RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 CCDC74AQ96AQ1 378 aa9.25□□□□□ -0.93
HDAC9-221ENST00000471887 POP1Q99575 1024 aaKnown RBP9.25□□□□□ -0.93
HDAC9-221ENST00000471887 LATS2Q9NRM7 1088 aa9.25□□□□□ -0.93
HDAC9-221ENST00000471887 PDE2AO00408 941 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-221ENST00000471887 TRPA1O75762 1119 aa9.24□□□□□ -0.93
HDAC9-221ENST00000471887 PTPRAP18433 802 aa9.24□□□□□ -0.93
HDAC9-221ENST00000471887 COL8A1P27658 744 aa9.24□□□□□ -0.93
HDAC9-221ENST00000471887 MAPK8P45983 427 aa9.24□□□□□ -0.93
HDAC9-221ENST00000471887 RASSF7Q02833 373 aa9.24□□□□□ -0.93
HDAC9-221ENST00000471887 FMR1Q06787 632 aaKnown RBP eCLIP9.24□□□□□ -0.93
HDAC9-221ENST00000471887 PRRT3Q5FWE3 981 aa9.24□□□□□ -0.93
HDAC9-221ENST00000471887 LACRTQ9GZZ8 138 aa9.24□□□□□ -0.93
HDAC9-221ENST00000471887 NPHS2Q9NP85 383 aa9.24□□□□□ -0.93
HDAC9-221ENST00000471887 PNMA6FA0A0J9YX94 578 aa9.23□□□□□ -0.93
HDAC9-221ENST00000471887 RAC1P63000 192 aa9.23□□□□□ -0.93
HDAC9-221ENST00000471887 TRIM28Q13263 835 aaKnown RBP9.23□□□□□ -0.93
HDAC9-221ENST00000471887 ENOX2Q16206 610 aaKnown RBP9.23□□□□□ -0.93
HDAC9-221ENST00000471887 ILDR2Q71H61 639 aa9.23□□□□□ -0.93
HDAC9-221ENST00000471887 HHIPQ96QV1 700 aa9.23□□□□□ -0.93
HDAC9-221ENST00000471887 MUC3BQ9H195 1237 aa9.23□□□□□ -0.93
HDAC9-221ENST00000471887 A0A0A0MRY4 1105 aa9.22□□□□□ -0.93
HDAC9-221ENST00000471887 ANKRD33BA6NCL7 494 aa9.22□□□□□ -0.93
HDAC9-221ENST00000471887 SPATA31C1P0DKV0 1188 aa9.22□□□□□ -0.93
HDAC9-221ENST00000471887 CDC27P30260 824 aa9.22□□□□□ -0.93
HDAC9-221ENST00000471887 BAG6P46379 1132 aa9.22□□□□□ -0.93
HDAC9-221ENST00000471887 GSK3AP49840 483 aa9.22□□□□□ -0.93
HDAC9-221ENST00000471887 DTWD1Q8N5C7 304 aa9.22□□□□□ -0.93
HDAC9-221ENST00000471887 NXPE3Q969Y0 559 aa9.22□□□□□ -0.93
HDAC9-221ENST00000471887 PPME1Q9Y570 386 aa9.22□□□□□ -0.93
HDAC9-221ENST00000471887 A0A1W2PP55 124 aa9.21□□□□□ -0.94
HDAC9-221ENST00000471887 TMCO4Q5TGY1 634 aa9.21□□□□□ -0.94
HDAC9-221ENST00000471887 KIAA0319Q5VV43 1072 aa9.21□□□□□ -0.94
HDAC9-221ENST00000471887 DNAJC14Q6Y2X3 702 aaPredicted RBP9.21□□□□□ -0.94
HDAC9-221ENST00000471887 BHLHE41Q9C0J9 482 aaPredicted RBP9.21□□□□□ -0.94
HDAC9-221ENST00000471887 ADAM19Q9H013 955 aa9.21□□□□□ -0.94
HDAC9-221ENST00000471887 NLRP2Q9NX02 1062 aa9.21□□□□□ -0.94
HDAC9-221ENST00000471887 GDF11O95390 407 aa9.2□□□□□ -0.94
HDAC9-221ENST00000471887 ATP2B2Q01814 1243 aa9.2□□□□□ -0.94
HDAC9-221ENST00000471887 FMR1NBQ8N0W7 255 aaPredicted RBP9.2□□□□□ -0.94
HDAC9-221ENST00000471887 DCAF5Q96JK2 942 aa9.2□□□□□ -0.94
HDAC9-221ENST00000471887 EHD4Q9H223 541 aa9.2□□□□□ -0.94
HDAC9-221ENST00000471887 LIN7BQ9HAP6 207 aa9.2□□□□□ -0.94
HDAC9-221ENST00000471887 FAM229AH3BQW9 127 aa9.19□□□□□ -0.94
HDAC9-221ENST00000471887 GADD45BO75293 160 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-221ENST00000471887 P4HBP07237 508 aaKnown RBP9.19□□□□□ -0.94
HDAC9-221ENST00000471887 ERCC3P19447 782 aa9.19□□□□□ -0.94
HDAC9-221ENST00000471887 CABP4P57796 275 aa9.19□□□□□ -0.94
HDAC9-221ENST00000471887 TRIM26Q12899 539 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-221ENST00000471887 COL19A1Q14993 1142 aa9.19□□□□□ -0.94
HDAC9-221ENST00000471887 ADAMTSL4Q6UY14 1074 aa9.19□□□□□ -0.94
HDAC9-221ENST00000471887 CCNJLQ8IV13 435 aa9.19□□□□□ -0.94
HDAC9-221ENST00000471887 MAP4K3Q8IVH8 894 aa9.19□□□□□ -0.94
HDAC9-221ENST00000471887 TMEM151AQ8N4L1 468 aa9.19□□□□□ -0.94
HDAC9-221ENST00000471887 ASAP3Q8TDY4 903 aa9.19□□□□□ -0.94
HDAC9-221ENST00000471887 FBF1Q8TES7 1133 aa9.19□□□□□ -0.94
HDAC9-221ENST00000471887 BSNDQ8WZ55 320 aa9.19□□□□□ -0.94
HDAC9-221ENST00000471887 SRA1Q9HD15 236 aaKnown RBP9.19□□□□□ -0.94
HDAC9-221ENST00000471887 SH2B1Q9NRF2 756 aaPredicted RBP9.19□□□□□ -0.94
HDAC9-221ENST00000471887 ELNP15502 786 aa9.18□□□□□ -0.94
HDAC9-221ENST00000471887 ALG1LQ6GMV1 187 aa9.18□□□□□ -0.94
HDAC9-221ENST00000471887 FAM117BQ6P1L5 589 aa9.18□□□□□ -0.94
HDAC9-221ENST00000471887 EPS8L3Q8TE67 593 aaKnown RBP9.18□□□□□ -0.94
HDAC9-221ENST00000471887 LINC01387J3KSC0 135 aa9.17□□□□□ -0.94
HDAC9-221ENST00000471887 EPHA1P21709 976 aa9.17□□□□□ -0.94
HDAC9-221ENST00000471887 FBXO11Q86XK2 927 aa9.17□□□□□ -0.94
HDAC9-221ENST00000471887 DCAF11Q8TEB1 546 aa9.17□□□□□ -0.94
HDAC9-221ENST00000471887 TCF12Q99081 682 aa9.17□□□□□ -0.94
HDAC9-221ENST00000471887 SOX13Q9UN79 622 aa9.17□□□□□ -0.94
HDAC9-221ENST00000471887 TRAK1Q9UPV9 953 aa9.17□□□□□ -0.94
HDAC9-221ENST00000471887 H3BRJ5 948 aa9.16□□□□□ -0.94
HDAC9-221ENST00000471887 CDC25BP30305 580 aa9.16□□□□□ -0.94
HDAC9-221ENST00000471887 FGD1P98174 961 aa9.16□□□□□ -0.94
HDAC9-221ENST00000471887 EAPPQ56P03 285 aaPredicted RBP9.16□□□□□ -0.94
HDAC9-221ENST00000471887 TXNDC11Q6PKC3 985 aa9.16□□□□□ -0.94
HDAC9-221ENST00000471887 NPAS4Q8IUM7 802 aa9.16□□□□□ -0.94
HDAC9-221ENST00000471887 NACC1Q96RE7 527 aa9.16□□□□□ -0.94
HDAC9-221ENST00000471887 A0A096LPE4 126 aa9.15□□□□□ -0.94
HDAC9-221ENST00000471887 A0A1W2PPZ6 126 aa9.15□□□□□ -0.94
HDAC9-221ENST00000471887 KRBA1A5PL33 1030 aa9.15□□□□□ -0.94
HDAC9-221ENST00000471887 METTL12A8MUP2 240 aa9.15□□□□□ -0.94
HDAC9-221ENST00000471887 DEAF1O75398 565 aaPredicted RBP9.15□□□□□ -0.94
HDAC9-221ENST00000471887 APBA3O96018 575 aa9.15□□□□□ -0.94
HDAC9-221ENST00000471887 LDHBP07195 334 aaKnown RBP9.15□□□□□ -0.94
HDAC9-221ENST00000471887 GRM2Q14416 872 aa9.15□□□□□ -0.94
HDAC9-221ENST00000471887 SETDB1Q15047 1291 aa9.15□□□□□ -0.94
HDAC9-221ENST00000471887 GRIK4Q16099 956 aa9.15□□□□□ -0.94
HDAC9-221ENST00000471887 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.15□□□□□ -0.94
HDAC9-221ENST00000471887 PI16Q6UXB8 463 aa9.15□□□□□ -0.94
HDAC9-221ENST00000471887 PPP4R2Q9NY27 417 aa9.15□□□□□ -0.94
HDAC9-221ENST00000471887 GRIA4P48058 902 aa9.14□□□□□ -0.95
HDAC9-221ENST00000471887 PRPF40BQ6NWY9 871 aaKnown RBP9.14□□□□□ -0.95
HDAC9-221ENST00000471887 WNT8BQ93098 351 aa9.14□□□□□ -0.95
HDAC9-221ENST00000471887 WWC3Q9ULE0 1092 aa9.14□□□□□ -0.95
HDAC9-221ENST00000471887 FSCN2O14926 492 aa9.13□□□□□ -0.95
HDAC9-221ENST00000471887 PIP4K2BP78356 416 aa9.13□□□□□ -0.95
HDAC9-221ENST00000471887 IKBKEQ14164 716 aa9.13□□□□□ -0.95
HDAC9-221ENST00000471887 VN1R5Q7Z5H4 357 aa9.13□□□□□ -0.95
HDAC9-221ENST00000471887 KLHL23Q8NBE8 558 aa9.13□□□□□ -0.95
HDAC9-221ENST00000471887 SETDB2Q96T68 719 aa9.13□□□□□ -0.95
HDAC9-221ENST00000471887 PRPF40AO75400 957 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms