RNA–Protein interactions for RNA: ENST00000467095.5

SYN3-208, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-208ENST00000467095 C1orf115Q9H7X2 142 aa8.8□□□□□ -1
SYN3-208ENST00000467095 C9orf78Q9NZ63 289 aaPredicted RBP8.8□□□□□ -1
SYN3-208ENST00000467095 LRRFIP2Q9Y608 721 aaKnown RBP8.8□□□□□ -1
SYN3-208ENST00000467095 PNMA6EA0A0J9YXQ4 647 aa8.79□□□□□ -1
SYN3-208ENST00000467095 PRPF40BQ6NWY9 871 aaKnown RBP8.79□□□□□ -1
SYN3-208ENST00000467095 ITPRIPQ8IWB1 547 aa8.79□□□□□ -1
SYN3-208ENST00000467095 SIRT2Q8IXJ6 389 aa8.79□□□□□ -1
SYN3-208ENST00000467095 KLHDC4Q8TBB5 520 aa8.79□□□□□ -1
SYN3-208ENST00000467095 KHSRPQ92945 711 aaKnown RBP eCLIP8.79□□□□□ -1
SYN3-208ENST00000467095 ZNF622Q969S3 477 aaKnown RBP eCLIP8.79□□□□□ -1
SYN3-208ENST00000467095 CRAMP1Q96RY5 1269 aa8.79□□□□□ -1
SYN3-208ENST00000467095 CRBNQ96SW2 442 aa8.79□□□□□ -1
SYN3-208ENST00000467095 ZBTB40Q9NUA8 1239 aa8.79□□□□□ -1
SYN3-208ENST00000467095 PIM2Q9P1W9 311 aa8.79□□□□□ -1
SYN3-208ENST00000467095 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.79□□□□□ -1
SYN3-208ENST00000467095 POLR2AP24928 1970 aaKnown RBP8.79□□□□□ -1
SYN3-208ENST00000467095 ADAMTSL1Q8N6G6 1762 aa8.78□□□□□ -1
SYN3-208ENST00000467095 GRAPQ13588 217 aa8.78□□□□□ -1
SYN3-208ENST00000467095 TTLL6Q8N841 843 aa8.78□□□□□ -1
SYN3-208ENST00000467095 GRAPLQ8TC17 118 aaPredicted RBP8.78□□□□□ -1
SYN3-208ENST00000467095 PUS3Q9BZE2 481 aaKnown RBP8.78□□□□□ -1
SYN3-208ENST00000467095 MYH7P12883 1935 aa8.78□□□□□ -1
SYN3-208ENST00000467095 CDK5RAP2Q96SN8 1893 aa8.77□□□□□ -1.01
SYN3-208ENST00000467095 NFKBIEO00221 500 aa8.77□□□□□ -1.01
SYN3-208ENST00000467095 NPHP1O15259 732 aa8.77□□□□□ -1.01
SYN3-208ENST00000467095 C21orf2O43822 256 aa8.77□□□□□ -1.01
SYN3-208ENST00000467095 UBTFL1P0CB47 393 aaPredicted RBP8.77□□□□□ -1.01
SYN3-208ENST00000467095 ITGA6P23229 1130 aa8.77□□□□□ -1.01
SYN3-208ENST00000467095 IRX6P78412 446 aaPredicted RBP8.77□□□□□ -1.01
SYN3-208ENST00000467095 PTPN12Q05209 780 aaKnown RBP8.77□□□□□ -1.01
SYN3-208ENST00000467095 MTX1Q13505 466 aa8.77□□□□□ -1.01
SYN3-208ENST00000467095 FTSJ3Q8IY81 847 aaKnown RBP8.77□□□□□ -1.01
SYN3-208ENST00000467095 RBM17Q96I25 401 aaKnown RBP8.77□□□□□ -1.01
SYN3-208ENST00000467095 PDZRN3Q9UPQ7 1066 aa8.77□□□□□ -1.01
SYN3-208ENST00000467095 BCS1LQ9Y276 419 aa8.77□□□□□ -1.01
SYN3-208ENST00000467095 ECM29Q5VYK3 1845 aa8.77□□□□□ -1.01
SYN3-208ENST00000467095 IRS2Q9Y4H2 1338 aa8.77□□□□□ -1.01
SYN3-208ENST00000467095 AK9Q5TCS8 1911 aa8.76□□□□□ -1.01
SYN3-208ENST00000467095 DOCK2Q92608 1830 aa8.76□□□□□ -1.01
SYN3-208ENST00000467095 SNAP23O00161 211 aa8.76□□□□□ -1.01
SYN3-208ENST00000467095 RPS8P62241 208 aaKnown RBP8.76□□□□□ -1.01
SYN3-208ENST00000467095 RASSF7Q02833 373 aa8.76□□□□□ -1.01
SYN3-208ENST00000467095 CCDC152Q4G0S7 254 aa8.76□□□□□ -1.01
SYN3-208ENST00000467095 LRRC24Q50LG9 513 aa8.76□□□□□ -1.01
SYN3-208ENST00000467095 DALRD3Q5D0E6 543 aaKnown RBP8.76□□□□□ -1.01
SYN3-208ENST00000467095 CEP85Q6P2H3 762 aa8.76□□□□□ -1.01
SYN3-208ENST00000467095 DDX46Q7L014 1031 aaKnown RBP8.76□□□□□ -1.01
SYN3-208ENST00000467095 ATG9AQ7Z3C6 839 aa8.76□□□□□ -1.01
SYN3-208ENST00000467095 EXOC6Q8TAG9 804 aa8.76□□□□□ -1.01
SYN3-208ENST00000467095 RPGRQ92834 1020 aaKnown RBP8.76□□□□□ -1.01
SYN3-208ENST00000467095 CNKSR1Q969H4 720 aa8.76□□□□□ -1.01
SYN3-208ENST00000467095 PA2G4Q9UQ80 394 aaKnown RBP8.76□□□□□ -1.01
SYN3-208ENST00000467095 PCDHB15Q9Y5E8 787 aa8.76□□□□□ -1.01
SYN3-208ENST00000467095 PPEF1O14829 653 aaPredicted RBP8.75□□□□□ -1.01
SYN3-208ENST00000467095 GNAI3P08754 354 aa8.75□□□□□ -1.01
SYN3-208ENST00000467095 ALDH1B1P30837 517 aa8.75□□□□□ -1.01
SYN3-208ENST00000467095 GPSM2P81274 684 aa8.75□□□□□ -1.01
SYN3-208ENST00000467095 ATP8B2P98198 1209 aa8.75□□□□□ -1.01
SYN3-208ENST00000467095 SP8Q8IXZ3 490 aa8.75□□□□□ -1.01
SYN3-208ENST00000467095 ZNF687Q8N1G0 1237 aa8.75□□□□□ -1.01
SYN3-208ENST00000467095 VGLL2Q8N8G2 317 aa8.75□□□□□ -1.01
SYN3-208ENST00000467095 SSH3Q8TE77 659 aa8.75□□□□□ -1.01
SYN3-208ENST00000467095 GPR101Q96P66 508 aaPredicted RBP8.75□□□□□ -1.01
SYN3-208ENST00000467095 DDX19BQ9UMR2 479 aa8.75□□□□□ -1.01
SYN3-208ENST00000467095 ATP6V0A2Q9Y487 856 aa8.75□□□□□ -1.01
SYN3-208ENST00000467095 RIPOR2Q9Y4F9 1068 aa8.75□□□□□ -1.01
SYN3-208ENST00000467095 BBOX1O75936 387 aa8.74□□□□□ -1.01
SYN3-208ENST00000467095 GNAI2P04899 355 aa8.74□□□□□ -1.01
SYN3-208ENST00000467095 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.74□□□□□ -1.01
SYN3-208ENST00000467095 BSDC1Q9NW68 430 aaPredicted RBP8.74□□□□□ -1.01
SYN3-208ENST00000467095 POLLQ9UGP5 575 aa8.74□□□□□ -1.01
SYN3-208ENST00000467095 MINPP1Q9UNW1 487 aa8.74□□□□□ -1.01
SYN3-208ENST00000467095 ANKRD18BA2A2Z9 1011 aa8.73□□□□□ -1.01
SYN3-208ENST00000467095 C2orf72A6NCS6 295 aa8.73□□□□□ -1.01
SYN3-208ENST00000467095 SASH1O94885 1247 aa8.73□□□□□ -1.01
SYN3-208ENST00000467095 MS4A1P11836 297 aa8.73□□□□□ -1.01
SYN3-208ENST00000467095 KLRK1P26718 216 aa8.73□□□□□ -1.01
SYN3-208ENST00000467095 TXNRD3Q86VQ6 643 aa8.73□□□□□ -1.01
SYN3-208ENST00000467095 ANKRD18AQ8IVF6 992 aa8.73□□□□□ -1.01
SYN3-208ENST00000467095 HELBQ8NG08 1087 aaPredicted RBP8.73□□□□□ -1.01
SYN3-208ENST00000467095 RTFDC1Q9BY42 306 aaPredicted RBP8.73□□□□□ -1.01
SYN3-208ENST00000467095 COPRSQ9NQ92 184 aa8.73□□□□□ -1.01
SYN3-208ENST00000467095 CHMP3Q9Y3E7 222 aa8.73□□□□□ -1.01
SYN3-208ENST00000467095 MYH2Q9UKX2 1941 aa8.73□□□□□ -1.01
SYN3-208ENST00000467095 SCN4AP35499 1836 aa8.73□□□□□ -1.01
SYN3-208ENST00000467095 WDR90Q96KV7 1748 aa8.72□□□□□ -1.01
SYN3-208ENST00000467095 KIF3CO14782 793 aa8.72□□□□□ -1.01
SYN3-208ENST00000467095 SRGAP3O43295 1099 aa8.72□□□□□ -1.01
SYN3-208ENST00000467095 TAF5LO75529 589 aa8.72□□□□□ -1.01
SYN3-208ENST00000467095 CHRNDQ07001 517 aa8.72□□□□□ -1.01
SYN3-208ENST00000467095 IFIT5Q13325 482 aaKnown RBP8.72□□□□□ -1.01
SYN3-208ENST00000467095 GPR162Q16538 588 aa8.72□□□□□ -1.01
SYN3-208ENST00000467095 PODXL2Q9NZ53 605 aa8.72□□□□□ -1.01
SYN3-208ENST00000467095 LTBP3Q9NS15 1303 aa8.72□□□□□ -1.01
SYN3-208ENST00000467095 EYA2O00167 538 aa8.71□□□□□ -1.02
SYN3-208ENST00000467095 HSP90B1P14625 803 aaKnown RBP8.71□□□□□ -1.02
SYN3-208ENST00000467095 FGFR2P21802 821 aa8.71□□□□□ -1.02
SYN3-208ENST00000467095 FKBP4Q02790 459 aaKnown RBP eCLIP8.71□□□□□ -1.02
SYN3-208ENST00000467095 CCDC57Q2TAC2 916 aa8.71□□□□□ -1.02
SYN3-208ENST00000467095 CCDC93Q567U6 631 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms