RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 USP17L1Q7RTZ2 530 aa15.5■□□□□ 0.07
HDAC6-219ENST00000476625 CCDC191Q8NCU4 936 aa15.5■□□□□ 0.07
HDAC6-219ENST00000476625 METTL22Q9BUU2 404 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-219ENST00000476625 ECM29Q5VYK3 1845 aa15.5■□□□□ 0.07
HDAC6-219ENST00000476625 CTSWP56202 376 aa15.49■□□□□ 0.07
HDAC6-219ENST00000476625 DACT2Q5SW24 774 aa15.49■□□□□ 0.07
HDAC6-219ENST00000476625 G2E3Q7L622 706 aa15.49■□□□□ 0.07
HDAC6-219ENST00000476625 ZNF296Q8WUU4 475 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-219ENST00000476625 PCDHAC2Q9Y5I4 1007 aa15.49■□□□□ 0.07
HDAC6-219ENST00000476625 SNAP23O00161 211 aa15.48■□□□□ 0.07
HDAC6-219ENST00000476625 ATP2B4P23634 1241 aa15.48■□□□□ 0.07
HDAC6-219ENST00000476625 TTLL12Q14166 644 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-219ENST00000476625 TTLL11Q8NHH1 800 aa15.48■□□□□ 0.07
HDAC6-219ENST00000476625 TSR2Q969E8 191 aaKnown RBP15.48■□□□□ 0.07
HDAC6-219ENST00000476625 MINPP1Q9UNW1 487 aa15.48■□□□□ 0.07
HDAC6-219ENST00000476625 MED23Q9ULK4 1368 aa15.48■□□□□ 0.07
HDAC6-219ENST00000476625 PITPNM2Q9BZ72 1349 aa15.47■□□□□ 0.07
HDAC6-219ENST00000476625 WNT10BO00744 389 aa15.47■□□□□ 0.07
HDAC6-219ENST00000476625 IFT57Q9NWB7 429 aa15.47■□□□□ 0.07
HDAC6-219ENST00000476625 OTOFQ9HC10 1997 aa15.47■□□□□ 0.07
HDAC6-219ENST00000476625 LAMB1P07942 1786 aa15.47■□□□□ 0.07
HDAC6-219ENST00000476625 AOX1Q06278 1338 aa15.46■□□□□ 0.07
HDAC6-219ENST00000476625 SSC5DA1L4H1 1573 aa15.46■□□□□ 0.07
HDAC6-219ENST00000476625 PI4KAP2A4QPH2 592 aa15.46■□□□□ 0.07
HDAC6-219ENST00000476625 CCT4P50991 539 aaKnown RBP15.46■□□□□ 0.07
HDAC6-219ENST00000476625 PTPN12Q05209 780 aaKnown RBP15.46■□□□□ 0.07
HDAC6-219ENST00000476625 PI4KAP1Q8N8J0 262 aa15.46■□□□□ 0.07
HDAC6-219ENST00000476625 PODNQ7Z5L7 613 aa15.45■□□□□ 0.06
HDAC6-219ENST00000476625 KIAA0825Q8IV33 1275 aa15.45■□□□□ 0.06
HDAC6-219ENST00000476625 HDAC9Q9UKV0 1011 aa15.45■□□□□ 0.06
HDAC6-219ENST00000476625 GNAI1P63096 354 aa15.44■□□□□ 0.06
HDAC6-219ENST00000476625 CCDC184Q52MB2 194 aa15.44■□□□□ 0.06
HDAC6-219ENST00000476625 UBE3BQ7Z3V4 1068 aa15.44■□□□□ 0.06
HDAC6-219ENST00000476625 NEURL1BA8MQ27 555 aa15.43■□□□□ 0.06
HDAC6-219ENST00000476625 GPR25O00155 361 aa15.43■□□□□ 0.06
HDAC6-219ENST00000476625 FKBP1BP68106 108 aa15.43■□□□□ 0.06
HDAC6-219ENST00000476625 KSR2Q6VAB6 950 aa15.43■□□□□ 0.06
HDAC6-219ENST00000476625 CDC5LQ99459 802 aaKnown RBP15.43■□□□□ 0.06
HDAC6-219ENST00000476625 BSDC1Q9NW68 430 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-219ENST00000476625 JAG2Q9Y219 1238 aa15.43■□□□□ 0.06
HDAC6-219ENST00000476625 ZSWIM8A7E2V4 1837 aa15.43■□□□□ 0.06
HDAC6-219ENST00000476625 DDX58O95786 925 aaKnown RBP15.42■□□□□ 0.06
HDAC6-219ENST00000476625 GTF2IP78347 998 aa15.42■□□□□ 0.06
HDAC6-219ENST00000476625 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
HDAC6-219ENST00000476625 CERS5Q8N5B7 392 aa15.42■□□□□ 0.06
HDAC6-219ENST00000476625 CLMNQ96JQ2 1002 aa15.42■□□□□ 0.06
HDAC6-219ENST00000476625 PRKRIP1Q9H875 184 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-219ENST00000476625 F8W031 263 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-219ENST00000476625 TM4SF4P48230 202 aa15.41■□□□□ 0.06
HDAC6-219ENST00000476625 HELBQ8NG08 1087 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-219ENST00000476625 ANGEL1Q9UNK9 670 aaKnown RBP15.41■□□□□ 0.06
HDAC6-219ENST00000476625 PDE4DIPQ5VU43 2346 aa15.41■□□□□ 0.06
HDAC6-219ENST00000476625 ZNF804BA4D1E1 1349 aa15.41■□□□□ 0.06
HDAC6-219ENST00000476625 H7C1W4 665 aa15.4■□□□□ 0.06
HDAC6-219ENST00000476625 TAF5LO75529 589 aa15.4■□□□□ 0.06
HDAC6-219ENST00000476625 ITGA6P23229 1130 aa15.4■□□□□ 0.06
HDAC6-219ENST00000476625 CASP7P55210 303 aa15.4■□□□□ 0.06
HDAC6-219ENST00000476625 CAP1Q01518 475 aa15.4■□□□□ 0.06
HDAC6-219ENST00000476625 STRIP1Q5VSL9 837 aa15.4■□□□□ 0.06
HDAC6-219ENST00000476625 PRPF38BQ5VTL8 546 aaKnown RBP15.4■□□□□ 0.06
HDAC6-219ENST00000476625 TTLL5Q6EMB2 1281 aa15.4■□□□□ 0.06
HDAC6-219ENST00000476625 ZBED3Q96IU2 234 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-219ENST00000476625 COA1Q9GZY4 146 aa15.4■□□□□ 0.06
HDAC6-219ENST00000476625 IRS2Q9Y4H2 1338 aa15.4■□□□□ 0.06
HDAC6-219ENST00000476625 CLRN2A0PK11 232 aa15.39■□□□□ 0.05
HDAC6-219ENST00000476625 HSP90B1P14625 803 aaKnown RBP15.39■□□□□ 0.05
HDAC6-219ENST00000476625 REM2Q8IYK8 340 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-219ENST00000476625 OGFOD1Q8N543 542 aa15.39■□□□□ 0.05
HDAC6-219ENST00000476625 ARAP2Q8WZ64 1704 aa15.38■□□□□ 0.05
HDAC6-219ENST00000476625 POTEFA5A3E0 1075 aa15.38■□□□□ 0.05
HDAC6-219ENST00000476625 IGF2BP3O00425 579 aaKnown RBP eCLIP15.38■□□□□ 0.05
HDAC6-219ENST00000476625 IGHMBP2P38935 993 aaKnown RBP15.38■□□□□ 0.05
HDAC6-219ENST00000476625 CHRNDQ07001 517 aa15.38■□□□□ 0.05
HDAC6-219ENST00000476625 LDLRAD1Q5T700 205 aa15.38■□□□□ 0.05
HDAC6-219ENST00000476625 SPRYD7Q5W111 196 aa15.38■□□□□ 0.05
HDAC6-219ENST00000476625 FBXO46Q6PJ61 603 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-219ENST00000476625 RBBP6Q7Z6E9 1792 aaKnown RBP15.38■□□□□ 0.05
HDAC6-219ENST00000476625 FKTNO75072 461 aa15.37■□□□□ 0.05
HDAC6-219ENST00000476625 NF2P35240 595 aa15.37■□□□□ 0.05
HDAC6-219ENST00000476625 GJA5P36382 358 aa15.37■□□□□ 0.05
HDAC6-219ENST00000476625 GCKRQ14397 625 aa15.37■□□□□ 0.05
HDAC6-219ENST00000476625 TWISTNBQ3B726 338 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-219ENST00000476625 CDAN1Q8IWY9 1227 aa15.37■□□□□ 0.05
HDAC6-219ENST00000476625 CD209Q9NNX6 404 aa15.37■□□□□ 0.05
HDAC6-219ENST00000476625 LEMD3Q9Y2U8 911 aa15.37■□□□□ 0.05
HDAC6-219ENST00000476625 MYO3BQ8WXR4 1341 aa15.37■□□□□ 0.05
HDAC6-219ENST00000476625 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
HDAC6-219ENST00000476625 NEXNQ0ZGT2 675 aa15.36■□□□□ 0.05
HDAC6-219ENST00000476625 ARMC9Q7Z3E5 817 aa15.36■□□□□ 0.05
HDAC6-219ENST00000476625 APOBEC3FQ8IUX4 373 aaKnown RBP15.36■□□□□ 0.05
HDAC6-219ENST00000476625 WNK4Q96J92 1243 aa15.36■□□□□ 0.05
HDAC6-219ENST00000476625 ZNF594Q96JF6 807 aaPredicted RBP15.36■□□□□ 0.05
HDAC6-219ENST00000476625 DEFB129Q9H1M3 183 aa15.36■□□□□ 0.05
HDAC6-219ENST00000476625 KCNJ4P48050 445 aa15.35■□□□□ 0.05
HDAC6-219ENST00000476625 CALD1Q05682 793 aaKnown RBP15.35■□□□□ 0.05
HDAC6-219ENST00000476625 SREBF2Q12772 1141 aa15.35■□□□□ 0.05
HDAC6-219ENST00000476625 PKN2Q16513 984 aaKnown RBP15.35■□□□□ 0.05
HDAC6-219ENST00000476625 NBPF12Q5TAG4 269 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-219ENST00000476625 IFNL1Q8IU54 200 aa15.35■□□□□ 0.05
HDAC6-219ENST00000476625 MPHOSPH8Q99549 860 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms