RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 USP17L4A6NCW7 530 aa15.21■□□□□ 0.03
SMPD4-217ENST00000473720 HUNKP57058 714 aa15.21■□□□□ 0.03
SMPD4-217ENST00000473720 USP17L1Q7RTZ2 530 aa15.21■□□□□ 0.03
SMPD4-217ENST00000473720 MXD3Q9BW11 206 aa15.21■□□□□ 0.03
SMPD4-217ENST00000473720 SCAF8Q9UPN6 1271 aaKnown RBP15.21■□□□□ 0.03
SMPD4-217ENST00000473720 MED23Q9ULK4 1368 aa15.21■□□□□ 0.02
SMPD4-217ENST00000473720 KCNJ4P48050 445 aa15.2■□□□□ 0.02
SMPD4-217ENST00000473720 CASP7P55210 303 aa15.2■□□□□ 0.02
SMPD4-217ENST00000473720 SCARF1Q14162 830 aa15.2■□□□□ 0.02
SMPD4-217ENST00000473720 ANGEL2Q5VTE6 544 aaKnown RBP15.2■□□□□ 0.02
SMPD4-217ENST00000473720 SLC4A10Q6U841 1118 aa15.2■□□□□ 0.02
SMPD4-217ENST00000473720 PODNQ7Z5L7 613 aa15.2■□□□□ 0.02
SMPD4-217ENST00000473720 TXNRD3Q86VQ6 643 aa15.2■□□□□ 0.02
SMPD4-217ENST00000473720 SULF1Q8IWU6 871 aa15.2■□□□□ 0.02
SMPD4-217ENST00000473720 AGBL3Q8NEM8 1001 aa15.2■□□□□ 0.02
SMPD4-217ENST00000473720 GBA2Q9HCG7 927 aaPredicted RBP15.2■□□□□ 0.02
SMPD4-217ENST00000473720 ANKRD18BA2A2Z9 1011 aa15.19■□□□□ 0.02
SMPD4-217ENST00000473720 USP17L8P0C7I0 530 aa15.19■□□□□ 0.02
SMPD4-217ENST00000473720 C2orf69Q8N8R5 385 aa15.19■□□□□ 0.02
SMPD4-217ENST00000473720 HELBQ8NG08 1087 aaPredicted RBP15.19■□□□□ 0.02
SMPD4-217ENST00000473720 PLA2G12BQ9BX93 195 aa15.19■□□□□ 0.02
SMPD4-217ENST00000473720 MYOZ2Q9NPC6 264 aa15.19■□□□□ 0.02
SMPD4-217ENST00000473720 ZNF804BA4D1E1 1349 aa15.18■□□□□ 0.02
SMPD4-217ENST00000473720 MYH13Q9UKX3 1938 aa15.18■□□□□ 0.02
SMPD4-217ENST00000473720 KLRK1P26718 216 aa15.18■□□□□ 0.02
SMPD4-217ENST00000473720 MAP2K2P36507 400 aa15.18■□□□□ 0.02
SMPD4-217ENST00000473720 CHRNDQ07001 517 aa15.18■□□□□ 0.02
SMPD4-217ENST00000473720 BEND3Q5T5X7 828 aa15.18■□□□□ 0.02
SMPD4-217ENST00000473720 LEMD3Q9Y2U8 911 aa15.18■□□□□ 0.02
SMPD4-217ENST00000473720 SNAP23O00161 211 aa15.17■□□□□ 0.02
SMPD4-217ENST00000473720 PLIN1O60240 522 aa15.17■□□□□ 0.02
SMPD4-217ENST00000473720 TAF5LO75529 589 aa15.17■□□□□ 0.02
SMPD4-217ENST00000473720 CSF1RP07333 972 aa15.17■□□□□ 0.02
SMPD4-217ENST00000473720 ZNF280AP59817 542 aaPredicted RBP15.17■□□□□ 0.02
SMPD4-217ENST00000473720 IFIT5Q13325 482 aaKnown RBP15.17■□□□□ 0.02
SMPD4-217ENST00000473720 TAF7LQ5H9L4 462 aa15.17■□□□□ 0.02
SMPD4-217ENST00000473720 CDCA5Q96FF9 252 aa15.17■□□□□ 0.02
SMPD4-217ENST00000473720 HHIPL1Q96JK4 782 aa15.17■□□□□ 0.02
SMPD4-217ENST00000473720 ZIC5Q96T25 663 aa15.17■□□□□ 0.02
SMPD4-217ENST00000473720 GMLQ99445 158 aa15.17■□□□□ 0.02
SMPD4-217ENST00000473720 ANKRD2Q9GZV1 360 aa15.17■□□□□ 0.02
SMPD4-217ENST00000473720 COA1Q9GZY4 146 aa15.17■□□□□ 0.02
SMPD4-217ENST00000473720 ZNF157P51786 506 aaPredicted RBP15.16■□□□□ 0.02
SMPD4-217ENST00000473720 FOXO4P98177 505 aa15.16■□□□□ 0.02
SMPD4-217ENST00000473720 TTLL5Q6EMB2 1281 aa15.16■□□□□ 0.02
SMPD4-217ENST00000473720 RGMBQ6NW40 437 aa15.16■□□□□ 0.02
SMPD4-217ENST00000473720 LMBR1LQ6UX01 489 aa15.16■□□□□ 0.02
SMPD4-217ENST00000473720 ZNF594Q96JF6 807 aaPredicted RBP15.16■□□□□ 0.02
SMPD4-217ENST00000473720 C9orf78Q9NZ63 289 aaPredicted RBP15.16■□□□□ 0.02
SMPD4-217ENST00000473720 PAPPA2Q9BXP8 1791 aa15.16■□□□□ 0.02
SMPD4-217ENST00000473720 GRM8O00222 908 aa15.15■□□□□ 0.02
SMPD4-217ENST00000473720 GTF2IP78347 998 aa15.15■□□□□ 0.02
SMPD4-217ENST00000473720 NBPF9Q3BBW0 867 aa15.15■□□□□ 0.02
SMPD4-217ENST00000473720 DACT2Q5SW24 774 aa15.15■□□□□ 0.02
SMPD4-217ENST00000473720 PRAMEF18Q5VWM3 479 aa15.15■□□□□ 0.02
SMPD4-217ENST00000473720 OGFOD1Q8N543 542 aa15.15■□□□□ 0.02
SMPD4-217ENST00000473720 ZNF609O15014 1411 aa15.15■□□□□ 0.02
SMPD4-217ENST00000473720 NOGQ13253 232 aa15.14■□□□□ 0.01
SMPD4-217ENST00000473720 CCDC57Q2TAC2 916 aa15.14■□□□□ 0.01
SMPD4-217ENST00000473720 EPHA10Q5JZY3 1008 aa15.14■□□□□ 0.01
SMPD4-217ENST00000473720 STRIP1Q5VSL9 837 aa15.14■□□□□ 0.01
SMPD4-217ENST00000473720 KIAA0825Q8IV33 1275 aa15.14■□□□□ 0.01
SMPD4-217ENST00000473720 SASH1O94885 1247 aa15.13■□□□□ 0.01
SMPD4-217ENST00000473720 BRPF1P55201 1214 aaPredicted RBP15.13■□□□□ 0.01
SMPD4-217ENST00000473720 SRCIN1Q9C0H9 1055 aa15.13■□□□□ 0.01
SMPD4-217ENST00000473720 CNNM1Q9NRU3 951 aa15.13■□□□□ 0.01
SMPD4-217ENST00000473720 MYO3BQ8WXR4 1341 aa15.13■□□□□ 0.01
SMPD4-217ENST00000473720 ARAP2Q8WZ64 1704 aa15.12■□□□□ 0.01
SMPD4-217ENST00000473720 F8W031 263 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-217ENST00000473720 TTLL12Q14166 644 aaPredicted RBP15.12■□□□□ 0.01
SMPD4-217ENST00000473720 LDHAL6AQ6ZMR3 332 aa15.12■□□□□ 0.01
SMPD4-217ENST00000473720 MOB2Q70IA6 237 aa15.12■□□□□ 0.01
SMPD4-217ENST00000473720 CD209Q9NNX6 404 aa15.12■□□□□ 0.01
SMPD4-217ENST00000473720 JAG2Q9Y219 1238 aa15.12■□□□□ 0.01
SMPD4-217ENST00000473720 FAM155AB1AL88 458 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-217ENST00000473720 WNT10BO00744 389 aa15.11■□□□□ 0.01
SMPD4-217ENST00000473720 ALDH1L1O75891 902 aa15.11■□□□□ 0.01
SMPD4-217ENST00000473720 CCDC102AQ96A19 550 aa15.11■□□□□ 0.01
SMPD4-217ENST00000473720 SUCLG2Q96I99 432 aa15.11■□□□□ 0.01
SMPD4-217ENST00000473720 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.11■□□□□ 0.01
SMPD4-217ENST00000473720 HDAC9Q9UKV0 1011 aa15.11■□□□□ 0.01
SMPD4-217ENST00000473720 PITPNM2Q9BZ72 1349 aa15.11■□□□□ 0.01
SMPD4-217ENST00000473720 AK9Q5TCS8 1911 aa15.1■□□□□ 0.01
SMPD4-217ENST00000473720 CA12O43570 354 aa15.1■□□□□ 0.01
SMPD4-217ENST00000473720 KIF23Q02241 960 aaPredicted RBP15.1■□□□□ 0.01
SMPD4-217ENST00000473720 PRKG1Q13976 671 aa15.1■□□□□ 0.01
SMPD4-217ENST00000473720 ZNF804AQ7Z570 1209 aa15.1■□□□□ 0.01
SMPD4-217ENST00000473720 ABHD8Q96I13 439 aa15.1■□□□□ 0.01
SMPD4-217ENST00000473720 ZNF521Q96K83 1311 aa15.1■□□□□ 0.01
SMPD4-217ENST00000473720 SLC10A3P09131 477 aa15.09■□□□□ 0.01
SMPD4-217ENST00000473720 NBPF7P0C2Y1 421 aaPredicted RBP15.09■□□□□ 0.01
SMPD4-217ENST00000473720 MRPL50Q8N5N7 158 aaKnown RBP15.09■□□□□ 0.01
SMPD4-217ENST00000473720 UBE2Q2LH0YL09 131 aa15.08■□□□□ 0
SMPD4-217ENST00000473720 TRPA1O75762 1119 aa15.08■□□□□ 0
SMPD4-217ENST00000473720 NF2P35240 595 aa15.08■□□□□ 0
SMPD4-217ENST00000473720 PUS3Q9BZE2 481 aaKnown RBP15.08■□□□□ 0
SMPD4-217ENST00000473720 PCDHAC2Q9Y5I4 1007 aa15.08■□□□□ 0
SMPD4-217ENST00000473720 CCDC85CA6NKD9 419 aa15.07■□□□□ 0
SMPD4-217ENST00000473720 E9PSI1 815 aa15.07■□□□□ 0
SMPD4-217ENST00000473720 RBM5P52756 815 aaKnown RBP eCLIP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms