RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 TRPM7Q96QT4 1865 aa17.8■□□□□ 0.44
PDE6D-204ENST00000477748 ZBED9Q6R2W3 1325 aa17.79■□□□□ 0.44
PDE6D-204ENST00000477748 TAF7LQ5H9L4 462 aa17.79■□□□□ 0.44
PDE6D-204ENST00000477748 WBP1LQ9NX94 342 aa17.79■□□□□ 0.44
PDE6D-204ENST00000477748 MED23Q9ULK4 1368 aa17.79■□□□□ 0.44
PDE6D-204ENST00000477748 KIF16BQ96L93 1317 aa17.78■□□□□ 0.44
PDE6D-204ENST00000477748 CTCFP49711 727 aaPredicted RBP17.78■□□□□ 0.44
PDE6D-204ENST00000477748 CCT4P50991 539 aaKnown RBP17.78■□□□□ 0.44
PDE6D-204ENST00000477748 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
PDE6D-204ENST00000477748 PAXIP1Q6ZW49 1069 aaPredicted RBP17.78■□□□□ 0.44
PDE6D-204ENST00000477748 SAPCD2Q86UD0 394 aa17.78■□□□□ 0.44
PDE6D-204ENST00000477748 KAZALD1Q96I82 304 aa17.78■□□□□ 0.44
PDE6D-204ENST00000477748 HHIPL1Q96JK4 782 aa17.78■□□□□ 0.44
PDE6D-204ENST00000477748 CAPNS2Q96L46 248 aa17.78■□□□□ 0.44
PDE6D-204ENST00000477748 ANKRD2Q9GZV1 360 aa17.78■□□□□ 0.44
PDE6D-204ENST00000477748 KCNQ5Q9NR82 932 aa17.78■□□□□ 0.44
PDE6D-204ENST00000477748 THSD7BQ9C0I4 1608 aa17.78■□□□□ 0.44
PDE6D-204ENST00000477748 TBC1D10BQ4KMP7 808 aaPredicted RBP17.77■□□□□ 0.44
PDE6D-204ENST00000477748 RSBN1LQ6PCB5 846 aaPredicted RBP17.77■□□□□ 0.44
PDE6D-204ENST00000477748 SAMD7Q7Z3H4 446 aa17.77■□□□□ 0.44
PDE6D-204ENST00000477748 PODNQ7Z5L7 613 aa17.77■□□□□ 0.44
PDE6D-204ENST00000477748 AGBL3Q8NEM8 1001 aa17.77■□□□□ 0.44
PDE6D-204ENST00000477748 USP44Q9H0E7 712 aa17.77■□□□□ 0.44
PDE6D-204ENST00000477748 PCDH10Q9P2E7 1040 aa17.77■□□□□ 0.44
PDE6D-204ENST00000477748 LEMD3Q9Y2U8 911 aa17.77■□□□□ 0.44
PDE6D-204ENST00000477748 SCN9AQ15858 1988 aa17.77■□□□□ 0.43
PDE6D-204ENST00000477748 WTIPA6NIX2 430 aaPredicted RBP17.76■□□□□ 0.43
PDE6D-204ENST00000477748 CHRNDQ07001 517 aa17.76■□□□□ 0.43
PDE6D-204ENST00000477748 KIF4BQ2VIQ3 1234 aa17.76■□□□□ 0.43
PDE6D-204ENST00000477748 ARHGAP45Q92619 1136 aa17.76■□□□□ 0.43
PDE6D-204ENST00000477748 ZNF594Q96JF6 807 aaPredicted RBP17.76■□□□□ 0.43
PDE6D-204ENST00000477748 BICC1Q9H694 974 aaKnown RBP17.76■□□□□ 0.43
PDE6D-204ENST00000477748 USP17L3A6NCW0 530 aa17.75■□□□□ 0.43
PDE6D-204ENST00000477748 USP17L4A6NCW7 530 aa17.75■□□□□ 0.43
PDE6D-204ENST00000477748 IPO8O15397 1037 aaKnown RBP17.75■□□□□ 0.43
PDE6D-204ENST00000477748 BCAR3O75815 825 aa17.75■□□□□ 0.43
PDE6D-204ENST00000477748 KCNJ4P48050 445 aa17.75■□□□□ 0.43
PDE6D-204ENST00000477748 ZNF280AP59817 542 aaPredicted RBP17.75■□□□□ 0.43
PDE6D-204ENST00000477748 LDHAL6AQ6ZMR3 332 aa17.75■□□□□ 0.43
PDE6D-204ENST00000477748 USP17L1Q7RTZ2 530 aa17.75■□□□□ 0.43
PDE6D-204ENST00000477748 KRT26Q7Z3Y9 468 aa17.75■□□□□ 0.43
PDE6D-204ENST00000477748 DCPSQ96C86 337 aaKnown RBP17.75■□□□□ 0.43
PDE6D-204ENST00000477748 ZNF408Q9H9D4 720 aa17.75■□□□□ 0.43
PDE6D-204ENST00000477748 CNNM1Q9NRU3 951 aa17.75■□□□□ 0.43
PDE6D-204ENST00000477748 ZNF804BA4D1E1 1349 aa17.74■□□□□ 0.43
PDE6D-204ENST00000477748 A0A1B0GUL6 1792 aa17.74■□□□□ 0.43
PDE6D-204ENST00000477748 EGFRP00533 1210 aa17.74■□□□□ 0.43
PDE6D-204ENST00000477748 RABL6Q3YEC7 729 aaPredicted RBP17.74■□□□□ 0.43
PDE6D-204ENST00000477748 CYP4F22Q6NT55 531 aa17.74■□□□□ 0.43
PDE6D-204ENST00000477748 USP48Q86UV5 1035 aa17.74■□□□□ 0.43
PDE6D-204ENST00000477748 ANKRD44Q8N8A2 993 aa17.74■□□□□ 0.43
PDE6D-204ENST00000477748 FRAT1Q92837 279 aaPredicted RBP17.74■□□□□ 0.43
PDE6D-204ENST00000477748 TAF5LO75529 589 aa17.73■□□□□ 0.43
PDE6D-204ENST00000477748 MAP2K2P36507 400 aa17.73■□□□□ 0.43
PDE6D-204ENST00000477748 HELBQ8NG08 1087 aaPredicted RBP17.73■□□□□ 0.43
PDE6D-204ENST00000477748 BEGAINQ9BUH8 593 aa17.73■□□□□ 0.43
PDE6D-204ENST00000477748 COA1Q9GZY4 146 aa17.73■□□□□ 0.43
PDE6D-204ENST00000477748 PSME4Q14997 1843 aa17.72■□□□□ 0.43
PDE6D-204ENST00000477748 PLIN1O60240 522 aa17.72■□□□□ 0.43
PDE6D-204ENST00000477748 USP17L8P0C7I0 530 aa17.72■□□□□ 0.43
PDE6D-204ENST00000477748 UBTFL1P0CB47 393 aaPredicted RBP17.72■□□□□ 0.43
PDE6D-204ENST00000477748 GRM1Q13255 1194 aa17.72■□□□□ 0.43
PDE6D-204ENST00000477748 RBM26Q5T8P6 1007 aaKnown RBP17.72■□□□□ 0.43
PDE6D-204ENST00000477748 SULF1Q8IWU6 871 aa17.72■□□□□ 0.43
PDE6D-204ENST00000477748 GMLQ99445 158 aa17.72■□□□□ 0.43
PDE6D-204ENST00000477748 GGA3Q9NZ52 723 aa17.72■□□□□ 0.43
PDE6D-204ENST00000477748 MYO3BQ8WXR4 1341 aa17.72■□□□□ 0.43
PDE6D-204ENST00000477748 LBX1P52954 281 aa17.71■□□□□ 0.43
PDE6D-204ENST00000477748 TXNRD3Q86VQ6 643 aa17.71■□□□□ 0.43
PDE6D-204ENST00000477748 ABHD8Q96I13 439 aa17.71■□□□□ 0.43
PDE6D-204ENST00000477748 SNAP23O00161 211 aa17.7■□□□□ 0.42
PDE6D-204ENST00000477748 HSPA8P11142 646 aaKnown RBP17.7■□□□□ 0.42
PDE6D-204ENST00000477748 TRIM27P14373 513 aa17.7■□□□□ 0.42
PDE6D-204ENST00000477748 KLRK1P26718 216 aa17.7■□□□□ 0.42
PDE6D-204ENST00000477748 MMP14P50281 582 aa17.7■□□□□ 0.42
PDE6D-204ENST00000477748 STRIP1Q5VSL9 837 aa17.7■□□□□ 0.42
PDE6D-204ENST00000477748 INTS3Q68E01 1043 aaKnown RBP17.7■□□□□ 0.42
PDE6D-204ENST00000477748 ATF7IPQ6VMQ6 1270 aa17.7■□□□□ 0.42
PDE6D-204ENST00000477748 PUS3Q9BZE2 481 aaKnown RBP17.7■□□□□ 0.42
PDE6D-204ENST00000477748 MYOZ2Q9NPC6 264 aa17.7■□□□□ 0.42
PDE6D-204ENST00000477748 HDAC5Q9UQL6 1122 aa17.7■□□□□ 0.42
PDE6D-204ENST00000477748 ADM5C9JUS6 153 aa17.69■□□□□ 0.42
PDE6D-204ENST00000477748 CA12O43570 354 aa17.69■□□□□ 0.42
PDE6D-204ENST00000477748 HUNKP57058 714 aa17.69■□□□□ 0.42
PDE6D-204ENST00000477748 DACT2Q5SW24 774 aa17.69■□□□□ 0.42
PDE6D-204ENST00000477748 ZKSCAN2Q63HK3 967 aa17.69■□□□□ 0.42
PDE6D-204ENST00000477748 GBA2Q9HCG7 927 aaPredicted RBP17.69■□□□□ 0.42
PDE6D-204ENST00000477748 TNNQ9UQP3 1299 aa17.69■□□□□ 0.42
PDE6D-204ENST00000477748 PITPNM2Q9BZ72 1349 aa17.69■□□□□ 0.42
PDE6D-204ENST00000477748 NOGQ13253 232 aa17.68■□□□□ 0.42
PDE6D-204ENST00000477748 SCARF1Q14162 830 aa17.68■□□□□ 0.42
PDE6D-204ENST00000477748 OGFOD1Q8N543 542 aa17.68■□□□□ 0.42
PDE6D-204ENST00000477748 C2orf69Q8N8R5 385 aa17.68■□□□□ 0.42
PDE6D-204ENST00000477748 FBXW7Q969H0 707 aa17.68■□□□□ 0.42
PDE6D-204ENST00000477748 CLUAP1Q96AJ1 413 aa17.68■□□□□ 0.42
PDE6D-204ENST00000477748 MEIS3Q99687 375 aa17.68■□□□□ 0.42
PDE6D-204ENST00000477748 AOC2O75106 756 aa17.67■□□□□ 0.42
PDE6D-204ENST00000477748 ANGEL2Q5VTE6 544 aaKnown RBP17.67■□□□□ 0.42
PDE6D-204ENST00000477748 C15orf52Q6ZUT6 534 aaKnown RBP17.67■□□□□ 0.42
PDE6D-204ENST00000477748 KLHDC4Q8TBB5 520 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms