RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TXNRD3Q86VQ6 643 aa31.25■■■□□ 2.59
PTCH1-210ENST00000468211 USP17L3A6NCW0 530 aa31.24■■■□□ 2.59
PTCH1-210ENST00000468211 USP17L4A6NCW7 530 aa31.24■■■□□ 2.59
PTCH1-210ENST00000468211 USP17L1Q7RTZ2 530 aa31.24■■■□□ 2.59
PTCH1-210ENST00000468211 IGHMBP2P38935 993 aaKnown RBP31.23■■■□□ 2.59
PTCH1-210ENST00000468211 HUNKP57058 714 aa31.23■■■□□ 2.59
PTCH1-210ENST00000468211 ZIC5Q96T25 663 aa31.23■■■□□ 2.59
PTCH1-210ENST00000468211 MXD3Q9BW11 206 aa31.23■■■□□ 2.59
PTCH1-210ENST00000468211 A0A1B0GUL6 1792 aa31.22■■■□□ 2.59
PTCH1-210ENST00000468211 KLRK1P26718 216 aa31.22■■■□□ 2.59
PTCH1-210ENST00000468211 BEND3Q5T5X7 828 aa31.22■■■□□ 2.59
PTCH1-210ENST00000468211 TSKSQ9UJT2 592 aa31.22■■■□□ 2.59
PTCH1-210ENST00000468211 USP17L8P0C7I0 530 aa31.21■■■□□ 2.59
PTCH1-210ENST00000468211 SCARF1Q14162 830 aa31.21■■■□□ 2.59
PTCH1-210ENST00000468211 GBA2Q9HCG7 927 aaPredicted RBP31.21■■■□□ 2.59
PTCH1-210ENST00000468211 ANGEL2Q5VTE6 544 aaKnown RBP31.2■■■□□ 2.59
PTCH1-210ENST00000468211 BEGAINQ9BUH8 593 aa31.2■■■□□ 2.59
PTCH1-210ENST00000468211 MYOZ2Q9NPC6 264 aa31.2■■■□□ 2.59
PTCH1-210ENST00000468211 LEMD3Q9Y2U8 911 aa31.2■■■□□ 2.59
PTCH1-210ENST00000468211 FOXO4P98177 505 aa31.19■■■□□ 2.58
PTCH1-210ENST00000468211 DACT2Q5SW24 774 aa31.19■■■□□ 2.58
PTCH1-210ENST00000468211 SULF1Q8IWU6 871 aa31.19■■■□□ 2.58
PTCH1-210ENST00000468211 ZNF804BA4D1E1 1349 aa31.19■■■□□ 2.58
PTCH1-210ENST00000468211 MPHOSPH8Q99549 860 aa31.18■■■□□ 2.58
PTCH1-210ENST00000468211 CDCA5Q96FF9 252 aa31.17■■■□□ 2.58
PTCH1-210ENST00000468211 BRPF1P55201 1214 aaPredicted RBP31.16■■■□□ 2.58
PTCH1-210ENST00000468211 CHRNDQ07001 517 aa31.16■■■□□ 2.58
PTCH1-210ENST00000468211 EPHA10Q5JZY3 1008 aa31.16■■■□□ 2.58
PTCH1-210ENST00000468211 C2orf69Q8N8R5 385 aa31.16■■■□□ 2.58
PTCH1-210ENST00000468211 ANKRD2Q9GZV1 360 aa31.16■■■□□ 2.58
PTCH1-210ENST00000468211 COA1Q9GZY4 146 aa31.16■■■□□ 2.58
PTCH1-210ENST00000468211 SCAF8Q9UPN6 1271 aaKnown RBP31.16■■■□□ 2.58
PTCH1-210ENST00000468211 FAM155AB1AL88 458 aaPredicted RBP31.15■■■□□ 2.58
PTCH1-210ENST00000468211 SNAP23O00161 211 aa31.15■■■□□ 2.58
PTCH1-210ENST00000468211 FBXW7Q969H0 707 aa31.15■■■□□ 2.58
PTCH1-210ENST00000468211 CASP8AP2Q9UKL3 1982 aa31.15■■■□□ 2.58
PTCH1-210ENST00000468211 ZNF521Q96K83 1311 aa31.15■■■□□ 2.58
PTCH1-210ENST00000468211 ANKRD18BA2A2Z9 1011 aa31.14■■■□□ 2.58
PTCH1-210ENST00000468211 RGMBQ6NW40 437 aa31.14■■■□□ 2.58
PTCH1-210ENST00000468211 NOGQ13253 232 aa31.13■■■□□ 2.57
PTCH1-210ENST00000468211 NBPF9Q3BBW0 867 aa31.13■■■□□ 2.57
PTCH1-210ENST00000468211 STRIP1Q5VSL9 837 aa31.13■■■□□ 2.57
PTCH1-210ENST00000468211 HELBQ8NG08 1087 aaPredicted RBP31.13■■■□□ 2.57
PTCH1-210ENST00000468211 TAF5LO75529 589 aa31.12■■■□□ 2.57
PTCH1-210ENST00000468211 CHMP3Q9Y3E7 222 aa31.12■■■□□ 2.57
PTCH1-210ENST00000468211 IRS2Q9Y4H2 1338 aa31.12■■■□□ 2.57
PTCH1-210ENST00000468211 LMBR1LQ6UX01 489 aa31.11■■■□□ 2.57
PTCH1-210ENST00000468211 PITPNM2Q9BZ72 1349 aa31.1■■■□□ 2.57
PTCH1-210ENST00000468211 GRM8O00222 908 aa31.1■■■□□ 2.57
PTCH1-210ENST00000468211 IFIT5Q13325 482 aaKnown RBP31.1■■■□□ 2.57
PTCH1-210ENST00000468211 TTLL5Q6EMB2 1281 aa31.09■■■□□ 2.57
PTCH1-210ENST00000468211 ZNF594Q96JF6 807 aaPredicted RBP31.09■■■□□ 2.57
PTCH1-210ENST00000468211 KCNJ4P48050 445 aa31.08■■■□□ 2.57
PTCH1-210ENST00000468211 ZNF157P51786 506 aaPredicted RBP31.08■■■□□ 2.57
PTCH1-210ENST00000468211 PRAMEF18Q5VWM3 479 aa31.08■■■□□ 2.57
PTCH1-210ENST00000468211 MYO3BQ8WXR4 1341 aa31.07■■■□□ 2.56
PTCH1-210ENST00000468211 WNT10BO00744 389 aa31.07■■■□□ 2.56
PTCH1-210ENST00000468211 CA12O43570 354 aa31.07■■■□□ 2.56
PTCH1-210ENST00000468211 GTF2IP78347 998 aa31.07■■■□□ 2.56
PTCH1-210ENST00000468211 SLC4A10Q6U841 1118 aa31.07■■■□□ 2.56
PTCH1-210ENST00000468211 CD209Q9NNX6 404 aa31.07■■■□□ 2.56
PTCH1-210ENST00000468211 PAPPA2Q9BXP8 1791 aa31.07■■■□□ 2.56
PTCH1-210ENST00000468211 KIF23Q02241 960 aaPredicted RBP31.06■■■□□ 2.56
PTCH1-210ENST00000468211 OGFOD1Q8N543 542 aa31.06■■■□□ 2.56
PTCH1-210ENST00000468211 CCDC102AQ96A19 550 aa31.06■■■□□ 2.56
PTCH1-210ENST00000468211 ABHD8Q96I13 439 aa31.06■■■□□ 2.56
PTCH1-210ENST00000468211 AKAP11Q9UKA4 1901 aa31.05■■■□□ 2.56
PTCH1-210ENST00000468211 SASH1O94885 1247 aa31.05■■■□□ 2.56
PTCH1-210ENST00000468211 MOB2Q70IA6 237 aa31.05■■■□□ 2.56
PTCH1-210ENST00000468211 KIAA0825Q8IV33 1275 aa31.05■■■□□ 2.56
PTCH1-210ENST00000468211 C9orf78Q9NZ63 289 aaPredicted RBP31.05■■■□□ 2.56
PTCH1-210ENST00000468211 ALDH1L1O75891 902 aa31.04■■■□□ 2.56
PTCH1-210ENST00000468211 C15orf52Q6ZUT6 534 aaKnown RBP31.04■■■□□ 2.56
PTCH1-210ENST00000468211 SRCIN1Q9C0H9 1055 aa31.04■■■□□ 2.56
PTCH1-210ENST00000468211 SLC10A3P09131 477 aa31.03■■■□□ 2.56
PTCH1-210ENST00000468211 KAZALD1Q96I82 304 aa31.03■■■□□ 2.56
PTCH1-210ENST00000468211 CCDC57Q2TAC2 916 aa31.02■■■□□ 2.56
PTCH1-210ENST00000468211 CERS5Q8N5B7 392 aa31.02■■■□□ 2.56
PTCH1-210ENST00000468211 SUCLG2Q96I99 432 aa31.02■■■□□ 2.56
PTCH1-210ENST00000468211 MRPL50Q8N5N7 158 aaKnown RBP31.01■■■□□ 2.55
PTCH1-210ENST00000468211 ZBED3Q96IU2 234 aaPredicted RBP31.01■■■□□ 2.55
PTCH1-210ENST00000468211 PLIN1O60240 522 aa31■■■□□ 2.55
PTCH1-210ENST00000468211 NBPF7P0C2Y1 421 aaPredicted RBP31■■■□□ 2.55
PTCH1-210ENST00000468211 LDHAL6AQ6ZMR3 332 aa31■■■□□ 2.55
PTCH1-210ENST00000468211 RASAL3Q86YV0 1011 aa31■■■□□ 2.55
PTCH1-210ENST00000468211 FKBP1BP68106 108 aa30.99■■■□□ 2.55
PTCH1-210ENST00000468211 ECM29Q5VYK3 1845 aa30.98■■■□□ 2.55
PTCH1-210ENST00000468211 UBE2Q2LH0YL09 131 aa30.98■■■□□ 2.55
PTCH1-210ENST00000468211 TAF7LQ5H9L4 462 aa30.98■■■□□ 2.55
PTCH1-210ENST00000468211 CSRNP1Q96S65 589 aa30.98■■■□□ 2.55
PTCH1-210ENST00000468211 CNNM1Q9NRU3 951 aa30.98■■■□□ 2.55
PTCH1-210ENST00000468211 IL1R1P14778 569 aa30.97■■■□□ 2.55
PTCH1-210ENST00000468211 PUS3Q9BZE2 481 aaKnown RBP30.97■■■□□ 2.55
PTCH1-210ENST00000468211 HDAC9Q9UKV0 1011 aa30.97■■■□□ 2.55
PTCH1-210ENST00000468211 PCDHAC2Q9Y5I4 1007 aa30.97■■■□□ 2.55
PTCH1-210ENST00000468211 MMP14P50281 582 aa30.96■■■□□ 2.55
PTCH1-210ENST00000468211 ZNF804AQ7Z570 1209 aa30.96■■■□□ 2.55
PTCH1-210ENST00000468211 RNF186Q9NXI6 227 aa30.96■■■□□ 2.55
PTCH1-210ENST00000468211 JAG2Q9Y219 1238 aa30.96■■■□□ 2.55
PTCH1-210ENST00000468211 UTYO14607 1347 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms