RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
COL12A1-206ENST00000474564 DBNLQ9UJU6 430 aaKnown RBP12.59□□□□□ -0.39
COL12A1-206ENST00000474564 TNRC6CQ9HCJ0 1690 aaKnown RBP12.58□□□□□ -0.4
COL12A1-206ENST00000474564 ZNF609O15014 1411 aa12.58□□□□□ -0.4
COL12A1-206ENST00000474564 SEMA3EO15041 775 aa12.58□□□□□ -0.4
COL12A1-206ENST00000474564 C21orf2O43822 256 aa12.58□□□□□ -0.4
COL12A1-206ENST00000474564 FGFR2P21802 821 aa12.58□□□□□ -0.4
COL12A1-206ENST00000474564 TTF1Q15361 905 aaPredicted RBP12.58□□□□□ -0.4
COL12A1-206ENST00000474564 WASHC4Q2M389 1173 aa12.58□□□□□ -0.4
COL12A1-206ENST00000474564 RILPL2Q969X0 211 aa12.58□□□□□ -0.4
COL12A1-206ENST00000474564 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
COL12A1-206ENST00000474564 ZNF512BQ96KM6 892 aaPredicted RBP12.58□□□□□ -0.4
COL12A1-206ENST00000474564 VPS33BQ9H267 617 aa12.58□□□□□ -0.4
COL12A1-206ENST00000474564 HIP1O00291 1037 aa12.57□□□□□ -0.4
COL12A1-206ENST00000474564 FKBP4Q02790 459 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL12A1-206ENST00000474564 CCDC102BQ68D86 513 aa12.57□□□□□ -0.4
COL12A1-206ENST00000474564 ZSCAN25Q6NSZ9 544 aa12.57□□□□□ -0.4
COL12A1-206ENST00000474564 C15orf52Q6ZUT6 534 aaKnown RBP12.57□□□□□ -0.4
COL12A1-206ENST00000474564 TICAM2Q86XR7 235 aa12.57□□□□□ -0.4
COL12A1-206ENST00000474564 TBC1D16Q8TBP0 767 aa12.57□□□□□ -0.4
COL12A1-206ENST00000474564 BOLA2Q9H3K6 86 aa12.57□□□□□ -0.4
COL12A1-206ENST00000474564 DENND2AQ9ULE3 1009 aa12.57□□□□□ -0.4
COL12A1-206ENST00000474564 BCS1LQ9Y276 419 aa12.57□□□□□ -0.4
COL12A1-206ENST00000474564 ZGPATQ8N5A5 531 aaKnown RBP12.56□□□□□ -0.4
COL12A1-206ENST00000474564 OTUD7AQ8TE49 926 aaPredicted RBP12.56□□□□□ -0.4
COL12A1-206ENST00000474564 RUFY2Q8WXA3 655 aa12.56□□□□□ -0.4
COL12A1-206ENST00000474564 DNAJC2Q99543 621 aaKnown RBP12.56□□□□□ -0.4
COL12A1-206ENST00000474564 HAUS7Q99871 368 aa12.56□□□□□ -0.4
COL12A1-206ENST00000474564 FHDC1Q9C0D6 1143 aaPredicted RBP12.56□□□□□ -0.4
COL12A1-206ENST00000474564 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL12A1-206ENST00000474564 LRP5O75197 1615 aa12.55□□□□□ -0.4
COL12A1-206ENST00000474564 ANKRD31Q8N7Z5 1873 aa12.55□□□□□ -0.4
COL12A1-206ENST00000474564 AK9Q5TCS8 1911 aa12.55□□□□□ -0.4
COL12A1-206ENST00000474564 DCAF8L1A6NGE4 600 aa12.55□□□□□ -0.4
COL12A1-206ENST00000474564 KCNA3P22001 575 aa12.55□□□□□ -0.4
COL12A1-206ENST00000474564 ADORA1P30542 326 aa12.55□□□□□ -0.4
COL12A1-206ENST00000474564 BCAMP50895 628 aa12.55□□□□□ -0.4
COL12A1-206ENST00000474564 SPTY2D1Q68D10 685 aaPredicted RBP12.55□□□□□ -0.4
COL12A1-206ENST00000474564 SKAP1Q86WV1 359 aa12.55□□□□□ -0.4
COL12A1-206ENST00000474564 COA1Q9GZY4 146 aa12.55□□□□□ -0.4
COL12A1-206ENST00000474564 TLR7Q9NYK1 1049 aaKnown RBP12.55□□□□□ -0.4
COL12A1-206ENST00000474564 MED23Q9ULK4 1368 aa12.55□□□□□ -0.4
COL12A1-206ENST00000474564 RIMBP2O15034 1052 aa12.54□□□□□ -0.4
COL12A1-206ENST00000474564 IGSF3O75054 1194 aa12.54□□□□□ -0.4
COL12A1-206ENST00000474564 CDC45O75419 566 aa12.54□□□□□ -0.4
COL12A1-206ENST00000474564 ARID4AP29374 1257 aaPredicted RBP12.54□□□□□ -0.4
COL12A1-206ENST00000474564 GYG1P46976 350 aa12.54□□□□□ -0.4
COL12A1-206ENST00000474564 FBXO33Q7Z6M2 555 aa12.54□□□□□ -0.4
COL12A1-206ENST00000474564 SPATA5Q8NB90 893 aa12.54□□□□□ -0.4
COL12A1-206ENST00000474564 WDR66Q8TBY9 1149 aa12.54□□□□□ -0.4
COL12A1-206ENST00000474564 PI4K2BQ8TCG2 481 aa12.54□□□□□ -0.4
COL12A1-206ENST00000474564 FAM84BQ96KN1 310 aaPredicted RBP12.54□□□□□ -0.4
COL12A1-206ENST00000474564 PSMD1Q99460 953 aa12.54□□□□□ -0.4
COL12A1-206ENST00000474564 FSD1Q9BTV5 496 aa12.54□□□□□ -0.4
COL12A1-206ENST00000474564 UPF2Q9HAU5 1272 aaKnown RBP12.54□□□□□ -0.4
COL12A1-206ENST00000474564 PAG1Q9NWQ8 432 aa12.54□□□□□ -0.4
COL12A1-206ENST00000474564 SALL3Q9BXA9 1300 aa12.54□□□□□ -0.4
COL12A1-206ENST00000474564 ZFYP08048 801 aaPredicted RBP12.53□□□□□ -0.4
COL12A1-206ENST00000474564 SDSP20132 328 aa12.53□□□□□ -0.4
COL12A1-206ENST00000474564 PHKA1P46020 1223 aa12.53□□□□□ -0.4
COL12A1-206ENST00000474564 MAP3K12Q12852 859 aa12.53□□□□□ -0.4
COL12A1-206ENST00000474564 TSHZ3Q63HK5 1081 aa12.53□□□□□ -0.4
COL12A1-206ENST00000474564 PODNQ7Z5L7 613 aa12.53□□□□□ -0.4
COL12A1-206ENST00000474564 C7orf43Q8WVR3 580 aa12.53□□□□□ -0.4
COL12A1-206ENST00000474564 JDP2Q8WYK2 163 aa12.53□□□□□ -0.4
COL12A1-206ENST00000474564 SYT17Q9BSW7 474 aa12.53□□□□□ -0.4
COL12A1-206ENST00000474564 RTFDC1Q9BY42 306 aaPredicted RBP12.53□□□□□ -0.4
COL12A1-206ENST00000474564 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
COL12A1-206ENST00000474564 DIAPH3Q9NSV4 1193 aa12.53□□□□□ -0.4
COL12A1-206ENST00000474564 LRP2BPQ9P2M1 347 aa12.53□□□□□ -0.4
COL12A1-206ENST00000474564 POLLQ9UGP5 575 aa12.53□□□□□ -0.4
COL12A1-206ENST00000474564 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.53□□□□□ -0.4
COL12A1-206ENST00000474564 SNAP23O00161 211 aa12.52□□□□□ -0.41
COL12A1-206ENST00000474564 GOLIM4O00461 696 aa12.52□□□□□ -0.41
COL12A1-206ENST00000474564 PPIP5K2O43314 1243 aa12.52□□□□□ -0.41
COL12A1-206ENST00000474564 TMED8Q6PL24 325 aaPredicted RBP12.52□□□□□ -0.41
COL12A1-206ENST00000474564 TBC1D22AQ8WUA7 517 aa12.52□□□□□ -0.41
COL12A1-206ENST00000474564 TAOK3Q9H2K8 898 aa12.52□□□□□ -0.41
COL12A1-206ENST00000474564 CD209Q9NNX6 404 aa12.52□□□□□ -0.41
COL12A1-206ENST00000474564 SPEF2Q9C093 1822 aa12.52□□□□□ -0.41
COL12A1-206ENST00000474564 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
COL12A1-206ENST00000474564 ZBTB22O15209 634 aa12.51□□□□□ -0.41
COL12A1-206ENST00000474564 MAP4K4O95819 1239 aaPredicted RBP12.51□□□□□ -0.41
COL12A1-206ENST00000474564 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
COL12A1-206ENST00000474564 KIAA1211Q6ZU35 1233 aa12.51□□□□□ -0.41
COL12A1-206ENST00000474564 ARHGAP27Q6ZUM4 889 aa12.51□□□□□ -0.41
COL12A1-206ENST00000474564 SLF2Q8IX21 1173 aa12.51□□□□□ -0.41
COL12A1-206ENST00000474564 NIM1KQ8IY84 436 aa12.51□□□□□ -0.41
COL12A1-206ENST00000474564 LARGE2Q8N3Y3 721 aa12.51□□□□□ -0.41
COL12A1-206ENST00000474564 KBTBD3Q8NAB2 608 aa12.51□□□□□ -0.41
COL12A1-206ENST00000474564 SNRKQ9NRH2 765 aa12.51□□□□□ -0.41
COL12A1-206ENST00000474564 PDS5AQ29RF7 1337 aaKnown RBP12.51□□□□□ -0.41
COL12A1-206ENST00000474564 IDH1O75874 414 aaKnown RBP12.5□□□□□ -0.41
COL12A1-206ENST00000474564 IL1R1P14778 569 aa12.5□□□□□ -0.41
COL12A1-206ENST00000474564 ZAP70P43403 619 aa12.5□□□□□ -0.41
COL12A1-206ENST00000474564 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
COL12A1-206ENST00000474564 CHAF1AQ13111 956 aaPredicted RBP12.5□□□□□ -0.41
COL12A1-206ENST00000474564 ERICH6Q7L0X2 663 aa12.5□□□□□ -0.41
COL12A1-206ENST00000474564 NLGN2Q8NFZ4 835 aa12.5□□□□□ -0.41
COL12A1-206ENST00000474564 TDRD7Q8NHU6 1098 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms