RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 GNL2Q13823 731 aaKnown RBP6.39□□□□□ -1.39
PRPF3-204ENST00000470824 SF3A1Q15459 793 aaKnown RBP6.39□□□□□ -1.39
PRPF3-204ENST00000470824 ZNF468Q5VIY5 522 aaPredicted RBP6.39□□□□□ -1.39
PRPF3-204ENST00000470824 USP48Q86UV5 1035 aa6.39□□□□□ -1.39
PRPF3-204ENST00000470824 DRC1Q96MC2 740 aa6.39□□□□□ -1.39
PRPF3-204ENST00000470824 CNTNAP3BQ96NU0 1288 aa6.39□□□□□ -1.39
PRPF3-204ENST00000470824 NOC4LQ9BVI4 516 aaKnown RBP6.39□□□□□ -1.39
PRPF3-204ENST00000470824 CNTNAP3Q9BZ76 1288 aa6.39□□□□□ -1.39
PRPF3-204ENST00000470824 UBE2OQ9C0C9 1292 aaKnown RBP6.39□□□□□ -1.39
PRPF3-204ENST00000470824 ABCB6Q9NP58 842 aa6.39□□□□□ -1.39
PRPF3-204ENST00000470824 AVENQ9NQS1 362 aaPredicted RBP6.39□□□□□ -1.39
PRPF3-204ENST00000470824 DNAJB12Q9NXW2 375 aaKnown RBP6.39□□□□□ -1.39
PRPF3-204ENST00000470824 DDX41Q9UJV9 622 aaKnown RBP6.39□□□□□ -1.39
PRPF3-204ENST00000470824 C2CD2LO14523 706 aa6.38□□□□□ -1.39
PRPF3-204ENST00000470824 TRPA1O75762 1119 aa6.38□□□□□ -1.39
PRPF3-204ENST00000470824 MX2P20592 715 aa6.38□□□□□ -1.39
PRPF3-204ENST00000470824 MLLT1Q03111 559 aaPredicted RBP6.38□□□□□ -1.39
PRPF3-204ENST00000470824 TBC1D8BQ0IIM8 1120 aa6.38□□□□□ -1.39
PRPF3-204ENST00000470824 ZNF394Q53GI3 561 aa6.38□□□□□ -1.39
PRPF3-204ENST00000470824 HFE2Q6ZVN8 426 aa6.38□□□□□ -1.39
PRPF3-204ENST00000470824 TMEM102Q8N9M5 508 aaPredicted RBP6.38□□□□□ -1.39
PRPF3-204ENST00000470824 ANKRD24Q8TF21 1146 aa6.38□□□□□ -1.39
PRPF3-204ENST00000470824 NXPE3Q969Y0 559 aa6.38□□□□□ -1.39
PRPF3-204ENST00000470824 PBX4Q9BYU1 374 aa6.38□□□□□ -1.39
PRPF3-204ENST00000470824 BHLHE41Q9C0J9 482 aaPredicted RBP6.38□□□□□ -1.39
PRPF3-204ENST00000470824 ACBD3Q9H3P7 528 aa6.38□□□□□ -1.39
PRPF3-204ENST00000470824 CAPN10Q9HC96 672 aa6.38□□□□□ -1.39
PRPF3-204ENST00000470824 NFKBIEO00221 500 aa6.37□□□□□ -1.39
PRPF3-204ENST00000470824 PDE2AO00408 941 aaPredicted RBP6.37□□□□□ -1.39
PRPF3-204ENST00000470824 PCBP4P57723 403 aaKnown RBP6.37□□□□□ -1.39
PRPF3-204ENST00000470824 CCDC85BQ15834 202 aaPredicted RBP6.37□□□□□ -1.39
PRPF3-204ENST00000470824 ERMP1Q7Z2K6 904 aa6.37□□□□□ -1.39
PRPF3-204ENST00000470824 SLC43A3Q8NBI5 491 aa6.37□□□□□ -1.39
PRPF3-204ENST00000470824 CEP44Q9C0F1 390 aa6.37□□□□□ -1.39
PRPF3-204ENST00000470824 SRA1Q9HD15 236 aaKnown RBP6.37□□□□□ -1.39
PRPF3-204ENST00000470824 NSFL1CQ9UNZ2 370 aaKnown RBP6.37□□□□□ -1.39
PRPF3-204ENST00000470824 PCDHGB7Q9Y5F8 929 aa6.37□□□□□ -1.39
PRPF3-204ENST00000470824 A0A096LPE4 126 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 A0A1W2PPZ6 126 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 H3BM21 787 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 SMNDC1O75940 238 aaKnown RBP eCLIP6.36□□□□□ -1.39
PRPF3-204ENST00000470824 ARAFP10398 606 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 RLBP1P12271 317 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 EIF2AK2P19525 551 aaKnown RBP6.36□□□□□ -1.39
PRPF3-204ENST00000470824 ITPKAP23677 461 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 GRIA4P48058 902 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 RACK1P63244 317 aaKnown RBP6.36□□□□□ -1.39
PRPF3-204ENST00000470824 PWP1Q13610 501 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 SPRED3Q2MJR0 410 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 SV2BQ7L1I2 683 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 RELL1Q8IUW5 271 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 MICALL1Q8N3F8 863 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 ASAP3Q8TDY4 903 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 TNFRSF25Q93038 417 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 RSRP1Q9BUV0 290 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 RASSF4Q9H2L5 321 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 INPP5FQ9Y2H2 1132 aa6.36□□□□□ -1.39
PRPF3-204ENST00000470824 ERBB4Q15303 1308 aa6.35□□□□□ -1.39
PRPF3-204ENST00000470824 METTL12A8MUP2 240 aa6.35□□□□□ -1.39
PRPF3-204ENST00000470824 ADH6P28332 368 aa6.35□□□□□ -1.39
PRPF3-204ENST00000470824 MAP2K3P46734 347 aa6.35□□□□□ -1.39
PRPF3-204ENST00000470824 ATP11AP98196 1134 aa6.35□□□□□ -1.39
PRPF3-204ENST00000470824 CEP135Q66GS9 1140 aa6.35□□□□□ -1.39
PRPF3-204ENST00000470824 FAM35AQ86V20 835 aa6.35□□□□□ -1.39
PRPF3-204ENST00000470824 NPAS3Q8IXF0 933 aa6.35□□□□□ -1.39
PRPF3-204ENST00000470824 HHIPQ96QV1 700 aa6.35□□□□□ -1.39
PRPF3-204ENST00000470824 POP1Q99575 1024 aaKnown RBP6.35□□□□□ -1.39
PRPF3-204ENST00000470824 TINF2Q9BSI4 451 aa6.35□□□□□ -1.39
PRPF3-204ENST00000470824 COPRSQ9NQ92 184 aa6.35□□□□□ -1.39
PRPF3-204ENST00000470824 PPP1R1BQ9UD71 204 aaPredicted RBP6.35□□□□□ -1.39
PRPF3-204ENST00000470824 ADARB2-AS1A8MUL3 147 aa6.34□□□□□ -1.39
PRPF3-204ENST00000470824 CPB1P15086 417 aa6.34□□□□□ -1.39
PRPF3-204ENST00000470824 TNNI2P48788 182 aa6.34□□□□□ -1.39
PRPF3-204ENST00000470824 RPS26P11Q5JNZ5 115 aaPredicted RBP6.34□□□□□ -1.39
PRPF3-204ENST00000470824 TPTE2Q6XPS3 522 aa6.34□□□□□ -1.39
PRPF3-204ENST00000470824 VPS37DQ86XT2 251 aa6.34□□□□□ -1.39
PRPF3-204ENST00000470824 PLD4Q96BZ4 506 aa6.34□□□□□ -1.39
PRPF3-204ENST00000470824 MBIPQ9NS73 344 aa6.34□□□□□ -1.39
PRPF3-204ENST00000470824 KBTBD4Q9NVX7 518 aa6.34□□□□□ -1.39
PRPF3-204ENST00000470824 SLC6A14Q9UN76 642 aa6.34□□□□□ -1.39
PRPF3-204ENST00000470824 FBXO24O75426 580 aa6.33□□□□□ -1.4
PRPF3-204ENST00000470824 GBP2P32456 591 aaPredicted RBP6.33□□□□□ -1.4
PRPF3-204ENST00000470824 ADH7P40394 386 aa6.33□□□□□ -1.4
PRPF3-204ENST00000470824 GAS6Q14393 721 aa6.33□□□□□ -1.4
PRPF3-204ENST00000470824 ELMSAN1Q6PJG2 1045 aa6.33□□□□□ -1.4
PRPF3-204ENST00000470824 BSNDQ8WZ55 320 aa6.33□□□□□ -1.4
PRPF3-204ENST00000470824 TANGO6Q9C0B7 1094 aa6.33□□□□□ -1.4
PRPF3-204ENST00000470824 ZNF576Q9H609 170 aa6.33□□□□□ -1.4
PRPF3-204ENST00000470824 KLF15Q9UIH9 416 aa6.33□□□□□ -1.4
PRPF3-204ENST00000470824 FAM177BA6PVY3 158 aa6.32□□□□□ -1.4
PRPF3-204ENST00000470824 NEURL1BA8MQ27 555 aa6.32□□□□□ -1.4
PRPF3-204ENST00000470824 MINDY4BA8MYZ0 360 aa6.32□□□□□ -1.4
PRPF3-204ENST00000470824 PTPRAP18433 802 aa6.32□□□□□ -1.4
PRPF3-204ENST00000470824 ALAS2P22557 587 aa6.32□□□□□ -1.4
PRPF3-204ENST00000470824 LORP23490 312 aaPredicted RBP6.32□□□□□ -1.4
PRPF3-204ENST00000470824 MAP3K10Q02779 954 aa6.32□□□□□ -1.4
PRPF3-204ENST00000470824 ARID5AQ03989 594 aa6.32□□□□□ -1.4
PRPF3-204ENST00000470824 PERM1Q5SV97 790 aa6.32□□□□□ -1.4
PRPF3-204ENST00000470824 UBXN4Q92575 508 aa6.32□□□□□ -1.4
PRPF3-204ENST00000470824 TMEM74Q96NL1 305 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms