RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 MYO3BQ8WXR4 1341 aa17.06■□□□□ 0.32
HMGN1-211ENST00000471260 MAP2K1Q02750 393 aaPredicted RBP17.06■□□□□ 0.32
HMGN1-211ENST00000471260 CHRNDQ07001 517 aa17.06■□□□□ 0.32
HMGN1-211ENST00000471260 STRIP1Q5VSL9 837 aa17.06■□□□□ 0.32
HMGN1-211ENST00000471260 LMBR1LQ6UX01 489 aa17.06■□□□□ 0.32
HMGN1-211ENST00000471260 UTYO14607 1347 aa17.05■□□□□ 0.32
HMGN1-211ENST00000471260 WTIPA6NIX2 430 aaPredicted RBP17.05■□□□□ 0.32
HMGN1-211ENST00000471260 EGFRP00533 1210 aa17.05■□□□□ 0.32
HMGN1-211ENST00000471260 CT47B1P0C2W7 299 aaPredicted RBP17.05■□□□□ 0.32
HMGN1-211ENST00000471260 USP17L8P0C7I0 530 aa17.05■□□□□ 0.32
HMGN1-211ENST00000471260 ALDH1L2Q3SY69 923 aa17.05■□□□□ 0.32
HMGN1-211ENST00000471260 RBM26Q5T8P6 1007 aaKnown RBP17.05■□□□□ 0.32
HMGN1-211ENST00000471260 COL13A1Q5TAT6 717 aaPredicted RBP17.05■□□□□ 0.32
HMGN1-211ENST00000471260 C15orf52Q6ZUT6 534 aaKnown RBP17.05■□□□□ 0.32
HMGN1-211ENST00000471260 KRT26Q7Z3Y9 468 aa17.05■□□□□ 0.32
HMGN1-211ENST00000471260 USP48Q86UV5 1035 aa17.05■□□□□ 0.32
HMGN1-211ENST00000471260 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
HMGN1-211ENST00000471260 WBP1LQ9NX94 342 aa17.05■□□□□ 0.32
HMGN1-211ENST00000471260 CHMP3Q9Y3E7 222 aa17.05■□□□□ 0.32
HMGN1-211ENST00000471260 SPEF2Q9C093 1822 aa17.05■□□□□ 0.32
HMGN1-211ENST00000471260 KCNJ4P48050 445 aa17.04■□□□□ 0.32
HMGN1-211ENST00000471260 TRMT2AQ8IZ69 625 aaKnown RBP17.04■□□□□ 0.32
HMGN1-211ENST00000471260 CAPNS2Q96L46 248 aa17.04■□□□□ 0.32
HMGN1-211ENST00000471260 MAP2K2P36507 400 aa17.03■□□□□ 0.32
HMGN1-211ENST00000471260 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
HMGN1-211ENST00000471260 EPHA10Q5JZY3 1008 aa17.03■□□□□ 0.32
HMGN1-211ENST00000471260 DACT2Q5SW24 774 aa17.03■□□□□ 0.32
HMGN1-211ENST00000471260 LDHAL6AQ6ZMR3 332 aa17.03■□□□□ 0.32
HMGN1-211ENST00000471260 TXNRD3Q86VQ6 643 aa17.03■□□□□ 0.32
HMGN1-211ENST00000471260 SULF1Q8IWU6 871 aa17.03■□□□□ 0.32
HMGN1-211ENST00000471260 OGFOD1Q8N543 542 aa17.03■□□□□ 0.32
HMGN1-211ENST00000471260 SSH1Q8WYL5 1049 aa17.03■□□□□ 0.32
HMGN1-211ENST00000471260 MYOZ2Q9NPC6 264 aa17.03■□□□□ 0.32
HMGN1-211ENST00000471260 PITPNM2Q9BZ72 1349 aa17.02■□□□□ 0.32
HMGN1-211ENST00000471260 CTCFP49711 727 aaPredicted RBP17.02■□□□□ 0.32
HMGN1-211ENST00000471260 TTLL5Q6EMB2 1281 aa17.02■□□□□ 0.32
HMGN1-211ENST00000471260 PAXIP1Q6ZW49 1069 aaPredicted RBP17.02■□□□□ 0.32
HMGN1-211ENST00000471260 ZNF408Q9H9D4 720 aa17.02■□□□□ 0.32
HMGN1-211ENST00000471260 PRDM10Q9NQV6 1147 aa17.02■□□□□ 0.32
HMGN1-211ENST00000471260 FOXN1O15353 648 aa17.01■□□□□ 0.31
HMGN1-211ENST00000471260 NBPF7P0C2Y1 421 aaPredicted RBP17.01■□□□□ 0.31
HMGN1-211ENST00000471260 SCARF1Q14162 830 aa17.01■□□□□ 0.31
HMGN1-211ENST00000471260 CYP4F22Q6NT55 531 aa17.01■□□□□ 0.31
HMGN1-211ENST00000471260 CDCA7LQ96GN5 454 aa17.01■□□□□ 0.31
HMGN1-211ENST00000471260 CD209Q9NNX6 404 aa17.01■□□□□ 0.31
HMGN1-211ENST00000471260 CNNM1Q9NRU3 951 aa17.01■□□□□ 0.31
HMGN1-211ENST00000471260 GGA3Q9NZ52 723 aa17.01■□□□□ 0.31
HMGN1-211ENST00000471260 POLR2AP24928 1970 aaKnown RBP17■□□□□ 0.31
HMGN1-211ENST00000471260 IRS2Q9Y4H2 1338 aa17■□□□□ 0.31
HMGN1-211ENST00000471260 RABL6Q3YEC7 729 aaPredicted RBP17■□□□□ 0.31
HMGN1-211ENST00000471260 KAZALD1Q96I82 304 aa17■□□□□ 0.31
HMGN1-211ENST00000471260 SUCLG2Q96I99 432 aa17■□□□□ 0.31
HMGN1-211ENST00000471260 TAF5LO75529 589 aa16.99■□□□□ 0.31
HMGN1-211ENST00000471260 KLRK1P26718 216 aa16.99■□□□□ 0.31
HMGN1-211ENST00000471260 BRPF1P55201 1214 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-211ENST00000471260 ZNF804AQ7Z570 1209 aa16.99■□□□□ 0.31
HMGN1-211ENST00000471260 C2orf69Q8N8R5 385 aa16.99■□□□□ 0.31
HMGN1-211ENST00000471260 FBXW7Q969H0 707 aa16.99■□□□□ 0.31
HMGN1-211ENST00000471260 BEGAINQ9BUH8 593 aa16.99■□□□□ 0.31
HMGN1-211ENST00000471260 GBA2Q9HCG7 927 aaPredicted RBP16.99■□□□□ 0.31
HMGN1-211ENST00000471260 HDAC9Q9UKV0 1011 aa16.99■□□□□ 0.31
HMGN1-211ENST00000471260 THSD7BQ9C0I4 1608 aa16.99■□□□□ 0.31
HMGN1-211ENST00000471260 ADM5C9JUS6 153 aa16.98■□□□□ 0.31
HMGN1-211ENST00000471260 IL1R1P14778 569 aa16.98■□□□□ 0.31
HMGN1-211ENST00000471260 GTF2IP78347 998 aa16.98■□□□□ 0.31
HMGN1-211ENST00000471260 ANGEL2Q5VTE6 544 aaKnown RBP16.98■□□□□ 0.31
HMGN1-211ENST00000471260 TNS4Q8IZW8 715 aa16.98■□□□□ 0.31
HMGN1-211ENST00000471260 HELBQ8NG08 1087 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-211ENST00000471260 ZNF594Q96JF6 807 aaPredicted RBP16.98■□□□□ 0.31
HMGN1-211ENST00000471260 SMC4Q9NTJ3 1288 aa16.98■□□□□ 0.31
HMGN1-211ENST00000471260 HUNKP57058 714 aa16.97■□□□□ 0.31
HMGN1-211ENST00000471260 FKBP1AP62942 108 aaKnown RBP16.97■□□□□ 0.31
HMGN1-211ENST00000471260 FKBP1BP68106 108 aa16.97■□□□□ 0.31
HMGN1-211ENST00000471260 UBE4AQ14139 1066 aa16.97■□□□□ 0.31
HMGN1-211ENST00000471260 BICC1Q9H694 974 aaKnown RBP16.97■□□□□ 0.31
HMGN1-211ENST00000471260 MROH5Q6ZUA9 1318 aa16.96■□□□□ 0.31
HMGN1-211ENST00000471260 SNAP23O00161 211 aa16.96■□□□□ 0.31
HMGN1-211ENST00000471260 WNT10BO00744 389 aa16.96■□□□□ 0.31
HMGN1-211ENST00000471260 CA12O43570 354 aa16.96■□□□□ 0.31
HMGN1-211ENST00000471260 NOGQ13253 232 aa16.96■□□□□ 0.31
HMGN1-211ENST00000471260 GRM1Q13255 1194 aa16.96■□□□□ 0.31
HMGN1-211ENST00000471260 MXD3Q9BW11 206 aa16.96■□□□□ 0.31
HMGN1-211ENST00000471260 USP44Q9H0E7 712 aa16.96■□□□□ 0.31
HMGN1-211ENST00000471260 ASTN2O75129 1339 aaPredicted RBP16.96■□□□□ 0.3
HMGN1-211ENST00000471260 PLIN1O60240 522 aa16.95■□□□□ 0.3
HMGN1-211ENST00000471260 RGMBQ6NW40 437 aa16.95■□□□□ 0.3
HMGN1-211ENST00000471260 DLK2Q6UY11 383 aa16.95■□□□□ 0.3
HMGN1-211ENST00000471260 CCDC102AQ96A19 550 aa16.95■□□□□ 0.3
HMGN1-211ENST00000471260 CDCA5Q96FF9 252 aa16.95■□□□□ 0.3
HMGN1-211ENST00000471260 RIPOR2Q9Y4F9 1068 aa16.95■□□□□ 0.3
HMGN1-211ENST00000471260 ZNF646O15015 1829 aaPredicted RBP16.95■□□□□ 0.3
HMGN1-211ENST00000471260 SASH1O94885 1247 aa16.94■□□□□ 0.3
HMGN1-211ENST00000471260 NBPF9Q3BBW0 867 aa16.94■□□□□ 0.3
HMGN1-211ENST00000471260 KIAA0825Q8IV33 1275 aa16.94■□□□□ 0.3
HMGN1-211ENST00000471260 ANKRD44Q8N8A2 993 aa16.94■□□□□ 0.3
HMGN1-211ENST00000471260 MTMR14Q8NCE2 650 aa16.94■□□□□ 0.3
HMGN1-211ENST00000471260 HDAC5Q9UQL6 1122 aa16.94■□□□□ 0.3
HMGN1-211ENST00000471260 A0A1B0GUL6 1792 aa16.94■□□□□ 0.3
HMGN1-211ENST00000471260 AOC2O75106 756 aa16.93■□□□□ 0.3
HMGN1-211ENST00000471260 HSPA8P11142 646 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms