RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 NOB1Q9ULX3 412 aaKnown RBP11.23□□□□□ -0.61
DDX56-211ENST00000479602 TRPM7Q96QT4 1865 aa11.23□□□□□ -0.61
DDX56-211ENST00000479602 CCDC152Q4G0S7 254 aa11.22□□□□□ -0.61
DDX56-211ENST00000479602 TBC1D10BQ4KMP7 808 aaPredicted RBP11.22□□□□□ -0.61
DDX56-211ENST00000479602 PODNQ7Z5L7 613 aa11.22□□□□□ -0.61
DDX56-211ENST00000479602 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
DDX56-211ENST00000479602 CHMP4BQ9H444 224 aaKnown RBP11.22□□□□□ -0.61
DDX56-211ENST00000479602 BSDC1Q9NW68 430 aaPredicted RBP11.22□□□□□ -0.61
DDX56-211ENST00000479602 MINPP1Q9UNW1 487 aa11.22□□□□□ -0.61
DDX56-211ENST00000479602 ASTN2O75129 1339 aaPredicted RBP11.21□□□□□ -0.61
DDX56-211ENST00000479602 GRM8O00222 908 aa11.21□□□□□ -0.61
DDX56-211ENST00000479602 CSF1RP07333 972 aa11.21□□□□□ -0.61
DDX56-211ENST00000479602 NOGQ13253 232 aa11.21□□□□□ -0.61
DDX56-211ENST00000479602 RABL6Q3YEC7 729 aaPredicted RBP11.21□□□□□ -0.61
DDX56-211ENST00000479602 RSBN1LQ6PCB5 846 aaPredicted RBP11.21□□□□□ -0.61
DDX56-211ENST00000479602 KRT26Q7Z3Y9 468 aa11.21□□□□□ -0.61
DDX56-211ENST00000479602 GGA1Q9UJY5 639 aa11.21□□□□□ -0.61
DDX56-211ENST00000479602 SCN9AQ15858 1988 aa11.21□□□□□ -0.62
DDX56-211ENST00000479602 XDHP47989 1333 aa11.2□□□□□ -0.62
DDX56-211ENST00000479602 ATP2B4P23634 1241 aa11.2□□□□□ -0.62
DDX56-211ENST00000479602 RRP1P56182 461 aaKnown RBP11.2□□□□□ -0.62
DDX56-211ENST00000479602 HUNKP57058 714 aa11.2□□□□□ -0.62
DDX56-211ENST00000479602 MTX1Q13505 466 aa11.2□□□□□ -0.62
DDX56-211ENST00000479602 RGMBQ6NW40 437 aa11.2□□□□□ -0.62
DDX56-211ENST00000479602 DZIP1LQ8IYY4 767 aaKnown RBP11.2□□□□□ -0.62
DDX56-211ENST00000479602 YTHDC1Q96MU7 727 aaKnown RBP11.2□□□□□ -0.62
DDX56-211ENST00000479602 GBA2Q9HCG7 927 aaPredicted RBP11.2□□□□□ -0.62
DDX56-211ENST00000479602 POLR2AP24928 1970 aaKnown RBP11.19□□□□□ -0.62
DDX56-211ENST00000479602 IRS2Q9Y4H2 1338 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 ADM5C9JUS6 153 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 UFL1O94874 794 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 CTSWP56202 376 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 SCARF1Q14162 830 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 KIF4BQ2VIQ3 1234 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 DACT2Q5SW24 774 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 ANKRD18AQ8IVF6 992 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 CCDC102AQ96A19 550 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 DCPSQ96C86 337 aaKnown RBP11.19□□□□□ -0.62
DDX56-211ENST00000479602 BEGAINQ9BUH8 593 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 USP44Q9H0E7 712 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 GREM2Q9H772 168 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 ANKIB1Q9P2G1 1089 aa11.19□□□□□ -0.62
DDX56-211ENST00000479602 USP17L3A6NCW0 530 aa11.18□□□□□ -0.62
DDX56-211ENST00000479602 USP17L4A6NCW7 530 aa11.18□□□□□ -0.62
DDX56-211ENST00000479602 F6X3S4 739 aa11.18□□□□□ -0.62
DDX56-211ENST00000479602 GNAI3P08754 354 aa11.18□□□□□ -0.62
DDX56-211ENST00000479602 USP17L8P0C7I0 530 aa11.18□□□□□ -0.62
DDX56-211ENST00000479602 CWF19L2Q2TBE0 894 aaKnown RBP11.18□□□□□ -0.62
DDX56-211ENST00000479602 RBM26Q5T8P6 1007 aaKnown RBP11.18□□□□□ -0.62
DDX56-211ENST00000479602 PAXIP1Q6ZW49 1069 aaPredicted RBP11.18□□□□□ -0.62
DDX56-211ENST00000479602 USP17L1Q7RTZ2 530 aa11.18□□□□□ -0.62
DDX56-211ENST00000479602 TXNRD3Q86VQ6 643 aa11.18□□□□□ -0.62
DDX56-211ENST00000479602 ZBED3Q96IU2 234 aaPredicted RBP11.18□□□□□ -0.62
DDX56-211ENST00000479602 CCDC85AQ96PX6 553 aaPredicted RBP11.18□□□□□ -0.62
DDX56-211ENST00000479602 CSRNP1Q96S65 589 aa11.18□□□□□ -0.62
DDX56-211ENST00000479602 SAGE1Q9NXZ1 904 aa11.18□□□□□ -0.62
DDX56-211ENST00000479602 TSKSQ9UJT2 592 aa11.18□□□□□ -0.62
DDX56-211ENST00000479602 DDX19BQ9UMR2 479 aa11.18□□□□□ -0.62
DDX56-211ENST00000479602 PITPNM2Q9BZ72 1349 aa11.17□□□□□ -0.62
DDX56-211ENST00000479602 SLC10A3P09131 477 aa11.17□□□□□ -0.62
DDX56-211ENST00000479602 MMP14P50281 582 aa11.17□□□□□ -0.62
DDX56-211ENST00000479602 FKBP1BP68106 108 aa11.17□□□□□ -0.62
DDX56-211ENST00000479602 KIF23Q02241 960 aaPredicted RBP11.17□□□□□ -0.62
DDX56-211ENST00000479602 GRM1Q13255 1194 aa11.17□□□□□ -0.62
DDX56-211ENST00000479602 MVPQ14764 893 aaKnown RBP11.17□□□□□ -0.62
DDX56-211ENST00000479602 STRIP1Q5VSL9 837 aa11.17□□□□□ -0.62
DDX56-211ENST00000479602 FTSJ3Q8IY81 847 aaKnown RBP11.17□□□□□ -0.62
DDX56-211ENST00000479602 C2orf69Q8N8R5 385 aa11.17□□□□□ -0.62
DDX56-211ENST00000479602 CDCA5Q96FF9 252 aa11.17□□□□□ -0.62
DDX56-211ENST00000479602 CDC5LQ99459 802 aaKnown RBP11.17□□□□□ -0.62
DDX56-211ENST00000479602 ZNF408Q9H9D4 720 aa11.17□□□□□ -0.62
DDX56-211ENST00000479602 MYOZ2Q9NPC6 264 aa11.17□□□□□ -0.62
DDX56-211ENST00000479602 FBXO3Q9UK99 471 aa11.17□□□□□ -0.62
DDX56-211ENST00000479602 LEMD3Q9Y2U8 911 aa11.17□□□□□ -0.62
DDX56-211ENST00000479602 MED23Q9ULK4 1368 aa11.16□□□□□ -0.62
DDX56-211ENST00000479602 ANGEL2Q5VTE6 544 aaKnown RBP11.16□□□□□ -0.62
DDX56-211ENST00000479602 C15orf52Q6ZUT6 534 aaKnown RBP11.16□□□□□ -0.62
DDX56-211ENST00000479602 MCOLN1Q9GZU1 580 aa11.16□□□□□ -0.62
DDX56-211ENST00000479602 COA1Q9GZY4 146 aa11.16□□□□□ -0.62
DDX56-211ENST00000479602 RNF186Q9NXI6 227 aa11.16□□□□□ -0.62
DDX56-211ENST00000479602 GGA3Q9NZ52 723 aa11.16□□□□□ -0.62
DDX56-211ENST00000479602 ZBTB7BO15156 539 aaPredicted RBP11.15□□□□□ -0.62
DDX56-211ENST00000479602 ZBTB22O15209 634 aa11.15□□□□□ -0.62
DDX56-211ENST00000479602 CENPBP07199 599 aaPredicted RBP11.15□□□□□ -0.62
DDX56-211ENST00000479602 RLBP1P12271 317 aa11.15□□□□□ -0.62
DDX56-211ENST00000479602 NBPF9Q3BBW0 867 aa11.15□□□□□ -0.62
DDX56-211ENST00000479602 SULF1Q8IWU6 871 aa11.15□□□□□ -0.62
DDX56-211ENST00000479602 TMEM57Q8N5G2 664 aa11.15□□□□□ -0.62
DDX56-211ENST00000479602 FRAT1Q92837 279 aaPredicted RBP11.15□□□□□ -0.62
DDX56-211ENST00000479602 WNT10BO00744 389 aa11.14□□□□□ -0.63
DDX56-211ENST00000479602 NBPF7P0C2Y1 421 aaPredicted RBP11.14□□□□□ -0.63
DDX56-211ENST00000479602 ZNF157P51786 506 aaPredicted RBP11.14□□□□□ -0.63
DDX56-211ENST00000479602 FOXO4P98177 505 aa11.14□□□□□ -0.63
DDX56-211ENST00000479602 UBE3BQ7Z3V4 1068 aa11.14□□□□□ -0.63
DDX56-211ENST00000479602 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
DDX56-211ENST00000479602 KAZALD1Q96I82 304 aa11.14□□□□□ -0.63
DDX56-211ENST00000479602 MXD3Q9BW11 206 aa11.14□□□□□ -0.63
DDX56-211ENST00000479602 ZBTB40Q9NUA8 1239 aa11.14□□□□□ -0.63
DDX56-211ENST00000479602 C9orf78Q9NZ63 289 aaPredicted RBP11.14□□□□□ -0.63
DDX56-211ENST00000479602 PDE4DIPQ5VU43 2346 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms