RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 PAPPA2Q9BXP8 1791 aa13.43□□□□□ -0.26
PGK1-203ENST00000476531 WTIPA6NIX2 430 aaPredicted RBP13.43□□□□□ -0.26
PGK1-203ENST00000476531 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
PGK1-203ENST00000476531 USP17L8P0C7I0 530 aa13.43□□□□□ -0.26
PGK1-203ENST00000476531 ATP2B4P23634 1241 aa13.43□□□□□ -0.26
PGK1-203ENST00000476531 SOX10P56693 466 aa13.43□□□□□ -0.26
PGK1-203ENST00000476531 FKBP1BP68106 108 aa13.43□□□□□ -0.26
PGK1-203ENST00000476531 TSPYL6Q8N831 410 aa13.43□□□□□ -0.26
PGK1-203ENST00000476531 C8orf58Q8NAV2 365 aa13.43□□□□□ -0.26
PGK1-203ENST00000476531 METTL22Q9BUU2 404 aaPredicted RBP13.43□□□□□ -0.26
PGK1-203ENST00000476531 MYOZ2Q9NPC6 264 aa13.43□□□□□ -0.26
PGK1-203ENST00000476531 CWC25Q9NXE8 425 aaPredicted RBP13.43□□□□□ -0.26
PGK1-203ENST00000476531 SUPT16HQ9Y5B9 1047 aaKnown RBP13.43□□□□□ -0.26
PGK1-203ENST00000476531 USP17L3A6NCW0 530 aa13.42□□□□□ -0.26
PGK1-203ENST00000476531 USP17L4A6NCW7 530 aa13.42□□□□□ -0.26
PGK1-203ENST00000476531 MOB2Q70IA6 237 aa13.42□□□□□ -0.26
PGK1-203ENST00000476531 USP17L1Q7RTZ2 530 aa13.42□□□□□ -0.26
PGK1-203ENST00000476531 CTU1Q7Z7A3 348 aaKnown RBP13.42□□□□□ -0.26
PGK1-203ENST00000476531 ANKRD18AQ8IVF6 992 aa13.42□□□□□ -0.26
PGK1-203ENST00000476531 REM2Q8IYK8 340 aaPredicted RBP13.42□□□□□ -0.26
PGK1-203ENST00000476531 RCAN3Q9UKA8 241 aa13.42□□□□□ -0.26
PGK1-203ENST00000476531 SCAF8Q9UPN6 1271 aaKnown RBP13.42□□□□□ -0.26
PGK1-203ENST00000476531 CTSWP56202 376 aa13.41□□□□□ -0.26
PGK1-203ENST00000476531 PODNQ7Z5L7 613 aa13.41□□□□□ -0.26
PGK1-203ENST00000476531 AKAP11Q9UKA4 1901 aa13.41□□□□□ -0.26
PGK1-203ENST00000476531 UBE2Q2LH0YL09 131 aa13.4□□□□□ -0.26
PGK1-203ENST00000476531 PRAMEF18Q5VWM3 479 aa13.4□□□□□ -0.26
PGK1-203ENST00000476531 MXD3Q9BW11 206 aa13.4□□□□□ -0.26
PGK1-203ENST00000476531 MED23Q9ULK4 1368 aa13.4□□□□□ -0.26
PGK1-203ENST00000476531 PDE4DIPQ5VU43 2346 aa13.4□□□□□ -0.26
PGK1-203ENST00000476531 ZNF646O15015 1829 aaPredicted RBP13.39□□□□□ -0.27
PGK1-203ENST00000476531 BCAR3O75815 825 aa13.39□□□□□ -0.27
PGK1-203ENST00000476531 IGKV5-2P06315 115 aa13.39□□□□□ -0.27
PGK1-203ENST00000476531 IRX6P78412 446 aaPredicted RBP13.39□□□□□ -0.27
PGK1-203ENST00000476531 NBPF9Q3BBW0 867 aa13.39□□□□□ -0.27
PGK1-203ENST00000476531 DACT2Q5SW24 774 aa13.39□□□□□ -0.27
PGK1-203ENST00000476531 PRPF38BQ5VTL8 546 aaKnown RBP13.39□□□□□ -0.27
PGK1-203ENST00000476531 TTLL11Q8NHH1 800 aa13.39□□□□□ -0.27
PGK1-203ENST00000476531 CDC5LQ99459 802 aaKnown RBP13.39□□□□□ -0.27
PGK1-203ENST00000476531 BSDC1Q9NW68 430 aaPredicted RBP13.39□□□□□ -0.27
PGK1-203ENST00000476531 MINPP1Q9UNW1 487 aa13.39□□□□□ -0.27
PGK1-203ENST00000476531 MAP3K2Q9Y2U5 619 aa13.39□□□□□ -0.27
PGK1-203ENST00000476531 DDX58O95786 925 aaKnown RBP13.38□□□□□ -0.27
PGK1-203ENST00000476531 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
PGK1-203ENST00000476531 CCDC30Q5VVM6 783 aa13.38□□□□□ -0.27
PGK1-203ENST00000476531 GREM2Q9H772 168 aa13.38□□□□□ -0.27
PGK1-203ENST00000476531 HPS5Q9UPZ3 1129 aa13.38□□□□□ -0.27
PGK1-203ENST00000476531 PI4KAP2A4QPH2 592 aa13.37□□□□□ -0.27
PGK1-203ENST00000476531 PLIN1O60240 522 aa13.37□□□□□ -0.27
PGK1-203ENST00000476531 VAMP4O75379 141 aa13.37□□□□□ -0.27
PGK1-203ENST00000476531 TBC1D8O95759 1140 aa13.37□□□□□ -0.27
PGK1-203ENST00000476531 TM4SF4P48230 202 aa13.37□□□□□ -0.27
PGK1-203ENST00000476531 CCT4P50991 539 aaKnown RBP13.37□□□□□ -0.27
PGK1-203ENST00000476531 RARSP54136 660 aaKnown RBP13.37□□□□□ -0.27
PGK1-203ENST00000476531 TWISTNBQ3B726 338 aaPredicted RBP13.37□□□□□ -0.27
PGK1-203ENST00000476531 KSR2Q6VAB6 950 aa13.37□□□□□ -0.27
PGK1-203ENST00000476531 TXNRD3Q86VQ6 643 aa13.37□□□□□ -0.27
PGK1-203ENST00000476531 PI4KAP1Q8N8J0 262 aa13.37□□□□□ -0.27
PGK1-203ENST00000476531 ZNF296Q8WUU4 475 aaPredicted RBP13.37□□□□□ -0.27
PGK1-203ENST00000476531 WNT10BO00744 389 aa13.36□□□□□ -0.27
PGK1-203ENST00000476531 STRIP1Q5VSL9 837 aa13.36□□□□□ -0.27
PGK1-203ENST00000476531 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
PGK1-203ENST00000476531 COA1Q9GZY4 146 aa13.36□□□□□ -0.27
PGK1-203ENST00000476531 MYO3BQ8WXR4 1341 aa13.36□□□□□ -0.27
PGK1-203ENST00000476531 NEURL1BA8MQ27 555 aa13.35□□□□□ -0.27
PGK1-203ENST00000476531 H7C1W4 665 aa13.35□□□□□ -0.27
PGK1-203ENST00000476531 SASH1O94885 1247 aa13.35□□□□□ -0.27
PGK1-203ENST00000476531 KLRK1P26718 216 aa13.35□□□□□ -0.27
PGK1-203ENST00000476531 RRP1P56182 461 aaKnown RBP13.35□□□□□ -0.27
PGK1-203ENST00000476531 PKN2Q16513 984 aaKnown RBP13.35□□□□□ -0.27
PGK1-203ENST00000476531 CWF19L2Q2TBE0 894 aaKnown RBP13.35□□□□□ -0.27
PGK1-203ENST00000476531 FBXW7Q969H0 707 aa13.35□□□□□ -0.27
PGK1-203ENST00000476531 TNNQ9UQP3 1299 aa13.35□□□□□ -0.27
PGK1-203ENST00000476531 SPEF2Q9C093 1822 aa13.34□□□□□ -0.27
PGK1-203ENST00000476531 GPR25O00155 361 aa13.34□□□□□ -0.27
PGK1-203ENST00000476531 PTPN12Q05209 780 aaKnown RBP13.34□□□□□ -0.27
PGK1-203ENST00000476531 MKRN3Q13064 507 aaKnown RBP13.34□□□□□ -0.27
PGK1-203ENST00000476531 TTLL12Q14166 644 aaPredicted RBP13.34□□□□□ -0.27
PGK1-203ENST00000476531 NOM1Q5C9Z4 860 aaKnown RBP13.34□□□□□ -0.27
PGK1-203ENST00000476531 G2E3Q7L622 706 aa13.34□□□□□ -0.27
PGK1-203ENST00000476531 OGFOD1Q8N543 542 aa13.34□□□□□ -0.27
PGK1-203ENST00000476531 ZBED3Q96IU2 234 aaPredicted RBP13.34□□□□□ -0.27
PGK1-203ENST00000476531 CHMP4AQ9BY43 222 aa13.34□□□□□ -0.27
PGK1-203ENST00000476531 HDAC9Q9UKV0 1011 aa13.34□□□□□ -0.27
PGK1-203ENST00000476531 LEMD3Q9Y2U8 911 aa13.34□□□□□ -0.27
PGK1-203ENST00000476531 NF2P35240 595 aa13.33□□□□□ -0.28
PGK1-203ENST00000476531 MMP14P50281 582 aa13.33□□□□□ -0.28
PGK1-203ENST00000476531 C20orf194Q5TEA3 1177 aa13.33□□□□□ -0.28
PGK1-203ENST00000476531 UBE3BQ7Z3V4 1068 aa13.33□□□□□ -0.28
PGK1-203ENST00000476531 PLA2G12BQ9BX93 195 aa13.33□□□□□ -0.28
PGK1-203ENST00000476531 CFHR5Q9BXR6 569 aa13.33□□□□□ -0.28
PGK1-203ENST00000476531 R3HDMLQ9H3Y0 253 aa13.33□□□□□ -0.28
PGK1-203ENST00000476531 ZNF804BA4D1E1 1349 aa13.33□□□□□ -0.28
PGK1-203ENST00000476531 IGHMBP2P38935 993 aaKnown RBP13.32□□□□□ -0.28
PGK1-203ENST00000476531 CASP7P55210 303 aa13.32□□□□□ -0.28
PGK1-203ENST00000476531 NEXNQ0ZGT2 675 aa13.32□□□□□ -0.28
PGK1-203ENST00000476531 LDLRAD1Q5T700 205 aa13.32□□□□□ -0.28
PGK1-203ENST00000476531 TTLL5Q6EMB2 1281 aa13.32□□□□□ -0.28
PGK1-203ENST00000476531 KIAA0825Q8IV33 1275 aa13.32□□□□□ -0.28
PGK1-203ENST00000476531 MRPL50Q8N5N7 158 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms