RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 FOXO4P98177 505 aa22.12■■□□□ 1.13
ECHDC1-216ENST00000479525 SAPCD2Q86UD0 394 aa22.12■■□□□ 1.13
ECHDC1-216ENST00000479525 ZNF594Q96JF6 807 aaPredicted RBP22.12■■□□□ 1.13
ECHDC1-216ENST00000479525 MPHOSPH8Q99549 860 aa22.12■■□□□ 1.13
ECHDC1-216ENST00000479525 MED23Q9ULK4 1368 aa22.12■■□□□ 1.13
ECHDC1-216ENST00000479525 CSF1RP07333 972 aa22.12■■□□□ 1.13
ECHDC1-216ENST00000479525 CHRNDQ07001 517 aa22.12■■□□□ 1.13
ECHDC1-216ENST00000479525 USP17L3A6NCW0 530 aa22.11■■□□□ 1.13
ECHDC1-216ENST00000479525 USP17L4A6NCW7 530 aa22.11■■□□□ 1.13
ECHDC1-216ENST00000479525 USP17L1Q7RTZ2 530 aa22.11■■□□□ 1.13
ECHDC1-216ENST00000479525 DCPSQ96C86 337 aaKnown RBP22.11■■□□□ 1.13
ECHDC1-216ENST00000479525 ZIC5Q96T25 663 aa22.11■■□□□ 1.13
ECHDC1-216ENST00000479525 ANKRD18BA2A2Z9 1011 aa22.1■■□□□ 1.13
ECHDC1-216ENST00000479525 HSPA8P11142 646 aaKnown RBP22.1■■□□□ 1.13
ECHDC1-216ENST00000479525 CTCFP49711 727 aaPredicted RBP22.1■■□□□ 1.13
ECHDC1-216ENST00000479525 ANGEL2Q5VTE6 544 aaKnown RBP22.1■■□□□ 1.13
ECHDC1-216ENST00000479525 LMBR1LQ6UX01 489 aa22.1■■□□□ 1.13
ECHDC1-216ENST00000479525 ZNF804BA4D1E1 1349 aa22.09■■□□□ 1.13
ECHDC1-216ENST00000479525 PLIN1O60240 522 aa22.09■■□□□ 1.13
ECHDC1-216ENST00000479525 SCARF1Q14162 830 aa22.09■■□□□ 1.13
ECHDC1-216ENST00000479525 GMLQ99445 158 aa22.09■■□□□ 1.13
ECHDC1-216ENST00000479525 ECE1P42892 770 aa22.08■■□□□ 1.12
ECHDC1-216ENST00000479525 KCNJ4P48050 445 aa22.08■■□□□ 1.12
ECHDC1-216ENST00000479525 HUNKP57058 714 aa22.08■■□□□ 1.12
ECHDC1-216ENST00000479525 CDCA7LQ96GN5 454 aa22.08■■□□□ 1.12
ECHDC1-216ENST00000479525 MYOZ2Q9NPC6 264 aa22.08■■□□□ 1.12
ECHDC1-216ENST00000479525 GRM8O00222 908 aa22.07■■□□□ 1.12
ECHDC1-216ENST00000479525 ZNF280AP59817 542 aaPredicted RBP22.07■■□□□ 1.12
ECHDC1-216ENST00000479525 PRAMEF18Q5VWM3 479 aa22.07■■□□□ 1.12
ECHDC1-216ENST00000479525 PODNQ7Z5L7 613 aa22.07■■□□□ 1.12
ECHDC1-216ENST00000479525 AGBL3Q8NEM8 1001 aa22.07■■□□□ 1.12
ECHDC1-216ENST00000479525 SUCLG2Q96I99 432 aa22.07■■□□□ 1.12
ECHDC1-216ENST00000479525 C9orf78Q9NZ63 289 aaPredicted RBP22.07■■□□□ 1.12
ECHDC1-216ENST00000479525 CASP8AP2Q9UKL3 1982 aa22.07■■□□□ 1.12
ECHDC1-216ENST00000479525 USP17L8P0C7I0 530 aa22.06■■□□□ 1.12
ECHDC1-216ENST00000479525 IFIT5Q13325 482 aaKnown RBP22.06■■□□□ 1.12
ECHDC1-216ENST00000479525 NBPF9Q3BBW0 867 aa22.06■■□□□ 1.12
ECHDC1-216ENST00000479525 DACT2Q5SW24 774 aa22.06■■□□□ 1.12
ECHDC1-216ENST00000479525 JAG2Q9Y219 1238 aa22.06■■□□□ 1.12
ECHDC1-216ENST00000479525 LEMD3Q9Y2U8 911 aa22.06■■□□□ 1.12
ECHDC1-216ENST00000479525 SASH1O94885 1247 aa22.05■■□□□ 1.12
ECHDC1-216ENST00000479525 MAP2K1Q02750 393 aaPredicted RBP22.05■■□□□ 1.12
ECHDC1-216ENST00000479525 SULF1Q8IWU6 871 aa22.05■■□□□ 1.12
ECHDC1-216ENST00000479525 MRPL50Q8N5N7 158 aaKnown RBP22.05■■□□□ 1.12
ECHDC1-216ENST00000479525 CDCA5Q96FF9 252 aa22.05■■□□□ 1.12
ECHDC1-216ENST00000479525 SRCIN1Q9C0H9 1055 aa22.05■■□□□ 1.12
ECHDC1-216ENST00000479525 GBA2Q9HCG7 927 aaPredicted RBP22.05■■□□□ 1.12
ECHDC1-216ENST00000479525 GTF2IP78347 998 aa22.04■■□□□ 1.12
ECHDC1-216ENST00000479525 ANKRD2Q9GZV1 360 aa22.04■■□□□ 1.12
ECHDC1-216ENST00000479525 ZNF609O15014 1411 aa22.04■■□□□ 1.12
ECHDC1-216ENST00000479525 NBPF7P0C2Y1 421 aaPredicted RBP22.03■■□□□ 1.12
ECHDC1-216ENST00000479525 TAF7LQ5H9L4 462 aa22.03■■□□□ 1.12
ECHDC1-216ENST00000479525 MOB2Q70IA6 237 aa22.03■■□□□ 1.12
ECHDC1-216ENST00000479525 KIAA0825Q8IV33 1275 aa22.03■■□□□ 1.12
ECHDC1-216ENST00000479525 COA1Q9GZY4 146 aa22.03■■□□□ 1.12
ECHDC1-216ENST00000479525 PRDM10Q9NQV6 1147 aa22.03■■□□□ 1.12
ECHDC1-216ENST00000479525 TTLL5Q6EMB2 1281 aa22.02■■□□□ 1.12
ECHDC1-216ENST00000479525 SSH1Q8WYL5 1049 aa22.02■■□□□ 1.12
ECHDC1-216ENST00000479525 KAZALD1Q96I82 304 aa22.02■■□□□ 1.12
ECHDC1-216ENST00000479525 PCDHAC2Q9Y5I4 1007 aa22.02■■□□□ 1.12
ECHDC1-216ENST00000479525 C2orf69Q8N8R5 385 aa22.01■■□□□ 1.11
ECHDC1-216ENST00000479525 PUS3Q9BZE2 481 aaKnown RBP22.01■■□□□ 1.11
ECHDC1-216ENST00000479525 IRS2Q9Y4H2 1338 aa22.01■■□□□ 1.11
ECHDC1-216ENST00000479525 F8W031 263 aaPredicted RBP22■■□□□ 1.11
ECHDC1-216ENST00000479525 SLFN5Q08AF3 891 aa22■■□□□ 1.11
ECHDC1-216ENST00000479525 CCDC57Q2TAC2 916 aa22■■□□□ 1.11
ECHDC1-216ENST00000479525 BEGAINQ9BUH8 593 aa22■■□□□ 1.11
ECHDC1-216ENST00000479525 CD209Q9NNX6 404 aa22■■□□□ 1.11
ECHDC1-216ENST00000479525 CNNM1Q9NRU3 951 aa22■■□□□ 1.11
ECHDC1-216ENST00000479525 ECM29Q5VYK3 1845 aa22■■□□□ 1.11
ECHDC1-216ENST00000479525 ALDH1L1O75891 902 aa21.99■■□□□ 1.11
ECHDC1-216ENST00000479525 STRIP1Q5VSL9 837 aa21.99■■□□□ 1.11
ECHDC1-216ENST00000479525 LDHAL6AQ6ZMR3 332 aa21.99■■□□□ 1.11
ECHDC1-216ENST00000479525 AKAP11Q9UKA4 1901 aa21.99■■□□□ 1.11
ECHDC1-216ENST00000479525 E9PSI1 815 aa21.99■■□□□ 1.11
ECHDC1-216ENST00000479525 WNT10BO00744 389 aa21.99■■□□□ 1.11
ECHDC1-216ENST00000479525 RGMBQ6NW40 437 aa21.99■■□□□ 1.11
ECHDC1-216ENST00000479525 CERS5Q8N5B7 392 aa21.99■■□□□ 1.11
ECHDC1-216ENST00000479525 BICC1Q9H694 974 aaKnown RBP21.99■■□□□ 1.11
ECHDC1-216ENST00000479525 FAM155AB1AL88 458 aaPredicted RBP21.98■■□□□ 1.11
ECHDC1-216ENST00000479525 MAP2K2P36507 400 aa21.98■■□□□ 1.11
ECHDC1-216ENST00000479525 ZNF157P51786 506 aaPredicted RBP21.98■■□□□ 1.11
ECHDC1-216ENST00000479525 HHIPL1Q96JK4 782 aa21.98■■□□□ 1.11
ECHDC1-216ENST00000479525 PAPPA2Q9BXP8 1791 aa21.97■■□□□ 1.11
ECHDC1-216ENST00000479525 PRKG1Q13976 671 aa21.97■■□□□ 1.11
ECHDC1-216ENST00000479525 KLHDC4Q8TBB5 520 aa21.97■■□□□ 1.11
ECHDC1-216ENST00000479525 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.97■■□□□ 1.11
ECHDC1-216ENST00000479525 FZD1Q9UP38 647 aa21.97■■□□□ 1.11
ECHDC1-216ENST00000479525 OGFOD1Q8N543 542 aa21.96■■□□□ 1.11
ECHDC1-216ENST00000479525 AOX1Q06278 1338 aa21.95■■□□□ 1.1
ECHDC1-216ENST00000479525 GYG1P46976 350 aa21.95■■□□□ 1.1
ECHDC1-216ENST00000479525 LRRC24Q50LG9 513 aa21.95■■□□□ 1.1
ECHDC1-216ENST00000479525 ANKRD44Q8N8A2 993 aa21.95■■□□□ 1.1
ECHDC1-216ENST00000479525 MYO3BQ8WXR4 1341 aa21.94■■□□□ 1.1
ECHDC1-216ENST00000479525 UBE2Q2LH0YL09 131 aa21.94■■□□□ 1.1
ECHDC1-216ENST00000479525 KIF23Q02241 960 aaPredicted RBP21.94■■□□□ 1.1
ECHDC1-216ENST00000479525 SMC4Q9NTJ3 1288 aa21.94■■□□□ 1.1
ECHDC1-216ENST00000479525 ARAP2Q8WZ64 1704 aa21.94■■□□□ 1.1
ECHDC1-216ENST00000479525 PITPNM2Q9BZ72 1349 aa21.93■■□□□ 1.1
ECHDC1-216ENST00000479525 BRPF1P55201 1214 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms