RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 YDJCA8MPS7 323 aa25.76■■□□□ 1.71
TOP3A-204ENST00000472959 KLRK1P26718 216 aa25.76■■□□□ 1.71
TOP3A-204ENST00000472959 CXCL9Q07325 125 aa25.76■■□□□ 1.71
TOP3A-204ENST00000472959 TNIP1Q15025 636 aa25.76■■□□□ 1.71
TOP3A-204ENST00000472959 TXNRD3Q86VQ6 643 aa25.76■■□□□ 1.71
TOP3A-204ENST00000472959 ZNF526Q8TF50 670 aaPredicted RBP25.76■■□□□ 1.71
TOP3A-204ENST00000472959 SURF6O75683 361 aaKnown RBP25.75■■□□□ 1.71
TOP3A-204ENST00000472959 DDNO94850 711 aaPredicted RBP25.75■■□□□ 1.71
TOP3A-204ENST00000472959 CIAPIN1Q6FI81 312 aa25.75■■□□□ 1.71
TOP3A-204ENST00000472959 ZNF804AQ7Z570 1209 aa25.75■■□□□ 1.71
TOP3A-204ENST00000472959 IFIT1P09914 478 aaKnown RBP25.74■■□□□ 1.71
TOP3A-204ENST00000472959 FGFR2P21802 821 aa25.74■■□□□ 1.71
TOP3A-204ENST00000472959 AAMPQ13685 434 aa25.74■■□□□ 1.71
TOP3A-204ENST00000472959 LPIN2Q92539 896 aa25.74■■□□□ 1.71
TOP3A-204ENST00000472959 RAD17O75943 681 aa25.73■■□□□ 1.71
TOP3A-204ENST00000472959 SIRT2Q8IXJ6 389 aa25.73■■□□□ 1.71
TOP3A-204ENST00000472959 L3MBTL3Q96JM7 780 aaPredicted RBP25.73■■□□□ 1.71
TOP3A-204ENST00000472959 SLC5A1P13866 664 aa25.72■■□□□ 1.71
TOP3A-204ENST00000472959 OS9Q13438 667 aaPredicted RBP25.72■■□□□ 1.71
TOP3A-204ENST00000472959 AKAP2Q9Y2D5 859 aa25.72■■□□□ 1.71
TOP3A-204ENST00000472959 GJA3Q9Y6H8 435 aa25.72■■□□□ 1.71
TOP3A-204ENST00000472959 TFCP2Q12800 502 aa25.71■■□□□ 1.71
TOP3A-204ENST00000472959 ATP2B3Q16720 1220 aa25.71■■□□□ 1.71
TOP3A-204ENST00000472959 HSP90AB4PQ58FF6 505 aa25.71■■□□□ 1.71
TOP3A-204ENST00000472959 CAVIN4Q5BKX8 364 aa25.71■■□□□ 1.71
TOP3A-204ENST00000472959 FAM84BQ96KN1 310 aaPredicted RBP25.71■■□□□ 1.71
TOP3A-204ENST00000472959 CD209Q9NNX6 404 aa25.71■■□□□ 1.71
TOP3A-204ENST00000472959 HIBADHP31937 336 aaKnown RBP25.7■■□□□ 1.7
TOP3A-204ENST00000472959 KCNQ5Q9NR82 932 aa25.7■■□□□ 1.7
TOP3A-204ENST00000472959 SASH1O94885 1247 aa25.69■■□□□ 1.7
TOP3A-204ENST00000472959 IL1R1P14778 569 aa25.69■■□□□ 1.7
TOP3A-204ENST00000472959 VEGFAP15692 232 aaPredicted RBP25.69■■□□□ 1.7
TOP3A-204ENST00000472959 FBXO33Q7Z6M2 555 aa25.69■■□□□ 1.7
TOP3A-204ENST00000472959 VPS37DQ86XT2 251 aa25.69■■□□□ 1.7
TOP3A-204ENST00000472959 RRAGCQ9HB90 399 aa25.69■■□□□ 1.7
TOP3A-204ENST00000472959 NMRK2Q9NPI5 230 aa25.69■■□□□ 1.7
TOP3A-204ENST00000472959 A0A1B0GUL6 1792 aa25.69■■□□□ 1.7
TOP3A-204ENST00000472959 IQCA1LA6NCM1 817 aa25.68■■□□□ 1.7
TOP3A-204ENST00000472959 USP17L3A6NCW0 530 aa25.68■■□□□ 1.7
TOP3A-204ENST00000472959 USP17L4A6NCW7 530 aa25.68■■□□□ 1.7
TOP3A-204ENST00000472959 PSMD14O00487 310 aa25.68■■□□□ 1.7
TOP3A-204ENST00000472959 VIL1P09327 827 aaKnown RBP25.68■■□□□ 1.7
TOP3A-204ENST00000472959 GYG1P46976 350 aa25.68■■□□□ 1.7
TOP3A-204ENST00000472959 USP17L1Q7RTZ2 530 aa25.68■■□□□ 1.7
TOP3A-204ENST00000472959 ERC1Q8IUD2 1116 aa25.68■■□□□ 1.7
TOP3A-204ENST00000472959 STRIP1Q5VSL9 837 aa25.67■■□□□ 1.7
TOP3A-204ENST00000472959 GPR108Q9NPR9 543 aa25.67■■□□□ 1.7
TOP3A-204ENST00000472959 RPS12P25398 132 aaKnown RBP25.66■■□□□ 1.7
TOP3A-204ENST00000472959 TDRD7Q8NHU6 1098 aaKnown RBP25.66■■□□□ 1.7
TOP3A-204ENST00000472959 EXOC6BQ9Y2D4 811 aa25.66■■□□□ 1.7
TOP3A-204ENST00000472959 POTECB2RU33 542 aa25.65■■□□□ 1.7
TOP3A-204ENST00000472959 GMPSP49915 693 aaPredicted RBP25.65■■□□□ 1.7
TOP3A-204ENST00000472959 DPF2Q92785 391 aa25.65■■□□□ 1.7
TOP3A-204ENST00000472959 HACL1Q9UJ83 578 aa25.65■■□□□ 1.7
TOP3A-204ENST00000472959 PCDHB15Q9Y5E8 787 aa25.65■■□□□ 1.7
TOP3A-204ENST00000472959 WDR90Q96KV7 1748 aa25.64■■□□□ 1.7
TOP3A-204ENST00000472959 A0A1B0GUL7 405 aa25.64■■□□□ 1.7
TOP3A-204ENST00000472959 RAB11FIP3O75154 756 aa25.64■■□□□ 1.7
TOP3A-204ENST00000472959 LMOD1P29536 600 aaPredicted RBP25.64■■□□□ 1.7
TOP3A-204ENST00000472959 BCAMP50895 628 aa25.64■■□□□ 1.7
TOP3A-204ENST00000472959 SCNN1DP51172 638 aa25.64■■□□□ 1.7
TOP3A-204ENST00000472959 TIMM10P62072 90 aa25.64■■□□□ 1.7
TOP3A-204ENST00000472959 TTLL5Q6EMB2 1281 aa25.64■■□□□ 1.7
TOP3A-204ENST00000472959 RSBN1LQ6PCB5 846 aaPredicted RBP25.64■■□□□ 1.7
TOP3A-204ENST00000472959 DACT2Q5SW24 774 aa25.63■■□□□ 1.69
TOP3A-204ENST00000472959 AGBL3Q8NEM8 1001 aa25.63■■□□□ 1.69
TOP3A-204ENST00000472959 EXOC6Q8TAG9 804 aa25.63■■□□□ 1.69
TOP3A-204ENST00000472959 GPRC5DQ9NZD1 345 aa25.63■■□□□ 1.69
TOP3A-204ENST00000472959 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.63■■□□□ 1.69
TOP3A-204ENST00000472959 KIF3CO14782 793 aa25.62■■□□□ 1.69
TOP3A-204ENST00000472959 GTF2IP78347 998 aa25.62■■□□□ 1.69
TOP3A-204ENST00000472959 NEUROD6Q96NK8 337 aa25.62■■□□□ 1.69
TOP3A-204ENST00000472959 GNL3LQ9NVN8 582 aaKnown RBP25.62■■□□□ 1.69
TOP3A-204ENST00000472959 ZBTB12Q9Y330 459 aaPredicted RBP25.62■■□□□ 1.69
TOP3A-204ENST00000472959 ZNF609O15014 1411 aa25.62■■□□□ 1.69
TOP3A-204ENST00000472959 MYO3BQ8WXR4 1341 aa25.62■■□□□ 1.69
TOP3A-204ENST00000472959 TNNI3KQ59H18 835 aa25.61■■□□□ 1.69
TOP3A-204ENST00000472959 FBXW7Q969H0 707 aa25.61■■□□□ 1.69
TOP3A-204ENST00000472959 KIF1BPQ96EK5 621 aa25.61■■□□□ 1.69
TOP3A-204ENST00000472959 XAGE2Q96GT9 111 aa25.61■■□□□ 1.69
TOP3A-204ENST00000472959 FPGT-TNNI3KV9GXZ4 949 aa25.61■■□□□ 1.69
TOP3A-204ENST00000472959 FAM205AQ6ZU69 1335 aa25.61■■□□□ 1.69
TOP3A-204ENST00000472959 ZBTB22O15209 634 aa25.6■■□□□ 1.69
TOP3A-204ENST00000472959 FRAT2O75474 233 aaPredicted RBP25.6■■□□□ 1.69
TOP3A-204ENST00000472959 ADORA1P30542 326 aa25.6■■□□□ 1.69
TOP3A-204ENST00000472959 RHPN1Q8TCX5 695 aa25.6■■□□□ 1.69
TOP3A-204ENST00000472959 TAF1DQ9H5J8 278 aaPredicted RBP25.6■■□□□ 1.69
TOP3A-204ENST00000472959 CENPBP07199 599 aaPredicted RBP25.59■■□□□ 1.69
TOP3A-204ENST00000472959 EPHX2P34913 555 aa25.59■■□□□ 1.69
TOP3A-204ENST00000472959 FKBP1AP62942 108 aaKnown RBP25.59■■□□□ 1.69
TOP3A-204ENST00000472959 C16orf71Q8IYS4 520 aaPredicted RBP25.59■■□□□ 1.69
TOP3A-204ENST00000472959 GMLQ99445 158 aa25.59■■□□□ 1.69
TOP3A-204ENST00000472959 DCTPP1Q9H773 170 aa25.59■■□□□ 1.69
TOP3A-204ENST00000472959 CNOT7Q9UIV1 285 aaKnown RBP25.59■■□□□ 1.69
TOP3A-204ENST00000472959 SCN9AQ15858 1988 aa25.58■■□□□ 1.69
TOP3A-204ENST00000472959 H7C1D1 291 aa25.58■■□□□ 1.69
TOP3A-204ENST00000472959 EPS15P42566 896 aa25.58■■□□□ 1.69
TOP3A-204ENST00000472959 GORABQ5T7V8 394 aa25.58■■□□□ 1.69
TOP3A-204ENST00000472959 CCDC102BQ68D86 513 aa25.58■■□□□ 1.69
TOP3A-204ENST00000472959 PNMA8AQ86V59 439 aaPredicted RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms