RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 LEMD3Q9Y2U8 911 aa19.15■□□□□ 0.66
VARS-223ENST00000474643 USP17L8P0C7I0 530 aa19.14■□□□□ 0.65
VARS-223ENST00000474643 LBX1P52954 281 aa19.14■□□□□ 0.65
VARS-223ENST00000474643 HUNKP57058 714 aa19.14■□□□□ 0.65
VARS-223ENST00000474643 IFIT5Q13325 482 aaKnown RBP19.14■□□□□ 0.65
VARS-223ENST00000474643 OGFOD1Q8N543 542 aa19.14■□□□□ 0.65
VARS-223ENST00000474643 C2orf69Q8N8R5 385 aa19.14■□□□□ 0.65
VARS-223ENST00000474643 PLA2G12BQ9BX93 195 aa19.14■□□□□ 0.65
VARS-223ENST00000474643 PRDM10Q9NQV6 1147 aa19.14■□□□□ 0.65
VARS-223ENST00000474643 C9orf78Q9NZ63 289 aaPredicted RBP19.14■□□□□ 0.65
VARS-223ENST00000474643 ADM5C9JUS6 153 aa19.13■□□□□ 0.65
VARS-223ENST00000474643 EGFRP00533 1210 aa19.13■□□□□ 0.65
VARS-223ENST00000474643 ZNF804BA4D1E1 1349 aa19.12■□□□□ 0.65
VARS-223ENST00000474643 CCDC57Q2TAC2 916 aa19.12■□□□□ 0.65
VARS-223ENST00000474643 COA1Q9GZY4 146 aa19.12■□□□□ 0.65
VARS-223ENST00000474643 MYOZ2Q9NPC6 264 aa19.12■□□□□ 0.65
VARS-223ENST00000474643 MYO3BQ8WXR4 1341 aa19.11■□□□□ 0.65
VARS-223ENST00000474643 AOC2O75106 756 aa19.11■□□□□ 0.65
VARS-223ENST00000474643 MAP2K2P36507 400 aa19.11■□□□□ 0.65
VARS-223ENST00000474643 HHIPL1Q96JK4 782 aa19.11■□□□□ 0.65
VARS-223ENST00000474643 GBA2Q9HCG7 927 aaPredicted RBP19.11■□□□□ 0.65
VARS-223ENST00000474643 GRM8O00222 908 aa19.1■□□□□ 0.65
VARS-223ENST00000474643 SCARF1Q14162 830 aa19.1■□□□□ 0.65
VARS-223ENST00000474643 ANGEL2Q5VTE6 544 aaKnown RBP19.1■□□□□ 0.65
VARS-223ENST00000474643 SCN9AQ15858 1988 aa19.1■□□□□ 0.65
VARS-223ENST00000474643 CSF1RP07333 972 aa19.09■□□□□ 0.65
VARS-223ENST00000474643 ZNF280AP59817 542 aaPredicted RBP19.09■□□□□ 0.65
VARS-223ENST00000474643 CHRNDQ07001 517 aa19.09■□□□□ 0.65
VARS-223ENST00000474643 BEND3Q5T5X7 828 aa19.09■□□□□ 0.65
VARS-223ENST00000474643 SRCIN1Q9C0H9 1055 aa19.09■□□□□ 0.65
VARS-223ENST00000474643 CNNM1Q9NRU3 951 aa19.09■□□□□ 0.65
VARS-223ENST00000474643 HDAC9Q9UKV0 1011 aa19.09■□□□□ 0.65
VARS-223ENST00000474643 WTIPA6NIX2 430 aaPredicted RBP19.08■□□□□ 0.64
VARS-223ENST00000474643 HSPA8P11142 646 aaKnown RBP19.08■□□□□ 0.64
VARS-223ENST00000474643 CASP7P55210 303 aa19.08■□□□□ 0.64
VARS-223ENST00000474643 NOGQ13253 232 aa19.08■□□□□ 0.64
VARS-223ENST00000474643 STRIP1Q5VSL9 837 aa19.08■□□□□ 0.64
VARS-223ENST00000474643 LMBR1LQ6UX01 489 aa19.08■□□□□ 0.64
VARS-223ENST00000474643 CA12O43570 354 aa19.07■□□□□ 0.64
VARS-223ENST00000474643 ZNF157P51786 506 aaPredicted RBP19.07■□□□□ 0.64
VARS-223ENST00000474643 DLK2Q6UY11 383 aa19.07■□□□□ 0.64
VARS-223ENST00000474643 CDCA5Q96FF9 252 aa19.07■□□□□ 0.64
VARS-223ENST00000474643 ZNF609O15014 1411 aa19.07■□□□□ 0.64
VARS-223ENST00000474643 THSD7BQ9C0I4 1608 aa19.07■□□□□ 0.64
VARS-223ENST00000474643 PLIN1O60240 522 aa19.06■□□□□ 0.64
VARS-223ENST00000474643 ALDH1L1O75891 902 aa19.06■□□□□ 0.64
VARS-223ENST00000474643 BRPF1P55201 1214 aaPredicted RBP19.06■□□□□ 0.64
VARS-223ENST00000474643 TTLL5Q6EMB2 1281 aa19.06■□□□□ 0.64
VARS-223ENST00000474643 RGMBQ6NW40 437 aa19.06■□□□□ 0.64
VARS-223ENST00000474643 LDHAL6AQ6ZMR3 332 aa19.06■□□□□ 0.64
VARS-223ENST00000474643 ZNF804AQ7Z570 1209 aa19.06■□□□□ 0.64
VARS-223ENST00000474643 HELBQ8NG08 1087 aaPredicted RBP19.06■□□□□ 0.64
VARS-223ENST00000474643 ASTN2O75129 1339 aaPredicted RBP19.05■□□□□ 0.64
VARS-223ENST00000474643 TAF5LO75529 589 aa19.05■□□□□ 0.64
VARS-223ENST00000474643 GTF2IP78347 998 aa19.05■□□□□ 0.64
VARS-223ENST00000474643 FOXO4P98177 505 aa19.05■□□□□ 0.64
VARS-223ENST00000474643 TTLL12Q14166 644 aaPredicted RBP19.05■□□□□ 0.64
VARS-223ENST00000474643 DACT2Q5SW24 774 aa19.05■□□□□ 0.64
VARS-223ENST00000474643 TRMT2AQ8IZ69 625 aaKnown RBP19.05■□□□□ 0.64
VARS-223ENST00000474643 CCDC102AQ96A19 550 aa19.05■□□□□ 0.64
VARS-223ENST00000474643 MXD3Q9BW11 206 aa19.05■□□□□ 0.64
VARS-223ENST00000474643 TSKSQ9UJT2 592 aa19.05■□□□□ 0.64
VARS-223ENST00000474643 PSME4Q14997 1843 aa19.04■□□□□ 0.64
VARS-223ENST00000474643 PITPNM2Q9BZ72 1349 aa19.04■□□□□ 0.64
VARS-223ENST00000474643 KLRK1P26718 216 aa19.04■□□□□ 0.64
VARS-223ENST00000474643 NF2P35240 595 aa19.04■□□□□ 0.64
VARS-223ENST00000474643 KIAA0825Q8IV33 1275 aa19.04■□□□□ 0.64
VARS-223ENST00000474643 GMLQ99445 158 aa19.04■□□□□ 0.64
VARS-223ENST00000474643 TXNRD3Q86VQ6 643 aa19.03■□□□□ 0.64
VARS-223ENST00000474643 SMC4Q9NTJ3 1288 aa19.03■□□□□ 0.64
VARS-223ENST00000474643 SASH1O94885 1247 aa19.02■□□□□ 0.64
VARS-223ENST00000474643 CT47B1P0C2W7 299 aaPredicted RBP19.02■□□□□ 0.64
VARS-223ENST00000474643 MMP14P50281 582 aa19.02■□□□□ 0.64
VARS-223ENST00000474643 SSH1Q8WYL5 1049 aa19.02■□□□□ 0.64
VARS-223ENST00000474643 ZNF594Q96JF6 807 aaPredicted RBP19.02■□□□□ 0.64
VARS-223ENST00000474643 ZBED9Q6R2W3 1325 aa19.01■□□□□ 0.63
VARS-223ENST00000474643 NBPF9Q3BBW0 867 aa19.01■□□□□ 0.63
VARS-223ENST00000474643 ALDH1L2Q3SY69 923 aa19.01■□□□□ 0.63
VARS-223ENST00000474643 MRPL50Q8N5N7 158 aaKnown RBP19.01■□□□□ 0.63
VARS-223ENST00000474643 CD209Q9NNX6 404 aa19.01■□□□□ 0.63
VARS-223ENST00000474643 PTPRCP08575 1304 aa19■□□□□ 0.63
VARS-223ENST00000474643 FKBP1BP68106 108 aa19■□□□□ 0.63
VARS-223ENST00000474643 EPHA10Q5JZY3 1008 aa19■□□□□ 0.63
VARS-223ENST00000474643 APOBEC3FQ8IUX4 373 aaKnown RBP19■□□□□ 0.63
VARS-223ENST00000474643 SCAF8Q9UPN6 1271 aaKnown RBP19■□□□□ 0.63
VARS-223ENST00000474643 POLR2AP24928 1970 aaKnown RBP19■□□□□ 0.63
VARS-223ENST00000474643 F8W031 263 aaPredicted RBP18.99■□□□□ 0.63
VARS-223ENST00000474643 SNAP23O00161 211 aa18.99■□□□□ 0.63
VARS-223ENST00000474643 WNT10BO00744 389 aa18.99■□□□□ 0.63
VARS-223ENST00000474643 MYO1BO43795 1136 aa18.99■□□□□ 0.63
VARS-223ENST00000474643 DLGAP5Q15398 846 aa18.99■□□□□ 0.63
VARS-223ENST00000474643 VPS37DQ86XT2 251 aa18.99■□□□□ 0.63
VARS-223ENST00000474643 SUCLG2Q96I99 432 aa18.99■□□□□ 0.63
VARS-223ENST00000474643 RBM5P52756 815 aaKnown RBP eCLIP18.98■□□□□ 0.63
VARS-223ENST00000474643 FRAT2O75474 233 aaPredicted RBP18.97■□□□□ 0.63
VARS-223ENST00000474643 KIF23Q02241 960 aaPredicted RBP18.97■□□□□ 0.63
VARS-223ENST00000474643 BICC1Q9H694 974 aaKnown RBP18.97■□□□□ 0.63
VARS-223ENST00000474643 JAG2Q9Y219 1238 aa18.97■□□□□ 0.63
VARS-223ENST00000474643 PAPPA2Q9BXP8 1791 aa18.96■□□□□ 0.63
VARS-223ENST00000474643 SLC10A3P09131 477 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms