RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 EYA3Q99504 573 aa10.35□□□□□ -0.75
USP48-207ENST00000471752 PCDHAC2Q9Y5I4 1007 aa10.35□□□□□ -0.75
USP48-207ENST00000471752 XDHP47989 1333 aa10.34□□□□□ -0.75
USP48-207ENST00000471752 AOX1Q06278 1338 aa10.34□□□□□ -0.75
USP48-207ENST00000471752 ZEB1P37275 1124 aaPredicted RBP10.34□□□□□ -0.75
USP48-207ENST00000471752 CTCFP49711 727 aaPredicted RBP10.34□□□□□ -0.75
USP48-207ENST00000471752 ZNF280AP59817 542 aaPredicted RBP10.34□□□□□ -0.75
USP48-207ENST00000471752 NEXNQ0ZGT2 675 aa10.34□□□□□ -0.75
USP48-207ENST00000471752 DACT2Q5SW24 774 aa10.34□□□□□ -0.75
USP48-207ENST00000471752 KAZALD1Q96I82 304 aa10.34□□□□□ -0.75
USP48-207ENST00000471752 PLA2G12BQ9BX93 195 aa10.34□□□□□ -0.75
USP48-207ENST00000471752 ZNF521Q96K83 1311 aa10.33□□□□□ -0.76
USP48-207ENST00000471752 IRS2Q9Y4H2 1338 aa10.33□□□□□ -0.76
USP48-207ENST00000471752 FAM155AB1AL88 458 aaPredicted RBP10.33□□□□□ -0.76
USP48-207ENST00000471752 ATP2B4P23634 1241 aa10.33□□□□□ -0.76
USP48-207ENST00000471752 HUNKP57058 714 aa10.33□□□□□ -0.76
USP48-207ENST00000471752 KIF4BQ2VIQ3 1234 aa10.33□□□□□ -0.76
USP48-207ENST00000471752 ANGEL2Q5VTE6 544 aaKnown RBP10.33□□□□□ -0.76
USP48-207ENST00000471752 LINS1Q8NG48 757 aa10.33□□□□□ -0.76
USP48-207ENST00000471752 CDCA7LQ96GN5 454 aa10.33□□□□□ -0.76
USP48-207ENST00000471752 PUS3Q9BZE2 481 aaKnown RBP10.33□□□□□ -0.76
USP48-207ENST00000471752 GGA3Q9NZ52 723 aa10.33□□□□□ -0.76
USP48-207ENST00000471752 FZD1Q9UP38 647 aa10.33□□□□□ -0.76
USP48-207ENST00000471752 JAG2Q9Y219 1238 aa10.33□□□□□ -0.76
USP48-207ENST00000471752 POLR2AP24928 1970 aaKnown RBP10.32□□□□□ -0.76
USP48-207ENST00000471752 USP17L3A6NCW0 530 aa10.32□□□□□ -0.76
USP48-207ENST00000471752 USP17L4A6NCW7 530 aa10.32□□□□□ -0.76
USP48-207ENST00000471752 G3V3G9 751 aa10.32□□□□□ -0.76
USP48-207ENST00000471752 RPS12P25398 132 aaKnown RBP10.32□□□□□ -0.76
USP48-207ENST00000471752 CHRNDQ07001 517 aa10.32□□□□□ -0.76
USP48-207ENST00000471752 DCAF8Q5TAQ9 597 aa10.32□□□□□ -0.76
USP48-207ENST00000471752 LMBR1LQ6UX01 489 aa10.32□□□□□ -0.76
USP48-207ENST00000471752 USP17L1Q7RTZ2 530 aa10.32□□□□□ -0.76
USP48-207ENST00000471752 CERS5Q8N5B7 392 aa10.32□□□□□ -0.76
USP48-207ENST00000471752 FBXW7Q969H0 707 aa10.32□□□□□ -0.76
USP48-207ENST00000471752 CDCA5Q96FF9 252 aa10.32□□□□□ -0.76
USP48-207ENST00000471752 CDC5LQ99459 802 aaKnown RBP10.32□□□□□ -0.76
USP48-207ENST00000471752 MYOZ2Q9NPC6 264 aa10.32□□□□□ -0.76
USP48-207ENST00000471752 PRDM10Q9NQV6 1147 aa10.32□□□□□ -0.76
USP48-207ENST00000471752 PLIN1O60240 522 aa10.31□□□□□ -0.76
USP48-207ENST00000471752 USP17L8P0C7I0 530 aa10.31□□□□□ -0.76
USP48-207ENST00000471752 PODNQ7Z5L7 613 aa10.31□□□□□ -0.76
USP48-207ENST00000471752 MRPL50Q8N5N7 158 aaKnown RBP10.31□□□□□ -0.76
USP48-207ENST00000471752 AGBL3Q8NEM8 1001 aa10.31□□□□□ -0.76
USP48-207ENST00000471752 AIDAQ96BJ3 306 aa10.31□□□□□ -0.76
USP48-207ENST00000471752 DCPSQ96C86 337 aaKnown RBP10.31□□□□□ -0.76
USP48-207ENST00000471752 SUCLG2Q96I99 432 aa10.31□□□□□ -0.76
USP48-207ENST00000471752 GBA2Q9HCG7 927 aaPredicted RBP10.31□□□□□ -0.76
USP48-207ENST00000471752 ZNF804BA4D1E1 1349 aa10.31□□□□□ -0.76
USP48-207ENST00000471752 UBE2Q2LH0YL09 131 aa10.3□□□□□ -0.76
USP48-207ENST00000471752 SASH1O94885 1247 aa10.3□□□□□ -0.76
USP48-207ENST00000471752 NBPF7P0C2Y1 421 aaPredicted RBP10.3□□□□□ -0.76
USP48-207ENST00000471752 HSP90B1P14625 803 aaKnown RBP10.3□□□□□ -0.76
USP48-207ENST00000471752 IGHMBP2P38935 993 aaKnown RBP10.3□□□□□ -0.76
USP48-207ENST00000471752 GTF2IP78347 998 aa10.3□□□□□ -0.76
USP48-207ENST00000471752 KIF23Q02241 960 aaPredicted RBP10.3□□□□□ -0.76
USP48-207ENST00000471752 MAP2K1Q02750 393 aaPredicted RBP10.3□□□□□ -0.76
USP48-207ENST00000471752 SLC4A10Q6U841 1118 aa10.3□□□□□ -0.76
USP48-207ENST00000471752 CHMP3Q9Y3E7 222 aa10.3□□□□□ -0.76
USP48-207ENST00000471752 MED23Q9ULK4 1368 aa10.29□□□□□ -0.76
USP48-207ENST00000471752 WNT10BO00744 389 aa10.29□□□□□ -0.76
USP48-207ENST00000471752 MAP2K2P36507 400 aa10.29□□□□□ -0.76
USP48-207ENST00000471752 ECE1P42892 770 aa10.29□□□□□ -0.76
USP48-207ENST00000471752 GRIK5Q16478 980 aa10.29□□□□□ -0.76
USP48-207ENST00000471752 TTLL5Q6EMB2 1281 aa10.29□□□□□ -0.76
USP48-207ENST00000471752 RGMBQ6NW40 437 aa10.29□□□□□ -0.76
USP48-207ENST00000471752 KIAA0825Q8IV33 1275 aa10.29□□□□□ -0.76
USP48-207ENST00000471752 SSH1Q8WYL5 1049 aa10.29□□□□□ -0.76
USP48-207ENST00000471752 CD209Q9NNX6 404 aa10.29□□□□□ -0.76
USP48-207ENST00000471752 LEMD3Q9Y2U8 911 aa10.29□□□□□ -0.76
USP48-207ENST00000471752 ANKRD18BA2A2Z9 1011 aa10.28□□□□□ -0.76
USP48-207ENST00000471752 GRM8O00222 908 aa10.28□□□□□ -0.76
USP48-207ENST00000471752 ZNF157P51786 506 aaPredicted RBP10.28□□□□□ -0.76
USP48-207ENST00000471752 PRKG1Q13976 671 aa10.28□□□□□ -0.76
USP48-207ENST00000471752 ANKRD44Q8N8A2 993 aa10.28□□□□□ -0.76
USP48-207ENST00000471752 KLHDC4Q8TBB5 520 aa10.28□□□□□ -0.76
USP48-207ENST00000471752 ZBED3Q96IU2 234 aaPredicted RBP10.28□□□□□ -0.76
USP48-207ENST00000471752 CSRNP1Q96S65 589 aa10.28□□□□□ -0.76
USP48-207ENST00000471752 MPHOSPH8Q99549 860 aa10.28□□□□□ -0.76
USP48-207ENST00000471752 CHMP4AQ9BY43 222 aa10.28□□□□□ -0.76
USP48-207ENST00000471752 COA1Q9GZY4 146 aa10.28□□□□□ -0.76
USP48-207ENST00000471752 MYH16Q9H6N6 1097 aa10.28□□□□□ -0.76
USP48-207ENST00000471752 F8W031 263 aaPredicted RBP10.27□□□□□ -0.77
USP48-207ENST00000471752 SLFN5Q08AF3 891 aa10.27□□□□□ -0.77
USP48-207ENST00000471752 IFIT5Q13325 482 aaKnown RBP10.27□□□□□ -0.77
USP48-207ENST00000471752 LRRC24Q50LG9 513 aa10.27□□□□□ -0.77
USP48-207ENST00000471752 STRIP1Q5VSL9 837 aa10.27□□□□□ -0.77
USP48-207ENST00000471752 SULF1Q8IWU6 871 aa10.27□□□□□ -0.77
USP48-207ENST00000471752 C2orf69Q8N8R5 385 aa10.27□□□□□ -0.77
USP48-207ENST00000471752 ABHD8Q96I13 439 aa10.27□□□□□ -0.77
USP48-207ENST00000471752 HHIPL1Q96JK4 782 aa10.27□□□□□ -0.77
USP48-207ENST00000471752 ANKRD2Q9GZV1 360 aa10.27□□□□□ -0.77
USP48-207ENST00000471752 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.27□□□□□ -0.77
USP48-207ENST00000471752 TRPM7Q96QT4 1865 aa10.27□□□□□ -0.77
USP48-207ENST00000471752 SPEF2Q9C093 1822 aa10.26□□□□□ -0.77
USP48-207ENST00000471752 TNRC18O15417 2968 aaPredicted RBP10.26□□□□□ -0.77
USP48-207ENST00000471752 TRPA1O75762 1119 aa10.26□□□□□ -0.77
USP48-207ENST00000471752 GYG1P46976 350 aa10.26□□□□□ -0.77
USP48-207ENST00000471752 MKRN3Q13064 507 aaKnown RBP10.26□□□□□ -0.77
USP48-207ENST00000471752 SRCIN1Q9C0H9 1055 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms