RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 MPHOSPH8Q99549 860 aa11.58□□□□□ -0.56
NUP50-214ENST00000469163 TSPY26PQ9H489 355 aa11.58□□□□□ -0.56
NUP50-214ENST00000469163 PTPRCP08575 1304 aa11.58□□□□□ -0.56
NUP50-214ENST00000469163 CCDC196A0A1B0GTZ2 297 aa11.58□□□□□ -0.56
NUP50-214ENST00000469163 WASHC4Q2M389 1173 aa11.58□□□□□ -0.56
NUP50-214ENST00000469163 CWC25Q9NXE8 425 aaPredicted RBP11.58□□□□□ -0.56
NUP50-214ENST00000469163 SSH2Q76I76 1423 aa11.58□□□□□ -0.56
NUP50-214ENST00000469163 ADCY5O95622 1261 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 EPHA10Q5JZY3 1008 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 SPC24Q8NBT2 197 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 GIMAP7Q8NHV1 300 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 FSD1Q9BTV5 496 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 MAGEA9P43362 315 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 CRKLP46109 303 aaKnown RBP11.57□□□□□ -0.56
NUP50-214ENST00000469163 TPM4P67936 248 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 FBXO38Q6PIJ6 1188 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 LDHAL6AQ6ZMR3 332 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 DDX46Q7L014 1031 aaKnown RBP11.57□□□□□ -0.56
NUP50-214ENST00000469163 CPSF2Q9P2I0 782 aaKnown RBP11.57□□□□□ -0.56
NUP50-214ENST00000469163 PYCARDQ9ULZ3 195 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 SOS1Q07889 1333 aaPredicted RBP11.57□□□□□ -0.56
NUP50-214ENST00000469163 TPM1P09493 284 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 SYCP1Q15431 976 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 ABCF2Q9UG63 623 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 ITSN1Q15811 1721 aa11.57□□□□□ -0.56
NUP50-214ENST00000469163 SMTNL1A8MU46 457 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 ANKRD65E5RJM6 399 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 DDIT3P35638 169 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 ST5P78524 1137 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 TRDNQ13061 729 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 SLFNL1Q499Z3 407 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 METTL24Q5JXM2 366 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 TMEM63CQ9P1W3 806 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 ADGRB2O60241 1585 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 COL3A1P02461 1466 aaPredicted RBP11.56□□□□□ -0.56
NUP50-214ENST00000469163 DNAJC14Q6Y2X3 702 aaPredicted RBP11.56□□□□□ -0.56
NUP50-214ENST00000469163 SMARCE1Q969G3 411 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 PUS3Q9BZE2 481 aaKnown RBP11.56□□□□□ -0.56
NUP50-214ENST00000469163 UPF3BQ9BZI7 483 aaKnown RBP11.56□□□□□ -0.56
NUP50-214ENST00000469163 RPS6KL1Q9Y6S9 549 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 G3V3G9 751 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 SF3B2Q13435 895 aaKnown RBP11.56□□□□□ -0.56
NUP50-214ENST00000469163 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 AP1ARQ63HQ0 302 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 FAM196AQ6ZSG2 479 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 LINS1Q8NG48 757 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 TCEANC2Q96MN5 208 aa11.56□□□□□ -0.56
NUP50-214ENST00000469163 LMAN1P49257 510 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 NUCB2P80303 420 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 ELF2Q15723 593 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 BEND3Q5T5X7 828 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 USPL1Q5W0Q7 1092 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 RPAP2Q8IXW5 612 aaPredicted RBP11.55□□□□□ -0.56
NUP50-214ENST00000469163 PPM1EQ8WY54 764 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 GJD4Q96KN9 370 aaPredicted RBP11.55□□□□□ -0.56
NUP50-214ENST00000469163 LMBRD1Q9NUN5 540 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 SMC2O95347 1197 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 MMS22LQ6ZRQ5 1243 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 TMTC2Q8N394 836 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 KIAA1524Q8TCG1 905 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 CRB1P82279 1406 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 CTAGE5O15320 804 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 CHGBP05060 677 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 IGKV5-2P06315 115 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 MX1P20591 662 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 TFCP2Q12800 502 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 GCKRQ14397 625 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 SF3A1Q15459 793 aaKnown RBP11.55□□□□□ -0.56
NUP50-214ENST00000469163 CC2D2BQ6DHV5 1058 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 ANKRD44Q8N8A2 993 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 RHPN1Q8TCX5 695 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 KIF1BPQ96EK5 621 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 NWD1Q149M9 1564 aa11.55□□□□□ -0.56
NUP50-214ENST00000469163 NEURL1BA8MQ27 555 aa11.54□□□□□ -0.56
NUP50-214ENST00000469163 PSMD2Q13200 908 aa11.54□□□□□ -0.56
NUP50-214ENST00000469163 IFIT5Q13325 482 aaKnown RBP11.54□□□□□ -0.56
NUP50-214ENST00000469163 CCDC96Q2M329 555 aa11.54□□□□□ -0.56
NUP50-214ENST00000469163 ARMC3Q5W041 872 aa11.54□□□□□ -0.56
NUP50-214ENST00000469163 TLR7Q9NYK1 1049 aaKnown RBP11.54□□□□□ -0.56
NUP50-214ENST00000469163 XIRP1Q702N8 1843 aaKnown RBP11.54□□□□□ -0.56
NUP50-214ENST00000469163 TOPAZ1Q8N9V7 1692 aa11.54□□□□□ -0.56
NUP50-214ENST00000469163 IRS4O14654 1257 aaPredicted RBP11.54□□□□□ -0.56
NUP50-214ENST00000469163 IDH1O75874 414 aaKnown RBP11.54□□□□□ -0.56
NUP50-214ENST00000469163 LRRC24Q50LG9 513 aa11.54□□□□□ -0.56
NUP50-214ENST00000469163 SWT1Q5T5J6 900 aaKnown RBP11.54□□□□□ -0.56
NUP50-214ENST00000469163 INTS3Q68E01 1043 aaKnown RBP11.54□□□□□ -0.56
NUP50-214ENST00000469163 GCC1Q96CN9 775 aa11.54□□□□□ -0.56
NUP50-214ENST00000469163 BIN2Q9UBW5 565 aaPredicted RBP11.54□□□□□ -0.56
NUP50-214ENST00000469163 TRPC5Q9UL62 973 aaPredicted RBP11.53□□□□□ -0.56
NUP50-214ENST00000469163 KDRP35968 1356 aa11.53□□□□□ -0.56
NUP50-214ENST00000469163 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
NUP50-214ENST00000469163 PAX7P23759 505 aa11.53□□□□□ -0.56
NUP50-214ENST00000469163 JAKMIP3Q5VZ66 844 aa11.53□□□□□ -0.56
NUP50-214ENST00000469163 GPT2Q8TD30 523 aa11.53□□□□□ -0.56
NUP50-214ENST00000469163 CEP126Q9P2H0 1117 aa11.53□□□□□ -0.56
NUP50-214ENST00000469163 SPATA31A1Q5TZJ5 1347 aa11.53□□□□□ -0.56
NUP50-214ENST00000469163 RTL1A6NKG5 1358 aa11.53□□□□□ -0.56
NUP50-214ENST00000469163 ERVV-2B6SEH9 535 aa11.53□□□□□ -0.56
NUP50-214ENST00000469163 LEKR1Q6ZMV7 388 aa11.53□□□□□ -0.56
NUP50-214ENST00000469163 ARHGAP45Q92619 1136 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms