RNA–Protein interactions for RNA: ENST00000471030.1

LSMEM1-204, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 3

Gene LSMEM1, Length 483 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-204ENST00000471030 USB1Q9BQ65 265 aaKnown RBP7.57□□□□□ -1.2
LSMEM1-204ENST00000471030 METTL22Q9BUU2 404 aaPredicted RBP7.57□□□□□ -1.2
LSMEM1-204ENST00000471030 HMG20BQ9P0W2 317 aa7.57□□□□□ -1.2
LSMEM1-204ENST00000471030 LIMCH1Q9UPQ0 1083 aa7.57□□□□□ -1.2
LSMEM1-204ENST00000471030 TMEM94Q12767 1356 aa7.57□□□□□ -1.2
LSMEM1-204ENST00000471030 KDM3BQ7LBC6 1761 aa7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 CD2BP2O95400 341 aaKnown RBP7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 XRCC6P12956 609 aaKnown RBP eCLIP7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 PDCP20941 246 aa7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 SSFA2P28290 1259 aa7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 CABP4P57796 275 aa7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 CCDC173Q0VFZ6 552 aa7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 HS1BP3Q53T59 392 aa7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 VPS53Q5VIR6 699 aa7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 THAP11Q96EK4 314 aa7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 TEX13AQ9BXU3 409 aaPredicted RBP7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 IL1RAPL2Q9NP60 686 aa7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 SNRKQ9NRH2 765 aa7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 V9GY48 417 aaPredicted RBP7.56□□□□□ -1.2
LSMEM1-204ENST00000471030 SPATA31A3Q5VYP0 1347 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 PCDH11XQ9BZA7 1347 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 PCDH11YQ9BZA8 1340 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 ADAMTS7Q9UKP4 1686 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 C6orf229H3BNL8 230 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 BRD1O95696 1058 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 S1PR4O95977 384 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 GCKRQ14397 625 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 RETREG3Q86VR2 466 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 PLBD2Q8NHP8 589 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 KCNB2Q92953 911 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 GZF1Q9H116 711 aaPredicted RBP7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 ALDH8A1Q9H2A2 487 aaPredicted RBP7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 KDM4CQ9H3R0 1056 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 COPRSQ9NQ92 184 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 ATG3Q9NT62 314 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 BRPF3Q9ULD4 1205 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 CYP46A1Q9Y6A2 500 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 TRPM3Q9HCF6 1732 aaPredicted RBP7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 MRC1P22897 1456 aa7.55□□□□□ -1.2
LSMEM1-204ENST00000471030 NEURL1BA8MQ27 555 aa7.54□□□□□ -1.2
LSMEM1-204ENST00000471030 KCNQ3O43525 872 aa7.54□□□□□ -1.2
LSMEM1-204ENST00000471030 HMGB1P09429 215 aaKnown RBP7.54□□□□□ -1.2
LSMEM1-204ENST00000471030 ZC3H6P61129 1189 aaKnown RBP7.54□□□□□ -1.2
LSMEM1-204ENST00000471030 RABL6Q3YEC7 729 aaPredicted RBP7.54□□□□□ -1.2
LSMEM1-204ENST00000471030 MCTP1Q6DN14 999 aa7.54□□□□□ -1.2
LSMEM1-204ENST00000471030 AACSQ86V21 672 aa7.54□□□□□ -1.2
LSMEM1-204ENST00000471030 FAM184AQ8NB25 1140 aa7.54□□□□□ -1.2
LSMEM1-204ENST00000471030 LSG1Q9H089 658 aaKnown RBP7.54□□□□□ -1.2
LSMEM1-204ENST00000471030 GPR108Q9NPR9 543 aa7.54□□□□□ -1.2
LSMEM1-204ENST00000471030 RNF223E7ERA6 249 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 ATP5JP18859 108 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 KCNJ4P48050 445 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 NASPP49321 788 aaPredicted RBP7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 XPCQ01831 940 aaPredicted RBP7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 MTMR2Q13614 643 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 TSGA10IPQ3SY00 556 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 COPS6Q7L5N1 327 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 TMEM87AQ8NBN3 555 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 NFATC2IPQ8NCF5 419 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 XAGE3Q8WTP9 111 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 BICC1Q9H694 974 aaKnown RBP7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 LMBRD1Q9NUN5 540 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 SMC3Q9UQE7 1217 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 KIF3AQ9Y496 699 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 PXDNQ92626 1479 aa7.53□□□□□ -1.2
LSMEM1-204ENST00000471030 WDR17Q8IZU2 1322 aa7.52□□□□□ -1.2
LSMEM1-204ENST00000471030 ALS2Q96Q42 1657 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 MOXD2PA6NHM9 499 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 MCM5P33992 734 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 TUSC1Q2TAM9 212 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 PRPF38BQ5VTL8 546 aaKnown RBP7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 RSBN1LQ6PCB5 846 aaPredicted RBP7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 CWC27Q6UX04 472 aaKnown RBP7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 RNF19BQ6ZMZ0 732 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 CCDC191Q8NCU4 936 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 ZCRB1Q8TBF4 217 aaKnown RBP7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 MAP4K1Q92918 833 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 SUCLG2Q96I99 432 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 FSD1Q9BTV5 496 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 CARD10Q9BWT7 1032 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 PRKD2Q9BZL6 878 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 ZBTB3Q9H5J0 574 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 PRDM11Q9NQV5 511 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 PDRG1Q9NUG6 133 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 SNX14Q9Y5W7 946 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 KDM6AO15550 1401 aaPredicted RBP7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 CCDC171Q6TFL3 1326 aa7.52□□□□□ -1.21
LSMEM1-204ENST00000471030 SPTLC1O15269 473 aa7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 ZBTB24O43167 697 aaPredicted RBP7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 PRPF40AO75400 957 aaKnown RBP7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 CIAO1O76071 339 aa7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 IGKV5-2P06315 115 aa7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 IL15P40933 162 aaPredicted RBP7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 AIMP1Q12904 312 aaKnown RBP7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 PROSER3Q2NL68 480 aa7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 CWF19L2Q2TBE0 894 aaKnown RBP7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 ZSCAN23Q3MJ62 389 aa7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 TSHZ3Q63HK5 1081 aa7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 RUFY3Q7L099 469 aa7.51□□□□□ -1.21
LSMEM1-204ENST00000471030 UNC5CLQ8IV45 518 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms