RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 RHPN1Q8TCX5 695 aa27.38■■□□□ 1.97
MCF2L2-209ENST00000475664 LPIN2Q92539 896 aa27.38■■□□□ 1.97
MCF2L2-209ENST00000475664 KIF1BPQ96EK5 621 aa27.38■■□□□ 1.97
MCF2L2-209ENST00000475664 ZC3H12CQ9C0D7 883 aaKnown RBP27.38■■□□□ 1.97
MCF2L2-209ENST00000475664 GPR108Q9NPR9 543 aa27.38■■□□□ 1.97
MCF2L2-209ENST00000475664 UTRNP46939 3433 aa27.37■■□□□ 1.97
MCF2L2-209ENST00000475664 RIMBP2O15034 1052 aa27.37■■□□□ 1.97
MCF2L2-209ENST00000475664 AKAP2Q9Y2D5 859 aa27.37■■□□□ 1.97
MCF2L2-209ENST00000475664 APBB1O00213 710 aa27.36■■□□□ 1.97
MCF2L2-209ENST00000475664 SLC5A1P13866 664 aa27.36■■□□□ 1.97
MCF2L2-209ENST00000475664 LARGE2Q8N3Y3 721 aa27.36■■□□□ 1.97
MCF2L2-209ENST00000475664 IFIT1P09914 478 aaKnown RBP27.35■■□□□ 1.97
MCF2L2-209ENST00000475664 TNNI3KQ59H18 835 aa27.35■■□□□ 1.97
MCF2L2-209ENST00000475664 ERICH6BQ5W0A0 696 aa27.35■■□□□ 1.97
MCF2L2-209ENST00000475664 GCC1Q96CN9 775 aa27.35■■□□□ 1.97
MCF2L2-209ENST00000475664 RNF181Q9P0P0 153 aa27.35■■□□□ 1.97
MCF2L2-209ENST00000475664 FPGT-TNNI3KV9GXZ4 949 aa27.35■■□□□ 1.97
MCF2L2-209ENST00000475664 A0A1B0GUL7 405 aa27.34■■□□□ 1.97
MCF2L2-209ENST00000475664 C9orf131Q5VYM1 1079 aa27.34■■□□□ 1.97
MCF2L2-209ENST00000475664 SMC5Q8IY18 1101 aa27.34■■□□□ 1.97
MCF2L2-209ENST00000475664 LRRCC1Q9C099 1032 aa27.34■■□□□ 1.97
MCF2L2-209ENST00000475664 TIMM10P62072 90 aa27.33■■□□□ 1.97
MCF2L2-209ENST00000475664 IL1RAPL2Q9NP60 686 aa27.33■■□□□ 1.97
MCF2L2-209ENST00000475664 SCN9AQ15858 1988 aa27.31■■□□□ 1.96
MCF2L2-209ENST00000475664 ADORA1P30542 326 aa27.31■■□□□ 1.96
MCF2L2-209ENST00000475664 GYG1P46976 350 aa27.31■■□□□ 1.96
MCF2L2-209ENST00000475664 DOK7Q18PE1 504 aa27.31■■□□□ 1.96
MCF2L2-209ENST00000475664 NIM1KQ8IY84 436 aa27.31■■□□□ 1.96
MCF2L2-209ENST00000475664 EAF2Q96CJ1 260 aaPredicted RBP27.31■■□□□ 1.96
MCF2L2-209ENST00000475664 FAM84BQ96KN1 310 aaPredicted RBP27.31■■□□□ 1.96
MCF2L2-209ENST00000475664 PSME4Q14997 1843 aa27.3■■□□□ 1.96
MCF2L2-209ENST00000475664 ZNF804AQ7Z570 1209 aa27.3■■□□□ 1.96
MCF2L2-209ENST00000475664 FBXO33Q7Z6M2 555 aa27.3■■□□□ 1.96
MCF2L2-209ENST00000475664 CLASRPQ8N2M8 674 aaKnown RBP27.3■■□□□ 1.96
MCF2L2-209ENST00000475664 JDP2Q8WYK2 163 aa27.3■■□□□ 1.96
MCF2L2-209ENST00000475664 XAGE2Q96GT9 111 aa27.3■■□□□ 1.96
MCF2L2-209ENST00000475664 COA1Q9GZY4 146 aa27.3■■□□□ 1.96
MCF2L2-209ENST00000475664 DBNDD1Q9H9R9 158 aa27.3■■□□□ 1.96
MCF2L2-209ENST00000475664 SMARCA5O60264 1052 aaPredicted RBP27.29■■□□□ 1.96
MCF2L2-209ENST00000475664 ECE2O60344 883 aa27.29■■□□□ 1.96
MCF2L2-209ENST00000475664 NEUROD6Q96NK8 337 aa27.29■■□□□ 1.96
MCF2L2-209ENST00000475664 ZNF646O15015 1829 aaPredicted RBP27.28■■□□□ 1.96
MCF2L2-209ENST00000475664 HIBADHP31937 336 aaKnown RBP27.28■■□□□ 1.96
MCF2L2-209ENST00000475664 CAVIN4Q5BKX8 364 aa27.28■■□□□ 1.96
MCF2L2-209ENST00000475664 AACSQ86V21 672 aa27.28■■□□□ 1.96
MCF2L2-209ENST00000475664 CD209Q9NNX6 404 aa27.28■■□□□ 1.96
MCF2L2-209ENST00000475664 ZNRF3Q9ULT6 936 aa27.28■■□□□ 1.96
MCF2L2-209ENST00000475664 MYH13Q9UKX3 1938 aa27.28■■□□□ 1.96
MCF2L2-209ENST00000475664 ZC3H4Q9UPT8 1303 aaKnown RBP27.27■■□□□ 1.96
MCF2L2-209ENST00000475664 YDJCA8MPS7 323 aa27.27■■□□□ 1.96
MCF2L2-209ENST00000475664 G3V3G9 751 aa27.27■■□□□ 1.96
MCF2L2-209ENST00000475664 FZD9O00144 591 aa27.27■■□□□ 1.96
MCF2L2-209ENST00000475664 BCAMP50895 628 aa27.27■■□□□ 1.96
MCF2L2-209ENST00000475664 DCAF8Q5TAQ9 597 aa27.27■■□□□ 1.96
MCF2L2-209ENST00000475664 DBNDD2Q9BQY9 259 aa27.27■■□□□ 1.96
MCF2L2-209ENST00000475664 TLR7Q9NYK1 1049 aaKnown RBP27.27■■□□□ 1.96
MCF2L2-209ENST00000475664 DBNLQ9UJU6 430 aaKnown RBP27.27■■□□□ 1.96
MCF2L2-209ENST00000475664 IL1R1P14778 569 aa27.26■■□□□ 1.95
MCF2L2-209ENST00000475664 PODNQ7Z5L7 613 aa27.26■■□□□ 1.95
MCF2L2-209ENST00000475664 CCDC8Q9H0W5 538 aaPredicted RBP27.26■■□□□ 1.95
MCF2L2-209ENST00000475664 KDM2BQ8NHM5 1336 aa27.25■■□□□ 1.95
MCF2L2-209ENST00000475664 PHKA1P46020 1223 aa27.25■■□□□ 1.95
MCF2L2-209ENST00000475664 ANKRD45Q5TZF3 282 aa27.25■■□□□ 1.95
MCF2L2-209ENST00000475664 CCDC102BQ68D86 513 aa27.24■■□□□ 1.95
MCF2L2-209ENST00000475664 VPS37DQ86XT2 251 aa27.24■■□□□ 1.95
MCF2L2-209ENST00000475664 TDRD7Q8NHU6 1098 aaKnown RBP27.24■■□□□ 1.95
MCF2L2-209ENST00000475664 CCDC136Q96JN2 1154 aa27.23■■□□□ 1.95
MCF2L2-209ENST00000475664 PPP4R2Q9NY27 417 aa27.23■■□□□ 1.95
MCF2L2-209ENST00000475664 ZNF541Q9H0D2 1346 aa27.22■■□□□ 1.95
MCF2L2-209ENST00000475664 ZBTB22O15209 634 aa27.22■■□□□ 1.95
MCF2L2-209ENST00000475664 IFIT2P09913 472 aaKnown RBP27.22■■□□□ 1.95
MCF2L2-209ENST00000475664 GORABQ5T7V8 394 aa27.22■■□□□ 1.95
MCF2L2-209ENST00000475664 B4GALNT3Q6L9W6 998 aa27.22■■□□□ 1.95
MCF2L2-209ENST00000475664 BCL11AQ9H165 835 aa27.22■■□□□ 1.95
MCF2L2-209ENST00000475664 KCNQ5Q9NR82 932 aa27.22■■□□□ 1.95
MCF2L2-209ENST00000475664 NUCB1Q02818 461 aa27.21■■□□□ 1.95
MCF2L2-209ENST00000475664 CXCL9Q07325 125 aa27.21■■□□□ 1.95
MCF2L2-209ENST00000475664 COL1A1P02452 1464 aaPredicted RBP27.2■■□□□ 1.95
MCF2L2-209ENST00000475664 EIF6P56537 245 aaKnown RBP27.2■■□□□ 1.94
MCF2L2-209ENST00000475664 GNL3LQ9NVN8 582 aaKnown RBP27.2■■□□□ 1.94
MCF2L2-209ENST00000475664 IQSEC3Q9UPP2 1182 aaPredicted RBP27.2■■□□□ 1.94
MCF2L2-209ENST00000475664 AKAP11Q9UKA4 1901 aa27.2■■□□□ 1.94
MCF2L2-209ENST00000475664 RAD17O75943 681 aa27.19■■□□□ 1.94
MCF2L2-209ENST00000475664 ARID4AP29374 1257 aaPredicted RBP27.19■■□□□ 1.94
MCF2L2-209ENST00000475664 CENPQQ7L2Z9 268 aaPredicted RBP27.19■■□□□ 1.94
MCF2L2-209ENST00000475664 CHD1LQ86WJ1 897 aa27.19■■□□□ 1.94
MCF2L2-209ENST00000475664 ZBTB47Q9UFB7 747 aaPredicted RBP27.19■■□□□ 1.94
MCF2L2-209ENST00000475664 CCDC158Q5M9N0 1113 aa27.18■■□□□ 1.94
MCF2L2-209ENST00000475664 CIAPIN1Q6FI81 312 aa27.18■■□□□ 1.94
MCF2L2-209ENST00000475664 ZNF512BQ96KM6 892 aaPredicted RBP27.18■■□□□ 1.94
MCF2L2-209ENST00000475664 LNPKQ9C0E8 428 aa27.18■■□□□ 1.94
MCF2L2-209ENST00000475664 FAM205AQ6ZU69 1335 aa27.17■■□□□ 1.94
MCF2L2-209ENST00000475664 USP17L3A6NCW0 530 aa27.17■■□□□ 1.94
MCF2L2-209ENST00000475664 USP17L4A6NCW7 530 aa27.17■■□□□ 1.94
MCF2L2-209ENST00000475664 SEMA3EO15041 775 aa27.17■■□□□ 1.94
MCF2L2-209ENST00000475664 UQCRFS1P1P0C7P4 283 aa27.17■■□□□ 1.94
MCF2L2-209ENST00000475664 TTC39AQ5SRH9 613 aa27.17■■□□□ 1.94
MCF2L2-209ENST00000475664 USP17L1Q7RTZ2 530 aa27.17■■□□□ 1.94
MCF2L2-209ENST00000475664 C16orf71Q8IYS4 520 aaPredicted RBP27.17■■□□□ 1.94
MCF2L2-209ENST00000475664 PSMD14O00487 310 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms