RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ANO6Q4KMQ2 910 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 CBX8Q9HC52 389 aa9.85□□□□□ -0.83
VAPB-205ENST00000476395 DDX21Q9NR30 783 aaKnown RBP eCLIP9.85□□□□□ -0.83
VAPB-205ENST00000476395 SLC39A6Q13433 755 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 CCDC129Q6ZRS4 1044 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 LEO1Q8WVC0 666 aaPredicted RBP9.84□□□□□ -0.83
VAPB-205ENST00000476395 NOL10Q9BSC4 688 aaKnown RBP9.84□□□□□ -0.83
VAPB-205ENST00000476395 FAM53CQ9NYF3 392 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 CALCOCO1Q9P1Z2 691 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 RSPH14Q9UHP6 348 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 CYP2C19P33261 490 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 GCKRQ14397 625 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 SIL1Q9H173 461 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 EPC1Q9H2F5 836 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.84□□□□□ -0.83
VAPB-205ENST00000476395 VPS37CA5D8V6 355 aaPredicted RBP9.84□□□□□ -0.83
VAPB-205ENST00000476395 TYRO3Q06418 890 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 SLC20A2Q08357 652 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 RABL6Q3YEC7 729 aaPredicted RBP9.84□□□□□ -0.83
VAPB-205ENST00000476395 ANKRD24Q8TF21 1146 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 SALL1Q9NSC2 1324 aa9.84□□□□□ -0.83
VAPB-205ENST00000476395 FOXP2O15409 715 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 CYP21A2P08686 494 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 IFIT2P09913 472 aaKnown RBP9.83□□□□□ -0.84
VAPB-205ENST00000476395 SYT10Q6XYQ8 523 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 C10orf67Q8IYJ2 551 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 FTOQ9C0B1 505 aaKnown RBP eCLIP9.83□□□□□ -0.84
VAPB-205ENST00000476395 C9orf78Q9NZ63 289 aaPredicted RBP9.83□□□□□ -0.84
VAPB-205ENST00000476395 PIP4K2AP48426 406 aaPredicted RBP9.83□□□□□ -0.84
VAPB-205ENST00000476395 TEFQ10587 303 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 AXDND1Q5T1B0 1012 aaPredicted RBP9.83□□□□□ -0.84
VAPB-205ENST00000476395 LARP1BQ659C4 914 aaKnown RBP9.83□□□□□ -0.84
VAPB-205ENST00000476395 DACT1Q9NYF0 836 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 TFIP11Q9UBB9 837 aaKnown RBP9.83□□□□□ -0.84
VAPB-205ENST00000476395 FHOD1Q9Y613 1164 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 GOLGA6L6A8MZA4 724 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 SNW1Q13573 536 aaKnown RBP9.83□□□□□ -0.84
VAPB-205ENST00000476395 AMOTQ4VCS5 1084 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 ERC1Q8IUD2 1116 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 SMARCC2Q8TAQ2 1214 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 FAM200AQ8TCP9 573 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 DNAJC25Q9H1X3 360 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 GOLPH3LQ9H4A5 285 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 CLIP2Q9UDT6 1046 aa9.83□□□□□ -0.84
VAPB-205ENST00000476395 SEC31AO94979 1220 aaKnown RBP9.82□□□□□ -0.84
VAPB-205ENST00000476395 PLA2G4AP47712 749 aa9.82□□□□□ -0.84
VAPB-205ENST00000476395 ZNF75DP51815 510 aa9.82□□□□□ -0.84
VAPB-205ENST00000476395 SCRN1Q12765 414 aa9.82□□□□□ -0.84
VAPB-205ENST00000476395 IQCB1Q15051 598 aa9.82□□□□□ -0.84
VAPB-205ENST00000476395 PLEKHO1Q53GL0 409 aaPredicted RBP9.82□□□□□ -0.84
VAPB-205ENST00000476395 RUFY2Q8WXA3 655 aa9.82□□□□□ -0.84
VAPB-205ENST00000476395 DDX11Q96FC9 970 aa9.82□□□□□ -0.84
VAPB-205ENST00000476395 COPRSQ9NQ92 184 aa9.82□□□□□ -0.84
VAPB-205ENST00000476395 MYO5AQ9Y4I1 1855 aaKnown RBP9.82□□□□□ -0.84
VAPB-205ENST00000476395 PRR29P0C7W0 189 aa9.82□□□□□ -0.84
VAPB-205ENST00000476395 CCDC192P0DO97 292 aa9.82□□□□□ -0.84
VAPB-205ENST00000476395 ZNF790Q6PG37 636 aa9.82□□□□□ -0.84
VAPB-205ENST00000476395 FBXW7Q969H0 707 aa9.82□□□□□ -0.84
VAPB-205ENST00000476395 CLSTN2Q9H4D0 955 aa9.82□□□□□ -0.84
VAPB-205ENST00000476395 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.82□□□□□ -0.84
VAPB-205ENST00000476395 ATP5JP18859 108 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 TFCP2Q12800 502 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 AIMP1Q12904 312 aaKnown RBP9.81□□□□□ -0.84
VAPB-205ENST00000476395 GORABQ5T7V8 394 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 FILIP1Q7Z7B0 1213 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 KCNH5Q8NCM2 988 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 TDRD7Q8NHU6 1098 aaKnown RBP9.81□□□□□ -0.84
VAPB-205ENST00000476395 AGXT2Q9BYV1 514 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 CLCN6P51797 869 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 SYCP1Q15431 976 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 TNNI3KQ59H18 835 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 ESCO1Q5FWF5 840 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 NKX2-3Q8TAU0 364 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 FPGT-TNNI3KV9GXZ4 949 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 RFX7Q2KHR2 1363 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 LOC102724159A0A0B4J2E5 919 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 STK3Q13188 491 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 PWP2Q15269 919 aaKnown RBP9.81□□□□□ -0.84
VAPB-205ENST00000476395 XAGE3Q8WTP9 111 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 ERCC4Q92889 916 aaPredicted RBP9.81□□□□□ -0.84
VAPB-205ENST00000476395 SMARCE1Q969G3 411 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 ZNF496Q96IT1 587 aaPredicted RBP9.81□□□□□ -0.84
VAPB-205ENST00000476395 METTL22Q9BUU2 404 aaPredicted RBP9.81□□□□□ -0.84
VAPB-205ENST00000476395 ATP6V1DQ9Y5K8 247 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 KCPQ6ZWJ8 1503 aa9.81□□□□□ -0.84
VAPB-205ENST00000476395 SPEF2Q9C093 1822 aa9.8□□□□□ -0.84
VAPB-205ENST00000476395 KRBA2Q6ZNG9 492 aa9.8□□□□□ -0.84
VAPB-205ENST00000476395 C11orf57Q6ZUT1 292 aaPredicted RBP9.8□□□□□ -0.84
VAPB-205ENST00000476395 ATG9AQ7Z3C6 839 aa9.8□□□□□ -0.84
VAPB-205ENST00000476395 SLC52A2Q9HAB3 445 aa9.8□□□□□ -0.84
VAPB-205ENST00000476395 TOMM22Q9NS69 142 aa9.8□□□□□ -0.84
VAPB-205ENST00000476395 PAXBP1Q9Y5B6 917 aa9.8□□□□□ -0.84
VAPB-205ENST00000476395 TOGARAM1Q9Y4F4 1720 aa9.8□□□□□ -0.84
VAPB-205ENST00000476395 AKAP11Q9UKA4 1901 aa9.8□□□□□ -0.84
VAPB-205ENST00000476395 TNNT3P45378 269 aaPredicted RBP9.8□□□□□ -0.84
VAPB-205ENST00000476395 FOXO4P98177 505 aa9.8□□□□□ -0.84
VAPB-205ENST00000476395 EXOSC10Q01780 885 aaKnown RBP9.8□□□□□ -0.84
VAPB-205ENST00000476395 BLOC1S2Q6QNY1 142 aa9.8□□□□□ -0.84
VAPB-205ENST00000476395 ENGASEQ8NFI3 743 aa9.8□□□□□ -0.84
VAPB-205ENST00000476395 DBNDD2Q9BQY9 259 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms