RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, human

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFTN1-208	ENST00000470458	MICALL2	Q8IY33	904 aa		13.57	□□□□□ -0.24
RFTN1-208	ENST00000470458	COL4A5	P29400	1685 aa		13.56	□□□□□ -0.24
RFTN1-208	ENST00000470458	TMEM88B	A6NKF7	163 aa		13.56	□□□□□ -0.24
RFTN1-208	ENST00000470458	CIAO1	O76071	339 aa		13.56	□□□□□ -0.24
RFTN1-208	ENST00000470458	METTL24	Q5JXM2	366 aa		13.56	□□□□□ -0.24
RFTN1-208	ENST00000470458	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.56	□□□□□ -0.24
RFTN1-208	ENST00000470458	DCPS	Q96C86	337 aa	Known RBP	13.56	□□□□□ -0.24
RFTN1-208	ENST00000470458	ITGBL1	O95965	494 aa	Predicted RBP	13.55	□□□□□ -0.24
RFTN1-208	ENST00000470458	GNAI2	P04899	355 aa		13.55	□□□□□ -0.24
RFTN1-208	ENST00000470458	IFIT1	P09914	478 aa	Known RBP	13.55	□□□□□ -0.24
RFTN1-208	ENST00000470458	EPHA10	Q5JZY3	1008 aa		13.55	□□□□□ -0.24
RFTN1-208	ENST00000470458	KAZALD1	Q96I82	304 aa		13.55	□□□□□ -0.24
RFTN1-208	ENST00000470458	CD209	Q9NNX6	404 aa		13.55	□□□□□ -0.24
RFTN1-208	ENST00000470458	RIPOR2	Q9Y4F9	1068 aa		13.55	□□□□□ -0.24
RFTN1-208	ENST00000470458	PASK	Q96RG2	1323 aa		13.55	□□□□□ -0.24
RFTN1-208	ENST00000470458	ADAMTSL1	Q8N6G6	1762 aa		13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	EYA2	O00167	538 aa		13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	PLIN1	O60240	522 aa		13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	SASH1	O94885	1247 aa		13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	PDE8B	O95263	885 aa		13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	TRIM27	P14373	513 aa		13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	IL1R1	P14778	569 aa		13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	HIBADH	P31937	336 aa	Known RBP	13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	IL15	P40933	162 aa	Predicted RBP	13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	ZNF280A	P59817	542 aa	Predicted RBP	13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	PUM3	Q15397	648 aa	Known RBP	13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	ANKRD44	Q8N8A2	993 aa		13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	KLRG1	Q96E93	195 aa		13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	TRPM7	Q96QT4	1865 aa		13.54	□□□□□ -0.24
RFTN1-208	ENST00000470458	MYO1B	O43795	1136 aa		13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	TAF5L	O75529	589 aa		13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	BCAR3	O75815	825 aa		13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	KIF4B	Q2VIQ3	1234 aa		13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	MAP1S	Q66K74	1059 aa	Predicted RBP	13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	SULF1	Q8IWU6	871 aa		13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	DZIP1L	Q8IYY4	767 aa	Known RBP	13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	TBC1D22A	Q8WUA7	517 aa		13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	FBXW7	Q969H0	707 aa		13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	ZNF594	Q96JF6	807 aa	Predicted RBP	13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	GNL3L	Q9NVN8	582 aa	Known RBP	13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	CEP126	Q9P2H0	1117 aa		13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	AKAP2	Q9Y2D5	859 aa		13.53	□□□□□ -0.24
RFTN1-208	ENST00000470458	FRAT2	O75474	233 aa	Predicted RBP	13.52	□□□□□ -0.25
RFTN1-208	ENST00000470458	SLC5A1	P13866	664 aa		13.52	□□□□□ -0.25
RFTN1-208	ENST00000470458	ECE1	P42892	770 aa		13.52	□□□□□ -0.25
RFTN1-208	ENST00000470458	DACT2	Q5SW24	774 aa		13.52	□□□□□ -0.25
RFTN1-208	ENST00000470458	LPIN2	Q92539	896 aa		13.52	□□□□□ -0.25
RFTN1-208	ENST00000470458	GPR101	Q96P66	508 aa	Predicted RBP	13.52	□□□□□ -0.25
RFTN1-208	ENST00000470458	MYOZ2	Q9NPC6	264 aa		13.52	□□□□□ -0.25
RFTN1-208	ENST00000470458	COPRS	Q9NQ92	184 aa		13.52	□□□□□ -0.25
RFTN1-208	ENST00000470458	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.52	□□□□□ -0.25
RFTN1-208	ENST00000470458	PITPNM2	Q9BZ72	1349 aa		13.52	□□□□□ -0.25
RFTN1-208	ENST00000470458	SCN9A	Q15858	1988 aa		13.52	□□□□□ -0.25
RFTN1-208	ENST00000470458	GTF2I	P78347	998 aa		13.51	□□□□□ -0.25
RFTN1-208	ENST00000470458	MTX1	Q13505	466 aa		13.51	□□□□□ -0.25
RFTN1-208	ENST00000470458	DNAJC5G	Q8N7S2	189 aa		13.51	□□□□□ -0.25
RFTN1-208	ENST00000470458	HELB	Q8NG08	1087 aa	Predicted RBP	13.51	□□□□□ -0.25
RFTN1-208	ENST00000470458	HHIPL1	Q96JK4	782 aa		13.51	□□□□□ -0.25
RFTN1-208	ENST00000470458	GML	Q99445	158 aa		13.51	□□□□□ -0.25
RFTN1-208	ENST00000470458	SUGT1	Q9Y2Z0	365 aa		13.51	□□□□□ -0.25
RFTN1-208	ENST00000470458	LRRFIP2	Q9Y608	721 aa	Known RBP	13.51	□□□□□ -0.25
RFTN1-208	ENST00000470458	COL4A1	P02462	1669 aa		13.5	□□□□□ -0.25
RFTN1-208	ENST00000470458	FAM205A	Q6ZU69	1335 aa		13.5	□□□□□ -0.25
RFTN1-208	ENST00000470458	ZBTB22	O15209	634 aa		13.5	□□□□□ -0.25
RFTN1-208	ENST00000470458	SRGAP3	O43295	1099 aa		13.5	□□□□□ -0.25
RFTN1-208	ENST00000470458	POTEI	P0CG38	1075 aa		13.5	□□□□□ -0.25
RFTN1-208	ENST00000470458	POTEJ	P0CG39	1038 aa		13.5	□□□□□ -0.25
RFTN1-208	ENST00000470458	PTPN12	Q05209	780 aa	Known RBP	13.5	□□□□□ -0.25
RFTN1-208	ENST00000470458	KRT26	Q7Z3Y9	468 aa		13.5	□□□□□ -0.25
RFTN1-208	ENST00000470458	SLC51A	Q86UW1	340 aa		13.5	□□□□□ -0.25
RFTN1-208	ENST00000470458	TDRD7	Q8NHU6	1098 aa	Known RBP	13.5	□□□□□ -0.25
RFTN1-208	ENST00000470458	KCNQ5	Q9NR82	932 aa		13.5	□□□□□ -0.25
RFTN1-208	ENST00000470458	POLR2A	P24928	1970 aa	Known RBP	13.5	□□□□□ -0.25
RFTN1-208	ENST00000470458	MAST3	O60307	1309 aa		13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	SEMA3E	O15041	775 aa		13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	NF2	P35240	595 aa		13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	DEFB115	Q30KQ5	88 aa		13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	RBM26	Q5T8P6	1007 aa	Known RBP	13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	SAMD7	Q7Z3H4	446 aa		13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	TXNRD3	Q86VQ6	643 aa		13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	JMY	Q8N9B5	988 aa		13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	MTMR14	Q8NCE2	650 aa		13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	MEIS3	Q99687	375 aa		13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	MRI	Q9BWK5	157 aa		13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	ABT1	Q9ULW3	272 aa	Known RBP	13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458		A0A1B0GUL6	1792 aa		13.49	□□□□□ -0.25
RFTN1-208	ENST00000470458	RFX5	P48382	616 aa	Predicted RBP	13.48	□□□□□ -0.25
RFTN1-208	ENST00000470458	FKBP1B	P68106	108 aa		13.48	□□□□□ -0.25
RFTN1-208	ENST00000470458	HDLBP	Q00341	1268 aa	Known RBP	13.48	□□□□□ -0.25
RFTN1-208	ENST00000470458	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
RFTN1-208	ENST00000470458	SCARF1	Q14162	830 aa		13.48	□□□□□ -0.25
RFTN1-208	ENST00000470458	DLGAP5	Q15398	846 aa		13.48	□□□□□ -0.25
RFTN1-208	ENST00000470458	FBXO33	Q7Z6M2	555 aa		13.48	□□□□□ -0.25
RFTN1-208	ENST00000470458	ITPRIP	Q8IWB1	547 aa		13.48	□□□□□ -0.25
RFTN1-208	ENST00000470458	ZGPAT	Q8N5A5	531 aa	Known RBP	13.48	□□□□□ -0.25
RFTN1-208	ENST00000470458	C2orf69	Q8N8R5	385 aa		13.48	□□□□□ -0.25
RFTN1-208	ENST00000470458	WDR66	Q8TBY9	1149 aa		13.48	□□□□□ -0.25
RFTN1-208	ENST00000470458	CLUAP1	Q96AJ1	413 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms