RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 PODNQ7Z5L7 613 aa8.99□□□□□ -0.97
HDAC3-207ENST00000475549 AGBL3Q8NEM8 1001 aa8.99□□□□□ -0.97
HDAC3-207ENST00000475549 LINS1Q8NG48 757 aa8.99□□□□□ -0.97
HDAC3-207ENST00000475549 CDC5LQ99459 802 aaKnown RBP8.99□□□□□ -0.97
HDAC3-207ENST00000475549 SCAF8Q9UPN6 1271 aaKnown RBP8.99□□□□□ -0.97
HDAC3-207ENST00000475549 USP17L3A6NCW0 530 aa8.98□□□□□ -0.97
HDAC3-207ENST00000475549 USP17L4A6NCW7 530 aa8.98□□□□□ -0.97
HDAC3-207ENST00000475549 G3V3G9 751 aa8.98□□□□□ -0.97
HDAC3-207ENST00000475549 USP17L8P0C7I0 530 aa8.98□□□□□ -0.97
HDAC3-207ENST00000475549 DACT2Q5SW24 774 aa8.98□□□□□ -0.97
HDAC3-207ENST00000475549 DCAF8Q5TAQ9 597 aa8.98□□□□□ -0.97
HDAC3-207ENST00000475549 ANGEL2Q5VTE6 544 aaKnown RBP8.98□□□□□ -0.97
HDAC3-207ENST00000475549 USP17L1Q7RTZ2 530 aa8.98□□□□□ -0.97
HDAC3-207ENST00000475549 FAM9BQ8IZU0 186 aa8.98□□□□□ -0.97
HDAC3-207ENST00000475549 DCPSQ96C86 337 aaKnown RBP8.98□□□□□ -0.97
HDAC3-207ENST00000475549 GGA3Q9NZ52 723 aa8.98□□□□□ -0.97
HDAC3-207ENST00000475549 ZNF521Q96K83 1311 aa8.98□□□□□ -0.97
HDAC3-207ENST00000475549 IRS2Q9Y4H2 1338 aa8.98□□□□□ -0.97
HDAC3-207ENST00000475549 HUNKP57058 714 aa8.97□□□□□ -0.97
HDAC3-207ENST00000475549 CHRNDQ07001 517 aa8.97□□□□□ -0.97
HDAC3-207ENST00000475549 NBPF9Q3BBW0 867 aa8.97□□□□□ -0.97
HDAC3-207ENST00000475549 PRAMEF18Q5VWM3 479 aa8.97□□□□□ -0.97
HDAC3-207ENST00000475549 GBA2Q9HCG7 927 aaPredicted RBP8.97□□□□□ -0.97
HDAC3-207ENST00000475549 MYOZ2Q9NPC6 264 aa8.97□□□□□ -0.97
HDAC3-207ENST00000475549 ZNF804BA4D1E1 1349 aa8.97□□□□□ -0.97
HDAC3-207ENST00000475549 MED23Q9ULK4 1368 aa8.97□□□□□ -0.97
HDAC3-207ENST00000475549 ZNF609O15014 1411 aa8.97□□□□□ -0.97
HDAC3-207ENST00000475549 TAF5LO75529 589 aa8.96□□□□□ -0.98
HDAC3-207ENST00000475549 IGHMBP2P38935 993 aaKnown RBP8.96□□□□□ -0.98
HDAC3-207ENST00000475549 BRPF1P55201 1214 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-207ENST00000475549 SULF1Q8IWU6 871 aa8.96□□□□□ -0.98
HDAC3-207ENST00000475549 HELBQ8NG08 1087 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-207ENST00000475549 CDCA5Q96FF9 252 aa8.96□□□□□ -0.98
HDAC3-207ENST00000475549 KAZALD1Q96I82 304 aa8.96□□□□□ -0.98
HDAC3-207ENST00000475549 COA1Q9GZY4 146 aa8.96□□□□□ -0.98
HDAC3-207ENST00000475549 LEMD3Q9Y2U8 911 aa8.96□□□□□ -0.98
HDAC3-207ENST00000475549 WNT10BO00744 389 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 NOGQ13253 232 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 STRIP1Q5VSL9 837 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 TTLL5Q6EMB2 1281 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 RGMBQ6NW40 437 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 LMBR1LQ6UX01 489 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 MOB2Q70IA6 237 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 CERS5Q8N5B7 392 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 C2orf69Q8N8R5 385 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 ZBED3Q96IU2 234 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-207ENST00000475549 ZNF594Q96JF6 807 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-207ENST00000475549 MPHOSPH8Q99549 860 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 ANKRD2Q9GZV1 360 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 MYH16Q9H6N6 1097 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 FOXD4L1Q9NU39 408 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 SCN9AQ15858 1988 aa8.95□□□□□ -0.98
HDAC3-207ENST00000475549 ANKRD18BA2A2Z9 1011 aa8.94□□□□□ -0.98
HDAC3-207ENST00000475549 GRM8O00222 908 aa8.94□□□□□ -0.98
HDAC3-207ENST00000475549 NBPF7P0C2Y1 421 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-207ENST00000475549 GTF2IP78347 998 aa8.94□□□□□ -0.98
HDAC3-207ENST00000475549 KIF23Q02241 960 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-207ENST00000475549 C15orf52Q6ZUT6 534 aaKnown RBP8.94□□□□□ -0.98
HDAC3-207ENST00000475549 ABHD8Q96I13 439 aa8.94□□□□□ -0.98
HDAC3-207ENST00000475549 BEGAINQ9BUH8 593 aa8.94□□□□□ -0.98
HDAC3-207ENST00000475549 CD209Q9NNX6 404 aa8.94□□□□□ -0.98
HDAC3-207ENST00000475549 PCDHAC2Q9Y5I4 1007 aa8.94□□□□□ -0.98
HDAC3-207ENST00000475549 THSD7BQ9C0I4 1608 aa8.94□□□□□ -0.98
HDAC3-207ENST00000475549 ZNF157P51786 506 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-207ENST00000475549 IFIT5Q13325 482 aaKnown RBP8.93□□□□□ -0.98
HDAC3-207ENST00000475549 KIAA0825Q8IV33 1275 aa8.93□□□□□ -0.98
HDAC3-207ENST00000475549 CCDC102AQ96A19 550 aa8.93□□□□□ -0.98
HDAC3-207ENST00000475549 CSRNP1Q96S65 589 aa8.93□□□□□ -0.98
HDAC3-207ENST00000475549 RNF186Q9NXI6 227 aa8.93□□□□□ -0.98
HDAC3-207ENST00000475549 AOX1Q06278 1338 aa8.93□□□□□ -0.98
HDAC3-207ENST00000475549 PITPNM2Q9BZ72 1349 aa8.92□□□□□ -0.98
HDAC3-207ENST00000475549 UBE2Q2LH0YL09 131 aa8.92□□□□□ -0.98
HDAC3-207ENST00000475549 CA12O43570 354 aa8.92□□□□□ -0.98
HDAC3-207ENST00000475549 ALDH1L1O75891 902 aa8.92□□□□□ -0.98
HDAC3-207ENST00000475549 SASH1O94885 1247 aa8.92□□□□□ -0.98
HDAC3-207ENST00000475549 SLC10A3P09131 477 aa8.92□□□□□ -0.98
HDAC3-207ENST00000475549 IL1R1P14778 569 aa8.92□□□□□ -0.98
HDAC3-207ENST00000475549 SLC4A10Q6U841 1118 aa8.92□□□□□ -0.98
HDAC3-207ENST00000475549 OGFOD1Q8N543 542 aa8.92□□□□□ -0.98
HDAC3-207ENST00000475549 MRPL50Q8N5N7 158 aaKnown RBP8.92□□□□□ -0.98
HDAC3-207ENST00000475549 FBXW7Q969H0 707 aa8.92□□□□□ -0.98
HDAC3-207ENST00000475549 SUCLG2Q96I99 432 aa8.92□□□□□ -0.98
HDAC3-207ENST00000475549 PUS3Q9BZE2 481 aaKnown RBP8.92□□□□□ -0.98
HDAC3-207ENST00000475549 CHMP3Q9Y3E7 222 aa8.92□□□□□ -0.98
HDAC3-207ENST00000475549 UTYO14607 1347 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 PLIN1O60240 522 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 KCNJ4P48050 445 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 FKBP1BP68106 108 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 LDHAL6AQ6ZMR3 332 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 RASAL3Q86YV0 1011 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 ANKRD44Q8N8A2 993 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 SSH1Q8WYL5 1049 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 CDCA7LQ96GN5 454 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 SRCIN1Q9C0H9 1055 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 MCOLN1Q9GZU1 580 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 C9orf78Q9NZ63 289 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-207ENST00000475549 FZD1Q9UP38 647 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 JAG2Q9Y219 1238 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 RIPOR2Q9Y4F9 1068 aa8.91□□□□□ -0.98
HDAC3-207ENST00000475549 MYO3BQ8WXR4 1341 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms