RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 USP17L1Q7RTZ2 530 aa19.46■□□□□ 0.71
VTI1A-203ENST00000472892 DCPSQ96C86 337 aaKnown RBP19.46■□□□□ 0.71
VTI1A-203ENST00000472892 MAP2K2P36507 400 aa19.45■□□□□ 0.7
VTI1A-203ENST00000472892 FOXO4P98177 505 aa19.45■□□□□ 0.7
VTI1A-203ENST00000472892 DLK2Q6UY11 383 aa19.45■□□□□ 0.7
VTI1A-203ENST00000472892 KRT26Q7Z3Y9 468 aa19.45■□□□□ 0.7
VTI1A-203ENST00000472892 MPHOSPH8Q99549 860 aa19.45■□□□□ 0.7
VTI1A-203ENST00000472892 ANKRD2Q9GZV1 360 aa19.45■□□□□ 0.7
VTI1A-203ENST00000472892 ZNF408Q9H9D4 720 aa19.45■□□□□ 0.7
VTI1A-203ENST00000472892 USP17L8P0C7I0 530 aa19.44■□□□□ 0.7
VTI1A-203ENST00000472892 TXNRD3Q86VQ6 643 aa19.44■□□□□ 0.7
VTI1A-203ENST00000472892 COA1Q9GZY4 146 aa19.44■□□□□ 0.7
VTI1A-203ENST00000472892 ANKRD18BA2A2Z9 1011 aa19.43■□□□□ 0.7
VTI1A-203ENST00000472892 GRM1Q13255 1194 aa19.43■□□□□ 0.7
VTI1A-203ENST00000472892 ZNF804BA4D1E1 1349 aa19.43■□□□□ 0.7
VTI1A-203ENST00000472892 LBX1P52954 281 aa19.42■□□□□ 0.7
VTI1A-203ENST00000472892 SCARF1Q14162 830 aa19.42■□□□□ 0.7
VTI1A-203ENST00000472892 DACT2Q5SW24 774 aa19.42■□□□□ 0.7
VTI1A-203ENST00000472892 THSD7BQ9C0I4 1608 aa19.41■□□□□ 0.7
VTI1A-203ENST00000472892 ADM5C9JUS6 153 aa19.41■□□□□ 0.7
VTI1A-203ENST00000472892 GRM8O00222 908 aa19.41■□□□□ 0.7
VTI1A-203ENST00000472892 AOC2O75106 756 aa19.41■□□□□ 0.7
VTI1A-203ENST00000472892 ALDH1L1O75891 902 aa19.41■□□□□ 0.7
VTI1A-203ENST00000472892 HSPA8P11142 646 aaKnown RBP19.41■□□□□ 0.7
VTI1A-203ENST00000472892 CHRNDQ07001 517 aa19.41■□□□□ 0.7
VTI1A-203ENST00000472892 IFIT5Q13325 482 aaKnown RBP19.41■□□□□ 0.7
VTI1A-203ENST00000472892 STRIP1Q5VSL9 837 aa19.41■□□□□ 0.7
VTI1A-203ENST00000472892 SULF1Q8IWU6 871 aa19.41■□□□□ 0.7
VTI1A-203ENST00000472892 MYOZ2Q9NPC6 264 aa19.41■□□□□ 0.7
VTI1A-203ENST00000472892 GGA3Q9NZ52 723 aa19.41■□□□□ 0.7
VTI1A-203ENST00000472892 ASTN2O75129 1339 aaPredicted RBP19.41■□□□□ 0.7
VTI1A-203ENST00000472892 PSME4Q14997 1843 aa19.4■□□□□ 0.7
VTI1A-203ENST00000472892 KLRK1P26718 216 aa19.4■□□□□ 0.7
VTI1A-203ENST00000472892 EPHA10Q5JZY3 1008 aa19.4■□□□□ 0.7
VTI1A-203ENST00000472892 SPEF2Q9C093 1822 aa19.39■□□□□ 0.7
VTI1A-203ENST00000472892 HUNKP57058 714 aa19.39■□□□□ 0.69
VTI1A-203ENST00000472892 ANGEL2Q5VTE6 544 aaKnown RBP19.39■□□□□ 0.69
VTI1A-203ENST00000472892 LMBR1LQ6UX01 489 aa19.39■□□□□ 0.69
VTI1A-203ENST00000472892 BEGAINQ9BUH8 593 aa19.39■□□□□ 0.69
VTI1A-203ENST00000472892 MXD3Q9BW11 206 aa19.39■□□□□ 0.69
VTI1A-203ENST00000472892 GBA2Q9HCG7 927 aaPredicted RBP19.39■□□□□ 0.69
VTI1A-203ENST00000472892 POLR2AP24928 1970 aaKnown RBP19.38■□□□□ 0.69
VTI1A-203ENST00000472892 MMP14P50281 582 aa19.38■□□□□ 0.69
VTI1A-203ENST00000472892 SLC4A10Q6U841 1118 aa19.38■□□□□ 0.69
VTI1A-203ENST00000472892 C15orf52Q6ZUT6 534 aaKnown RBP19.38■□□□□ 0.69
VTI1A-203ENST00000472892 C2orf69Q8N8R5 385 aa19.38■□□□□ 0.69
VTI1A-203ENST00000472892 MYO3BQ8WXR4 1341 aa19.38■□□□□ 0.69
VTI1A-203ENST00000472892 SRCIN1Q9C0H9 1055 aa19.38■□□□□ 0.69
VTI1A-203ENST00000472892 C9orf78Q9NZ63 289 aaPredicted RBP19.38■□□□□ 0.69
VTI1A-203ENST00000472892 PITPNM2Q9BZ72 1349 aa19.37■□□□□ 0.69
VTI1A-203ENST00000472892 IRS2Q9Y4H2 1338 aa19.37■□□□□ 0.69
VTI1A-203ENST00000472892 E9PSI1 815 aa19.37■□□□□ 0.69
VTI1A-203ENST00000472892 KCNJ4P48050 445 aa19.37■□□□□ 0.69
VTI1A-203ENST00000472892 TTLL5Q6EMB2 1281 aa19.37■□□□□ 0.69
VTI1A-203ENST00000472892 MRPL50Q8N5N7 158 aaKnown RBP19.37■□□□□ 0.69
VTI1A-203ENST00000472892 CHMP3Q9Y3E7 222 aa19.37■□□□□ 0.69
VTI1A-203ENST00000472892 TAF5LO75529 589 aa19.36■□□□□ 0.69
VTI1A-203ENST00000472892 CAPN15O75808 1086 aa19.36■□□□□ 0.69
VTI1A-203ENST00000472892 BRPF1P55201 1214 aaPredicted RBP19.36■□□□□ 0.69
VTI1A-203ENST00000472892 NOGQ13253 232 aa19.36■□□□□ 0.69
VTI1A-203ENST00000472892 CCDC57Q2TAC2 916 aa19.36■□□□□ 0.69
VTI1A-203ENST00000472892 RGMBQ6NW40 437 aa19.36■□□□□ 0.69
VTI1A-203ENST00000472892 OGFOD1Q8N543 542 aa19.36■□□□□ 0.69
VTI1A-203ENST00000472892 HELBQ8NG08 1087 aaPredicted RBP19.36■□□□□ 0.69
VTI1A-203ENST00000472892 CDCA5Q96FF9 252 aa19.36■□□□□ 0.69
VTI1A-203ENST00000472892 CD209Q9NNX6 404 aa19.36■□□□□ 0.69
VTI1A-203ENST00000472892 UTYO14607 1347 aa19.35■□□□□ 0.69
VTI1A-203ENST00000472892 SNAP23O00161 211 aa19.35■□□□□ 0.69
VTI1A-203ENST00000472892 SLFN5Q08AF3 891 aa19.35■□□□□ 0.69
VTI1A-203ENST00000472892 NBPF9Q3BBW0 867 aa19.35■□□□□ 0.69
VTI1A-203ENST00000472892 FBXW7Q969H0 707 aa19.35■□□□□ 0.69
VTI1A-203ENST00000472892 KAZALD1Q96I82 304 aa19.35■□□□□ 0.69
VTI1A-203ENST00000472892 ZNF594Q96JF6 807 aaPredicted RBP19.35■□□□□ 0.69
VTI1A-203ENST00000472892 FAM155AB1AL88 458 aaPredicted RBP19.34■□□□□ 0.69
VTI1A-203ENST00000472892 CA12O43570 354 aa19.34■□□□□ 0.69
VTI1A-203ENST00000472892 NBPF7P0C2Y1 421 aaPredicted RBP19.34■□□□□ 0.69
VTI1A-203ENST00000472892 GTF2IP78347 998 aa19.34■□□□□ 0.69
VTI1A-203ENST00000472892 LDHAL6AQ6ZMR3 332 aa19.34■□□□□ 0.69
VTI1A-203ENST00000472892 CCDC102AQ96A19 550 aa19.34■□□□□ 0.69
VTI1A-203ENST00000472892 ZIC5Q96T25 663 aa19.34■□□□□ 0.69
VTI1A-203ENST00000472892 PTPRCP08575 1304 aa19.33■□□□□ 0.69
VTI1A-203ENST00000472892 WNT10BO00744 389 aa19.33■□□□□ 0.68
VTI1A-203ENST00000472892 SUCLG2Q96I99 432 aa19.33■□□□□ 0.68
VTI1A-203ENST00000472892 ZNF646O15015 1829 aaPredicted RBP19.32■□□□□ 0.68
VTI1A-203ENST00000472892 IL1R1P14778 569 aa19.32■□□□□ 0.68
VTI1A-203ENST00000472892 FKBP1BP68106 108 aa19.32■□□□□ 0.68
VTI1A-203ENST00000472892 TAF7LQ5H9L4 462 aa19.32■□□□□ 0.68
VTI1A-203ENST00000472892 SSH1Q8WYL5 1049 aa19.32■□□□□ 0.68
VTI1A-203ENST00000472892 CNNM1Q9NRU3 951 aa19.32■□□□□ 0.68
VTI1A-203ENST00000472892 ZNF157P51786 506 aaPredicted RBP19.31■□□□□ 0.68
VTI1A-203ENST00000472892 KIAA0825Q8IV33 1275 aa19.31■□□□□ 0.68
VTI1A-203ENST00000472892 TRMT2AQ8IZ69 625 aaKnown RBP19.31■□□□□ 0.68
VTI1A-203ENST00000472892 ZBED3Q96IU2 234 aaPredicted RBP19.31■□□□□ 0.68
VTI1A-203ENST00000472892 HDAC9Q9UKV0 1011 aa19.31■□□□□ 0.68
VTI1A-203ENST00000472892 RABL6Q3YEC7 729 aaPredicted RBP19.3■□□□□ 0.68
VTI1A-203ENST00000472892 ZNF804AQ7Z570 1209 aa19.3■□□□□ 0.68
VTI1A-203ENST00000472892 CDCA7LQ96GN5 454 aa19.3■□□□□ 0.68
VTI1A-203ENST00000472892 TSKSQ9UJT2 592 aa19.3■□□□□ 0.68
VTI1A-203ENST00000472892 SCAF8Q9UPN6 1271 aaKnown RBP19.3■□□□□ 0.68
VTI1A-203ENST00000472892 PLIN1O60240 522 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms