RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 WFS1O76024 890 aa8.6□□□□□ -1.03
BRAF-203ENST00000479537 XRCC5P13010 732 aaKnown RBP8.6□□□□□ -1.03
BRAF-203ENST00000479537 CCDC85BQ15834 202 aaPredicted RBP8.6□□□□□ -1.03
BRAF-203ENST00000479537 CCNJLQ8IV13 435 aa8.6□□□□□ -1.03
BRAF-203ENST00000479537 CEP120Q8N960 986 aa8.6□□□□□ -1.03
BRAF-203ENST00000479537 SREK1Q8WXA9 508 aaKnown RBP8.6□□□□□ -1.03
BRAF-203ENST00000479537 TCF12Q99081 682 aa8.6□□□□□ -1.03
BRAF-203ENST00000479537 RASSF4Q9H2L5 321 aa8.6□□□□□ -1.03
BRAF-203ENST00000479537 ACBD3Q9H3P7 528 aa8.6□□□□□ -1.03
BRAF-203ENST00000479537 NSFL1CQ9UNZ2 370 aaKnown RBP8.6□□□□□ -1.03
BRAF-203ENST00000479537 CPB1P15086 417 aa8.59□□□□□ -1.03
BRAF-203ENST00000479537 ATP11AP98196 1134 aa8.59□□□□□ -1.03
BRAF-203ENST00000479537 GNL2Q13823 731 aaKnown RBP8.59□□□□□ -1.03
BRAF-203ENST00000479537 FAM35AQ86V20 835 aa8.59□□□□□ -1.03
BRAF-203ENST00000479537 ZNF654Q8IZM8 581 aa8.59□□□□□ -1.03
BRAF-203ENST00000479537 GPR161Q8N6U8 529 aaKnown RBP8.59□□□□□ -1.03
BRAF-203ENST00000479537 C3orf58Q8NDZ4 430 aa8.59□□□□□ -1.03
BRAF-203ENST00000479537 NANOS1Q8WY41 292 aaKnown RBP8.59□□□□□ -1.03
BRAF-203ENST00000479537 IRF7Q92985 503 aa8.59□□□□□ -1.03
BRAF-203ENST00000479537 HHIPQ96QV1 700 aa8.59□□□□□ -1.03
BRAF-203ENST00000479537 METTL12A8MUP2 240 aa8.58□□□□□ -1.04
BRAF-203ENST00000479537 ZBTB42B2RXF5 422 aa8.58□□□□□ -1.04
BRAF-203ENST00000479537 PDE2AO00408 941 aaPredicted RBP8.58□□□□□ -1.04
BRAF-203ENST00000479537 C2CD2LO14523 706 aa8.58□□□□□ -1.04
BRAF-203ENST00000479537 SIN3BO75182 1162 aa8.58□□□□□ -1.04
BRAF-203ENST00000479537 SMNDC1O75940 238 aaKnown RBP eCLIP8.58□□□□□ -1.04
BRAF-203ENST00000479537 PTPN12Q05209 780 aaKnown RBP8.58□□□□□ -1.04
BRAF-203ENST00000479537 SF3A1Q15459 793 aaKnown RBP8.58□□□□□ -1.04
BRAF-203ENST00000479537 TPTE2Q6XPS3 522 aa8.58□□□□□ -1.04
BRAF-203ENST00000479537 PBX4Q9BYU1 374 aa8.58□□□□□ -1.04
BRAF-203ENST00000479537 PPM1HQ9ULR3 514 aa8.58□□□□□ -1.04
BRAF-203ENST00000479537 INPP5FQ9Y2H2 1132 aa8.58□□□□□ -1.04
BRAF-203ENST00000479537 FAM177BA6PVY3 158 aa8.57□□□□□ -1.04
BRAF-203ENST00000479537 GRIA4P48058 902 aa8.57□□□□□ -1.04
BRAF-203ENST00000479537 MAP3K11Q16584 847 aa8.57□□□□□ -1.04
BRAF-203ENST00000479537 SPRED3Q2MJR0 410 aa8.57□□□□□ -1.04
BRAF-203ENST00000479537 CEP135Q66GS9 1140 aa8.57□□□□□ -1.04
BRAF-203ENST00000479537 TREML4Q6UXN2 200 aa8.57□□□□□ -1.04
BRAF-203ENST00000479537 TMEM102Q8N9M5 508 aaPredicted RBP8.57□□□□□ -1.04
BRAF-203ENST00000479537 DRC1Q96MC2 740 aa8.57□□□□□ -1.04
BRAF-203ENST00000479537 ZFYVE1Q9HBF4 777 aa8.57□□□□□ -1.04
BRAF-203ENST00000479537 DDX41Q9UJV9 622 aaKnown RBP8.57□□□□□ -1.04
BRAF-203ENST00000479537 SLC6A14Q9UN76 642 aa8.57□□□□□ -1.04
BRAF-203ENST00000479537 A0A096LPE4 126 aa8.56□□□□□ -1.04
BRAF-203ENST00000479537 A0A1W2PPZ6 126 aa8.56□□□□□ -1.04
BRAF-203ENST00000479537 ADH6P28332 368 aa8.56□□□□□ -1.04
BRAF-203ENST00000479537 ADH7P40394 386 aa8.56□□□□□ -1.04
BRAF-203ENST00000479537 TNNI2P48788 182 aa8.56□□□□□ -1.04
BRAF-203ENST00000479537 LCE2CQ5TA81 110 aa8.56□□□□□ -1.04
BRAF-203ENST00000479537 ELMSAN1Q6PJG2 1045 aa8.56□□□□□ -1.04
BRAF-203ENST00000479537 NXPE3Q969Y0 559 aa8.56□□□□□ -1.04
BRAF-203ENST00000479537 PLD4Q96BZ4 506 aa8.56□□□□□ -1.04
BRAF-203ENST00000479537 BHLHE41Q9C0J9 482 aaPredicted RBP8.56□□□□□ -1.04
BRAF-203ENST00000479537 AVENQ9NQS1 362 aaPredicted RBP8.56□□□□□ -1.04
BRAF-203ENST00000479537 GPN3Q9UHW5 284 aaPredicted RBP8.56□□□□□ -1.04
BRAF-203ENST00000479537 F6X3S4 739 aa8.55□□□□□ -1.04
BRAF-203ENST00000479537 MAP2K3P46734 347 aa8.55□□□□□ -1.04
BRAF-203ENST00000479537 RELL1Q8IUW5 271 aa8.55□□□□□ -1.04
BRAF-203ENST00000479537 NOC4LQ9BVI4 516 aaKnown RBP8.55□□□□□ -1.04
BRAF-203ENST00000479537 CEP44Q9C0F1 390 aa8.55□□□□□ -1.04
BRAF-203ENST00000479537 COPRSQ9NQ92 184 aa8.55□□□□□ -1.04
BRAF-203ENST00000479537 KBTBD4Q9NVX7 518 aa8.55□□□□□ -1.04
BRAF-203ENST00000479537 NEURL1BA8MQ27 555 aa8.54□□□□□ -1.04
BRAF-203ENST00000479537 NFKBIEO00221 500 aa8.54□□□□□ -1.04
BRAF-203ENST00000479537 VSIG8P0DPA2 414 aa8.54□□□□□ -1.04
BRAF-203ENST00000479537 ARAFP10398 606 aa8.54□□□□□ -1.04
BRAF-203ENST00000479537 GBP2P32456 591 aaPredicted RBP8.54□□□□□ -1.04
BRAF-203ENST00000479537 GMPRP36959 345 aa8.54□□□□□ -1.04
BRAF-203ENST00000479537 RACK1P63244 317 aaKnown RBP8.54□□□□□ -1.04
BRAF-203ENST00000479537 PWP1Q13610 501 aa8.54□□□□□ -1.04
BRAF-203ENST00000479537 GAS6Q14393 721 aa8.54□□□□□ -1.04
BRAF-203ENST00000479537 ERMP1Q7Z2K6 904 aa8.54□□□□□ -1.04
BRAF-203ENST00000479537 TNFRSF25Q93038 417 aa8.54□□□□□ -1.04
BRAF-203ENST00000479537 TINF2Q9BSI4 451 aa8.54□□□□□ -1.04
BRAF-203ENST00000479537 COL25A1Q9BXS0 654 aaPredicted RBP8.54□□□□□ -1.04
BRAF-203ENST00000479537 TANGO6Q9C0B7 1094 aa8.54□□□□□ -1.04
BRAF-203ENST00000479537 SMG9Q9H0W8 520 aaKnown RBP8.54□□□□□ -1.04
BRAF-203ENST00000479537 MBIPQ9NS73 344 aa8.54□□□□□ -1.04
BRAF-203ENST00000479537 PTPRAP18433 802 aa8.53□□□□□ -1.04
BRAF-203ENST00000479537 ITPKAP23677 461 aa8.53□□□□□ -1.04
BRAF-203ENST00000479537 SV2BQ7L1I2 683 aa8.53□□□□□ -1.04
BRAF-203ENST00000479537 POP1Q99575 1024 aaKnown RBP8.53□□□□□ -1.04
BRAF-203ENST00000479537 TRIM56Q9BRZ2 755 aaKnown RBP8.53□□□□□ -1.04
BRAF-203ENST00000479537 LACRTQ9GZZ8 138 aa8.53□□□□□ -1.04
BRAF-203ENST00000479537 MINDY4BA8MYZ0 360 aa8.52□□□□□ -1.05
BRAF-203ENST00000479537 RLBP1P12271 317 aa8.52□□□□□ -1.05
BRAF-203ENST00000479537 DNAJA1P31689 397 aaKnown RBP8.52□□□□□ -1.05
BRAF-203ENST00000479537 ZNF157P51786 506 aaPredicted RBP8.52□□□□□ -1.05
BRAF-203ENST00000479537 PERM1Q5SV97 790 aa8.52□□□□□ -1.05
BRAF-203ENST00000479537 BSNDQ8WZ55 320 aa8.52□□□□□ -1.05
BRAF-203ENST00000479537 MUC3BQ9H195 1237 aa8.52□□□□□ -1.05
BRAF-203ENST00000479537 ZNF576Q9H609 170 aa8.52□□□□□ -1.05
BRAF-203ENST00000479537 SRA1Q9HD15 236 aaKnown RBP8.52□□□□□ -1.05
BRAF-203ENST00000479537 GGA1Q9UJY5 639 aa8.52□□□□□ -1.05
BRAF-203ENST00000479537 NAGPAQ9UK23 515 aa8.52□□□□□ -1.05
BRAF-203ENST00000479537 CELA3AP09093 270 aa8.51□□□□□ -1.05
BRAF-203ENST00000479537 LMNB1P20700 586 aa8.51□□□□□ -1.05
BRAF-203ENST00000479537 ALAS2P22557 587 aa8.51□□□□□ -1.05
BRAF-203ENST00000479537 RNFT1Q5M7Z0 435 aa8.51□□□□□ -1.05
BRAF-203ENST00000479537 PSAPL1Q6NUJ1 521 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms