aaPredicted RBP eCLIP10.09□□□□□ -0.79
TTC3-216ENST00000479930 STX10O60499 249 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 ZNF804AQ7Z570 1209 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 LNPKQ9C0E8 428 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 S100BP04271 92 aaPredicted RBP10.09□□□□□ -0.79
TTC3-216ENST00000479930 PAFAH1B1P43034 410 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 CCDC87Q9NVE4 849 aa10.09□□□□□ -0.79
TTC3-216ENST00000479930 TYRO3Q06418 890 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 CCDC155Q8N6L0 562 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 MAGEB10Q96LZ2 347 aaPredicted RBP10.08□□□□□ -0.8
TTC3-216ENST00000479930 NSRP1Q9H0G5 558 aaKnown RBP10.08□□□□□ -0.8
TTC3-216ENST00000479930 AMOTL2Q9Y2J4 779 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 HSPA5P11021 654 aaKnown RBP10.08□□□□□ -0.8
TTC3-216ENST00000479930 TNMDQ9H2S6 317 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 STIM2Q9P246 746 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms