RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	CXCL9	Q07325	125 aa		11.8	□□□□□ -0.52
SFI1-222	ENST00000478887	DOK7	Q18PE1	504 aa		11.8	□□□□□ -0.52
SFI1-222	ENST00000478887	TXNRD3	Q86VQ6	643 aa		11.8	□□□□□ -0.52
SFI1-222	ENST00000478887	SIL1	Q9H173	461 aa		11.8	□□□□□ -0.52
SFI1-222	ENST00000478887	NMRK2	Q9NPI5	230 aa		11.8	□□□□□ -0.52
SFI1-222	ENST00000478887	KIF3C	O14782	793 aa		11.79	□□□□□ -0.52
SFI1-222	ENST00000478887	FGFR2	P21802	821 aa		11.79	□□□□□ -0.52
SFI1-222	ENST00000478887	CIAPIN1	Q6FI81	312 aa		11.79	□□□□□ -0.52
SFI1-222	ENST00000478887	PODN	Q7Z5L7	613 aa		11.79	□□□□□ -0.52
SFI1-222	ENST00000478887	COA1	Q9GZY4	146 aa		11.79	□□□□□ -0.52
SFI1-222	ENST00000478887	POTEC	B2RU33	542 aa		11.78	□□□□□ -0.52
SFI1-222	ENST00000478887	RAD17	O75943	681 aa		11.78	□□□□□ -0.52
SFI1-222	ENST00000478887	TNIP1	Q15025	636 aa		11.78	□□□□□ -0.52
SFI1-222	ENST00000478887	PUM3	Q15397	648 aa	Known RBP	11.78	□□□□□ -0.52
SFI1-222	ENST00000478887	RNF216	Q9NWF9	866 aa	Predicted RBP	11.78	□□□□□ -0.52
SFI1-222	ENST00000478887	IQCA1L	A6NCM1	817 aa		11.77	□□□□□ -0.53
SFI1-222	ENST00000478887		G3V3G9	751 aa		11.77	□□□□□ -0.53
SFI1-222	ENST00000478887	PSMD14	O00487	310 aa		11.77	□□□□□ -0.53
SFI1-222	ENST00000478887	VEGFA	P15692	232 aa	Predicted RBP	11.77	□□□□□ -0.53
SFI1-222	ENST00000478887	SCNN1D	P51172	638 aa		11.77	□□□□□ -0.53
SFI1-222	ENST00000478887	DCAF8	Q5TAQ9	597 aa		11.77	□□□□□ -0.53
SFI1-222	ENST00000478887	ZNF804A	Q7Z570	1209 aa		11.77	□□□□□ -0.53
SFI1-222	ENST00000478887	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.77	□□□□□ -0.53
SFI1-222	ENST00000478887	LPIN2	Q92539	896 aa		11.77	□□□□□ -0.53
SFI1-222	ENST00000478887	CD209	Q9NNX6	404 aa		11.77	□□□□□ -0.53
SFI1-222	ENST00000478887	CEP126	Q9P2H0	1117 aa		11.77	□□□□□ -0.53
SFI1-222	ENST00000478887	NOP58	Q9Y2X3	529 aa	Known RBP	11.77	□□□□□ -0.53
SFI1-222	ENST00000478887	ZNF646	O15015	1829 aa	Predicted RBP	11.76	□□□□□ -0.53
SFI1-222	ENST00000478887	PSME4	Q14997	1843 aa		11.76	□□□□□ -0.53
SFI1-222	ENST00000478887	SCN9A	Q15858	1988 aa		11.76	□□□□□ -0.53
SFI1-222	ENST00000478887	VIL1	P09327	827 aa	Known RBP	11.76	□□□□□ -0.53
SFI1-222	ENST00000478887	IFIT1	P09914	478 aa	Known RBP	11.76	□□□□□ -0.53
SFI1-222	ENST00000478887	IL1R1	P14778	569 aa		11.76	□□□□□ -0.53
SFI1-222	ENST00000478887	SIRT2	Q8IXJ6	389 aa		11.76	□□□□□ -0.53
SFI1-222	ENST00000478887	RRAGC	Q9HB90	399 aa		11.76	□□□□□ -0.53
SFI1-222	ENST00000478887	KCNQ5	Q9NR82	932 aa		11.76	□□□□□ -0.53
SFI1-222	ENST00000478887	GJA3	Q9Y6H8	435 aa		11.76	□□□□□ -0.53
SFI1-222	ENST00000478887	ARAP2	Q8WZ64	1704 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	SCN4A	P35499	1836 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	USP17L3	A6NCW0	530 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	USP17L4	A6NCW7	530 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	HMMR	O75330	724 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	SLC5A1	P13866	664 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	RPS12	P25398	132 aa	Known RBP	11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	GYG1	P46976	350 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	GMPS	P49915	693 aa	Predicted RBP	11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	ATP2B3	Q16720	1220 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	STRIP1	Q5VSL9	837 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	USP17L1	Q7RTZ2	530 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	FBXO33	Q7Z6M2	555 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	DPF2	Q92785	391 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	FAM84B	Q96KN1	310 aa	Predicted RBP	11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	CRBN	Q96SW2	442 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	GPRC5D	Q9NZD1	345 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	HACL1	Q9UJ83	578 aa		11.75	□□□□□ -0.53
SFI1-222	ENST00000478887	SURF6	O75683	361 aa	Known RBP	11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	SASH1	O94885	1247 aa		11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	LMOD1	P29536	600 aa	Predicted RBP	11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	HIBADH	P31937	336 aa	Known RBP	11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	TFCP2	Q12800	502 aa		11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	DACT2	Q5SW24	774 aa		11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	AGBL3	Q8NEM8	1001 aa		11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	TDRD7	Q8NHU6	1098 aa	Known RBP	11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	GML	Q99445	158 aa		11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	AKAP2	Q9Y2D5	859 aa		11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	ADAMTSL1	Q8N6G6	1762 aa		11.74	□□□□□ -0.53
SFI1-222	ENST00000478887	ZBTB22	O15209	634 aa		11.73	□□□□□ -0.53
SFI1-222	ENST00000478887	EPHX2	P34913	555 aa		11.73	□□□□□ -0.53
SFI1-222	ENST00000478887	EPS15	P42566	896 aa		11.73	□□□□□ -0.53
SFI1-222	ENST00000478887	CAVIN4	Q5BKX8	364 aa		11.73	□□□□□ -0.53
SFI1-222	ENST00000478887	FAM205A	Q6ZU69	1335 aa		11.73	□□□□□ -0.53
SFI1-222	ENST00000478887	MYO3B	Q8WXR4	1341 aa		11.73	□□□□□ -0.53
SFI1-222	ENST00000478887	GPR108	Q9NPR9	543 aa		11.73	□□□□□ -0.53
SFI1-222	ENST00000478887	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.73	□□□□□ -0.53
SFI1-222	ENST00000478887	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.73	□□□□□ -0.53
SFI1-222	ENST00000478887		A0A1B0GUL7	405 aa		11.72	□□□□□ -0.53
SFI1-222	ENST00000478887	TOMM70	O94826	608 aa		11.72	□□□□□ -0.53
SFI1-222	ENST00000478887	BCAM	P50895	628 aa		11.72	□□□□□ -0.53
SFI1-222	ENST00000478887	FKBP1A	P62942	108 aa	Known RBP	11.72	□□□□□ -0.53
SFI1-222	ENST00000478887	GTF2I	P78347	998 aa		11.72	□□□□□ -0.53
SFI1-222	ENST00000478887	OS9	Q13438	667 aa	Predicted RBP	11.72	□□□□□ -0.53
SFI1-222	ENST00000478887	HSP90AB4P	Q58FF6	505 aa		11.72	□□□□□ -0.53
SFI1-222	ENST00000478887	TTLL5	Q6EMB2	1281 aa		11.72	□□□□□ -0.53
SFI1-222	ENST00000478887	RBM46	Q8TBY0	533 aa	Known RBP	11.72	□□□□□ -0.53
SFI1-222	ENST00000478887	EXOC6B	Q9Y2D4	811 aa		11.72	□□□□□ -0.53
SFI1-222	ENST00000478887	COL1A1	P02452	1464 aa	Predicted RBP	11.71	□□□□□ -0.53
SFI1-222	ENST00000478887	ADORA1	P30542	326 aa		11.71	□□□□□ -0.53
SFI1-222	ENST00000478887	AAMP	Q13685	434 aa		11.71	□□□□□ -0.53
SFI1-222	ENST00000478887	TNNI3K	Q59H18	835 aa		11.71	□□□□□ -0.53
SFI1-222	ENST00000478887	PNMA8A	Q86V59	439 aa	Predicted RBP	11.71	□□□□□ -0.53
SFI1-222	ENST00000478887	VPS37D	Q86XT2	251 aa		11.71	□□□□□ -0.53
SFI1-222	ENST00000478887	ERC1	Q8IUD2	1116 aa		11.71	□□□□□ -0.53
SFI1-222	ENST00000478887	MICALL2	Q8IY33	904 aa		11.71	□□□□□ -0.53
SFI1-222	ENST00000478887	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.71	□□□□□ -0.53
SFI1-222	ENST00000478887	ADARB2	Q9NS39	739 aa	Known RBP	11.71	□□□□□ -0.53
SFI1-222	ENST00000478887	CNOT7	Q9UIV1	285 aa	Known RBP	11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms