RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CCDC158Q5M9N0 1113 aa20.68■□□□□ 0.9
CCM2-205ENST00000472223 GNL3LQ9NVN8 582 aaKnown RBP20.68■□□□□ 0.9
CCM2-205ENST00000472223 KDM2BQ8NHM5 1336 aa20.68■□□□□ 0.9
CCM2-205ENST00000472223 ZNF804AQ7Z570 1209 aa20.67■□□□□ 0.9
CCM2-205ENST00000472223 RTFDC1Q9BY42 306 aaPredicted RBP20.67■□□□□ 0.9
CCM2-205ENST00000472223 LNPKQ9C0E8 428 aa20.67■□□□□ 0.9
CCM2-205ENST00000472223 POLLQ9UGP5 575 aa20.67■□□□□ 0.9
CCM2-205ENST00000472223 FGFR2P21802 821 aa20.66■□□□□ 0.9
CCM2-205ENST00000472223 XAGE2Q96GT9 111 aa20.66■□□□□ 0.9
CCM2-205ENST00000472223 CCDC8Q9H0W5 538 aaPredicted RBP20.66■□□□□ 0.9
CCM2-205ENST00000472223 A0A1B0GUL6 1792 aa20.66■□□□□ 0.9
CCM2-205ENST00000472223 RIMBP2O15034 1052 aa20.65■□□□□ 0.9
CCM2-205ENST00000472223 FRAT2O75474 233 aaPredicted RBP20.65■□□□□ 0.9
CCM2-205ENST00000472223 EAF2Q96CJ1 260 aaPredicted RBP20.65■□□□□ 0.9
CCM2-205ENST00000472223 ZNF609O15014 1411 aa20.64■□□□□ 0.89
CCM2-205ENST00000472223 MED23Q9ULK4 1368 aa20.64■□□□□ 0.89
CCM2-205ENST00000472223 PPIP5K2O43314 1243 aa20.64■□□□□ 0.89
CCM2-205ENST00000472223 HIBADHP31937 336 aaKnown RBP20.64■□□□□ 0.89
CCM2-205ENST00000472223 TTC39AQ5SRH9 613 aa20.64■□□□□ 0.89
CCM2-205ENST00000472223 C15orf52Q6ZUT6 534 aaKnown RBP20.64■□□□□ 0.89
CCM2-205ENST00000472223 LTBP3Q9NS15 1303 aa20.63■□□□□ 0.89
CCM2-205ENST00000472223 SNAP23O00161 211 aa20.63■□□□□ 0.89
CCM2-205ENST00000472223 LARGE2Q8N3Y3 721 aa20.63■□□□□ 0.89
CCM2-205ENST00000472223 JDP2Q8WYK2 163 aa20.63■□□□□ 0.89
CCM2-205ENST00000472223 FER1L6Q2WGJ9 1857 aa20.62■□□□□ 0.89
CCM2-205ENST00000472223 UQCRFS1P1P0C7P4 283 aa20.62■□□□□ 0.89
CCM2-205ENST00000472223 YBX3P16989 372 aaKnown RBP eCLIP20.62■□□□□ 0.892e-6■■□□□ 12.1
CCM2-205ENST00000472223 IARSP41252 1262 aaKnown RBP20.62■□□□□ 0.89
CCM2-205ENST00000472223 DBNDD2Q9BQY9 259 aa20.62■□□□□ 0.89
CCM2-205ENST00000472223 COA1Q9GZY4 146 aa20.62■□□□□ 0.89
CCM2-205ENST00000472223 ZNF277Q9NRM2 450 aaPredicted RBP20.62■□□□□ 0.89
CCM2-205ENST00000472223 ERC2O15083 957 aa20.61■□□□□ 0.89
CCM2-205ENST00000472223 GYG1P46976 350 aa20.61■□□□□ 0.89
CCM2-205ENST00000472223 KIAA2012Q0VF49 1180 aa20.61■□□□□ 0.89
CCM2-205ENST00000472223 AOC3Q16853 763 aa20.61■□□□□ 0.89
CCM2-205ENST00000472223 SLC51AQ86UW1 340 aa20.61■□□□□ 0.89
CCM2-205ENST00000472223 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.61■□□□□ 0.89
CCM2-205ENST00000472223 MX1P20591 662 aa20.6■□□□□ 0.89
CCM2-205ENST00000472223 ADORA1P30542 326 aa20.6■□□□□ 0.89
CCM2-205ENST00000472223 CCDC102BQ68D86 513 aa20.6■□□□□ 0.89
CCM2-205ENST00000472223 NIM1KQ8IY84 436 aa20.6■□□□□ 0.89
CCM2-205ENST00000472223 FAM84BQ96KN1 310 aaPredicted RBP20.6■□□□□ 0.89
CCM2-205ENST00000472223 GPR101Q96P66 508 aaPredicted RBP20.6■□□□□ 0.89
CCM2-205ENST00000472223 ECHDC1Q9NTX5 307 aa20.6■□□□□ 0.89
CCM2-205ENST00000472223 DBNLQ9UJU6 430 aaKnown RBP20.6■□□□□ 0.89
CCM2-205ENST00000472223 LTBP1Q14766 1721 aa20.6■□□□□ 0.89
CCM2-205ENST00000472223 TTC41PQ6P2S7 1318 aa20.59■□□□□ 0.89
CCM2-205ENST00000472223 WTIPA6NIX2 430 aaPredicted RBP20.59■□□□□ 0.89
CCM2-205ENST00000472223 NFKBIEO00221 500 aa20.59■□□□□ 0.89
CCM2-205ENST00000472223 LMNB1P20700 586 aa20.59■□□□□ 0.89
CCM2-205ENST00000472223 BCAMP50895 628 aa20.59■□□□□ 0.89
CCM2-205ENST00000472223 PODNQ7Z5L7 613 aa20.59■□□□□ 0.89
CCM2-205ENST00000472223 C16orf71Q8IYS4 520 aaPredicted RBP20.59■□□□□ 0.89
CCM2-205ENST00000472223 ARAP2Q8WZ64 1704 aa20.58■□□□□ 0.89
CCM2-205ENST00000472223 SEMA3EO15041 775 aa20.58■□□□□ 0.89
CCM2-205ENST00000472223 RASSF7Q02833 373 aa20.58■□□□□ 0.89
CCM2-205ENST00000472223 DOK7Q18PE1 504 aa20.58■□□□□ 0.89
CCM2-205ENST00000472223 FBXO33Q7Z6M2 555 aa20.58■□□□□ 0.89
CCM2-205ENST00000472223 SNED1Q8TER0 1413 aa20.58■□□□□ 0.88
CCM2-205ENST00000472223 KLRK1P26718 216 aa20.57■□□□□ 0.88
CCM2-205ENST00000472223 SRCAPQ6ZRS2 3230 aa20.57■□□□□ 0.88
CCM2-205ENST00000472223 TXNRD3Q86VQ6 643 aa20.57■□□□□ 0.88
CCM2-205ENST00000472223 CD209Q9NNX6 404 aa20.57■□□□□ 0.88
CCM2-205ENST00000472223 DUOX1Q9NRD9 1551 aa20.57■□□□□ 0.88
CCM2-205ENST00000472223 TLR7Q9NYK1 1049 aaKnown RBP20.57■□□□□ 0.88
CCM2-205ENST00000472223 DENND2AQ9ULE3 1009 aa20.57■□□□□ 0.88
CCM2-205ENST00000472223 CHD4Q14839 1912 aa20.57■□□□□ 0.88
CCM2-205ENST00000472223 GLRX3O76003 335 aaKnown RBP20.56■□□□□ 0.88
CCM2-205ENST00000472223 PHKA1P46020 1223 aa20.56■□□□□ 0.88
CCM2-205ENST00000472223 ZNF512BQ96KM6 892 aaPredicted RBP20.56■□□□□ 0.88
CCM2-205ENST00000472223 DBNDD1Q9H9R9 158 aa20.56■□□□□ 0.88
CCM2-205ENST00000472223 ECE2O60344 883 aa20.55■□□□□ 0.88
CCM2-205ENST00000472223 IL1R1P14778 569 aa20.55■□□□□ 0.88
CCM2-205ENST00000472223 ATP5JP18859 108 aa20.55■□□□□ 0.88
CCM2-205ENST00000472223 FBXW7Q969H0 707 aa20.55■□□□□ 0.88
CCM2-205ENST00000472223 ZNRF3Q9ULT6 936 aa20.55■□□□□ 0.88
CCM2-205ENST00000472223 AOX1Q06278 1338 aa20.54■□□□□ 0.88
CCM2-205ENST00000472223 CCDC88AQ3V6T2 1871 aa20.54■□□□□ 0.88
CCM2-205ENST00000472223 ARID4AP29374 1257 aaPredicted RBP20.54■□□□□ 0.88
CCM2-205ENST00000472223 RGS3P49796 1198 aa20.54■□□□□ 0.88
CCM2-205ENST00000472223 PDE1AP54750 535 aa20.54■□□□□ 0.88
CCM2-205ENST00000472223 EIF6P56537 245 aaKnown RBP20.54■□□□□ 0.88
CCM2-205ENST00000472223 TDRD7Q8NHU6 1098 aaKnown RBP20.54■□□□□ 0.88
CCM2-205ENST00000472223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.54■□□□□ 0.88
CCM2-205ENST00000472223 STAP2Q9UGK3 403 aa20.54■□□□□ 0.88
CCM2-205ENST00000472223 IQSEC3Q9UPP2 1182 aaPredicted RBP20.54■□□□□ 0.88
CCM2-205ENST00000472223 IRS2Q9Y4H2 1338 aa20.53■□□□□ 0.88
CCM2-205ENST00000472223 PLEKHM2Q8IWE5 1019 aa20.53■□□□□ 0.88
CCM2-205ENST00000472223 RNF181Q9P0P0 153 aa20.53■□□□□ 0.88
CCM2-205ENST00000472223 MYH13Q9UKX3 1938 aa20.53■□□□□ 0.88
CCM2-205ENST00000472223 CHAF1AQ13111 956 aaPredicted RBP20.52■□□□□ 0.88
CCM2-205ENST00000472223 TNIP1Q15025 636 aa20.52■□□□□ 0.88
CCM2-205ENST00000472223 TTF1Q15361 905 aaPredicted RBP20.52■□□□□ 0.88
CCM2-205ENST00000472223 TTLL5Q6EMB2 1281 aa20.52■□□□□ 0.88
CCM2-205ENST00000472223 ZGPATQ8N5A5 531 aaKnown RBP20.52■□□□□ 0.88
CCM2-205ENST00000472223 SPATA5Q8NB90 893 aa20.52■□□□□ 0.88
CCM2-205ENST00000472223 WDR66Q8TBY9 1149 aa20.52■□□□□ 0.88
CCM2-205ENST00000472223 OTUD7AQ8TE49 926 aaPredicted RBP20.52■□□□□ 0.88
CCM2-205ENST00000472223 TBC1D22AQ8WUA7 517 aa20.52■□□□□ 0.88
CCM2-205ENST00000472223 BOLA2Q9H3K6 86 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms