RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 DEFB115Q30KQ5 88 aa24.41■■□□□ 1.5
COMMD1-208ENST00000472729 ZNF804AQ7Z570 1209 aa24.41■■□□□ 1.5
COMMD1-208ENST00000472729 BICC1Q9H694 974 aaKnown RBP24.41■■□□□ 1.5
COMMD1-208ENST00000472729 ZNF408Q9H9D4 720 aa24.41■■□□□ 1.5
COMMD1-208ENST00000472729 PGAP2Q9UHJ9 254 aa24.41■■□□□ 1.5
COMMD1-208ENST00000472729 STRIP1Q5VSL9 837 aa24.4■■□□□ 1.5
COMMD1-208ENST00000472729 GLIS2Q9BZE0 524 aaPredicted RBP24.4■■□□□ 1.5
COMMD1-208ENST00000472729 MYO3BQ8WXR4 1341 aa24.39■■□□□ 1.5
COMMD1-208ENST00000472729 KIF16BQ96L93 1317 aa24.39■■□□□ 1.5
COMMD1-208ENST00000472729 IPO8O15397 1037 aaKnown RBP24.39■■□□□ 1.49
COMMD1-208ENST00000472729 CELF2O95319 508 aaKnown RBP24.39■■□□□ 1.49
COMMD1-208ENST00000472729 TTLL5Q6EMB2 1281 aa24.39■■□□□ 1.49
COMMD1-208ENST00000472729 UBTFL1P0CB47 393 aaPredicted RBP24.38■■□□□ 1.49
COMMD1-208ENST00000472729 RARSP54136 660 aaKnown RBP24.38■■□□□ 1.49
COMMD1-208ENST00000472729 KRT26Q7Z3Y9 468 aa24.38■■□□□ 1.49
COMMD1-208ENST00000472729 USP48Q86UV5 1035 aa24.38■■□□□ 1.49
COMMD1-208ENST00000472729 TXNRD3Q86VQ6 643 aa24.38■■□□□ 1.49
COMMD1-208ENST00000472729 SULF1Q8IWU6 871 aa24.38■■□□□ 1.49
COMMD1-208ENST00000472729 USP44Q9H0E7 712 aa24.38■■□□□ 1.49
COMMD1-208ENST00000472729 CNTNAP1P78357 1384 aa24.38■■□□□ 1.49
COMMD1-208ENST00000472729 HDAC9Q9UKV0 1011 aa24.37■■□□□ 1.49
COMMD1-208ENST00000472729 LTBP1Q14766 1721 aa24.37■■□□□ 1.49
COMMD1-208ENST00000472729 BRPF1P55201 1214 aaPredicted RBP24.36■■□□□ 1.49
COMMD1-208ENST00000472729 GTF2IP78347 998 aa24.36■■□□□ 1.49
COMMD1-208ENST00000472729 MYOZ2Q9NPC6 264 aa24.36■■□□□ 1.49
COMMD1-208ENST00000472729 MROH5Q6ZUA9 1318 aa24.35■■□□□ 1.49
COMMD1-208ENST00000472729 KLRK1P26718 216 aa24.35■■□□□ 1.49
COMMD1-208ENST00000472729 MMP14P50281 582 aa24.35■■□□□ 1.49
COMMD1-208ENST00000472729 ZNF280AP59817 542 aaPredicted RBP24.35■■□□□ 1.49
COMMD1-208ENST00000472729 FMR1Q06787 632 aaKnown RBP eCLIP24.35■■□□□ 1.49
COMMD1-208ENST00000472729 RABL6Q3YEC7 729 aaPredicted RBP24.35■■□□□ 1.49
COMMD1-208ENST00000472729 FRAT1Q92837 279 aaPredicted RBP24.35■■□□□ 1.49
COMMD1-208ENST00000472729 KAZALD1Q96I82 304 aa24.35■■□□□ 1.49
COMMD1-208ENST00000472729 CD209Q9NNX6 404 aa24.35■■□□□ 1.49
COMMD1-208ENST00000472729 RASSF10A6NK89 507 aa24.34■■□□□ 1.49
COMMD1-208ENST00000472729 ECE1P42892 770 aa24.34■■□□□ 1.49
COMMD1-208ENST00000472729 VEGFBP49765 207 aa24.34■■□□□ 1.49
COMMD1-208ENST00000472729 GRM1Q13255 1194 aa24.34■■□□□ 1.49
COMMD1-208ENST00000472729 SCARF1Q14162 830 aa24.34■■□□□ 1.49
COMMD1-208ENST00000472729 METTL24Q5JXM2 366 aa24.34■■□□□ 1.49
COMMD1-208ENST00000472729 DACT2Q5SW24 774 aa24.34■■□□□ 1.49
COMMD1-208ENST00000472729 C15orf52Q6ZUT6 534 aaKnown RBP24.34■■□□□ 1.49
COMMD1-208ENST00000472729 VPS37DQ86XT2 251 aa24.34■■□□□ 1.49
COMMD1-208ENST00000472729 ARHGAP45Q92619 1136 aa24.34■■□□□ 1.49
COMMD1-208ENST00000472729 GGA3Q9NZ52 723 aa24.34■■□□□ 1.49
COMMD1-208ENST00000472729 SNAP23O00161 211 aa24.33■■□□□ 1.49
COMMD1-208ENST00000472729 EGFRP00533 1210 aa24.33■■□□□ 1.49
COMMD1-208ENST00000472729 UBE4AQ14139 1066 aa24.33■■□□□ 1.49
COMMD1-208ENST00000472729 CST9Q5W186 159 aa24.33■■□□□ 1.49
COMMD1-208ENST00000472729 AIDAQ96BJ3 306 aa24.33■■□□□ 1.49
COMMD1-208ENST00000472729 ADAMTSL1Q8N6G6 1762 aa24.33■■□□□ 1.49
COMMD1-208ENST00000472729 MYH3P11055 1940 aa24.32■■□□□ 1.48
COMMD1-208ENST00000472729 ANKRD44Q8N8A2 993 aa24.32■■□□□ 1.48
COMMD1-208ENST00000472729 GMLQ99445 158 aa24.32■■□□□ 1.48
COMMD1-208ENST00000472729 HSPA1AP0DMV8 641 aaKnown RBP24.31■■□□□ 1.48
COMMD1-208ENST00000472729 HSPA1BP0DMV9 641 aaKnown RBP24.31■■□□□ 1.48
COMMD1-208ENST00000472729 ANGEL2Q5VTE6 544 aaKnown RBP24.31■■□□□ 1.48
COMMD1-208ENST00000472729 MXD3Q9BW11 206 aa24.31■■□□□ 1.48
COMMD1-208ENST00000472729 PUS3Q9BZE2 481 aaKnown RBP24.31■■□□□ 1.48
COMMD1-208ENST00000472729 TLL2Q9Y6L7 1015 aa24.31■■□□□ 1.48
COMMD1-208ENST00000472729 FRAT2O75474 233 aaPredicted RBP24.3■■□□□ 1.48
COMMD1-208ENST00000472729 CAVIN4Q5BKX8 364 aa24.3■■□□□ 1.48
COMMD1-208ENST00000472729 KIAA0825Q8IV33 1275 aa24.3■■□□□ 1.48
COMMD1-208ENST00000472729 C2orf69Q8N8R5 385 aa24.3■■□□□ 1.48
COMMD1-208ENST00000472729 ZNF609O15014 1411 aa24.29■■□□□ 1.48
COMMD1-208ENST00000472729 HIBADHP31937 336 aaKnown RBP24.29■■□□□ 1.48
COMMD1-208ENST00000472729 RIPOR2Q9Y4F9 1068 aa24.29■■□□□ 1.48
COMMD1-208ENST00000472729 WDR33Q9C0J8 1336 aaKnown RBP24.29■■□□□ 1.48
COMMD1-208ENST00000472729 ADM5C9JUS6 153 aa24.28■■□□□ 1.48
COMMD1-208ENST00000472729 GNAI3P08754 354 aa24.28■■□□□ 1.48
COMMD1-208ENST00000472729 IL1R1P14778 569 aa24.28■■□□□ 1.48
COMMD1-208ENST00000472729 CAPNS2Q96L46 248 aa24.28■■□□□ 1.48
COMMD1-208ENST00000472729 BEGAINQ9BUH8 593 aa24.28■■□□□ 1.48
COMMD1-208ENST00000472729 MAP2K1Q02750 393 aaPredicted RBP24.27■■□□□ 1.48
COMMD1-208ENST00000472729 SAPCD2Q86UD0 394 aa24.27■■□□□ 1.48
COMMD1-208ENST00000472729 SASH1O94885 1247 aa24.26■■□□□ 1.47
COMMD1-208ENST00000472729 PDE8BO95263 885 aa24.26■■□□□ 1.47
COMMD1-208ENST00000472729 GYG1P46976 350 aa24.26■■□□□ 1.47
COMMD1-208ENST00000472729 LRRC24Q50LG9 513 aa24.26■■□□□ 1.47
COMMD1-208ENST00000472729 ATF7IPQ6VMQ6 1270 aa24.26■■□□□ 1.47
COMMD1-208ENST00000472729 KLHDC4Q8TBB5 520 aa24.26■■□□□ 1.47
COMMD1-208ENST00000472729 BCAR3O75815 825 aa24.25■■□□□ 1.47
COMMD1-208ENST00000472729 IFIT1P09914 478 aaKnown RBP24.25■■□□□ 1.47
COMMD1-208ENST00000472729 DLGAP5Q15398 846 aa24.25■■□□□ 1.47
COMMD1-208ENST00000472729 INTS3Q68E01 1043 aaKnown RBP24.25■■□□□ 1.47
COMMD1-208ENST00000472729 CYP4F22Q6NT55 531 aa24.25■■□□□ 1.47
COMMD1-208ENST00000472729 GBA2Q9HCG7 927 aaPredicted RBP24.25■■□□□ 1.47
COMMD1-208ENST00000472729 LRRFIP2Q9Y608 721 aaKnown RBP24.25■■□□□ 1.47
COMMD1-208ENST00000472729 F8W031 263 aaPredicted RBP24.24■■□□□ 1.47
COMMD1-208ENST00000472729 EYA2O00167 538 aa24.24■■□□□ 1.47
COMMD1-208ENST00000472729 MYO1BO43795 1136 aa24.24■■□□□ 1.47
COMMD1-208ENST00000472729 RBM5P52756 815 aaKnown RBP eCLIP24.24■■□□□ 1.47
COMMD1-208ENST00000472729 HUNKP57058 714 aa24.24■■□□□ 1.47
COMMD1-208ENST00000472729 PUM3Q15397 648 aaKnown RBP24.24■■□□□ 1.47
COMMD1-208ENST00000472729 NBPF9Q3BBW0 867 aa24.24■■□□□ 1.47
COMMD1-208ENST00000472729 ZKSCAN2Q63HK3 967 aa24.24■■□□□ 1.47
COMMD1-208ENST00000472729 HHIPL1Q96JK4 782 aa24.24■■□□□ 1.47
COMMD1-208ENST00000472729 JAG2Q9Y219 1238 aa24.24■■□□□ 1.47
COMMD1-208ENST00000472729 ASTN2O75129 1339 aaPredicted RBP24.24■■□□□ 1.47
COMMD1-208ENST00000472729 PITPNM2Q9BZ72 1349 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms