RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 FAM13BQ9NYF5 915 aa9.21□□□□□ -0.94
XRN1-206ENST00000467077 PTPRAP18433 802 aa9.2□□□□□ -0.94
XRN1-206ENST00000467077 RASSF4Q9H2L5 321 aa9.2□□□□□ -0.94
XRN1-206ENST00000467077 VRTNQ9H8Y1 702 aa9.2□□□□□ -0.94
XRN1-206ENST00000467077 LEMD3Q9Y2U8 911 aa9.2□□□□□ -0.94
XRN1-206ENST00000467077 DDX3YO15523 660 aaKnown RBP9.19□□□□□ -0.94
XRN1-206ENST00000467077 ADAM11O75078 769 aa9.19□□□□□ -0.94
XRN1-206ENST00000467077 EPHA1P21709 976 aa9.19□□□□□ -0.94
XRN1-206ENST00000467077 HOXA10P31260 410 aaPredicted RBP9.19□□□□□ -0.94
XRN1-206ENST00000467077 CABP4P57796 275 aa9.19□□□□□ -0.94
XRN1-206ENST00000467077 TTC39BQ5VTQ0 682 aaPredicted RBP9.19□□□□□ -0.94
XRN1-206ENST00000467077 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
XRN1-206ENST00000467077 FBXL18Q96ME1 805 aa9.19□□□□□ -0.94
XRN1-206ENST00000467077 C8AP07357 584 aa9.18□□□□□ -0.94
XRN1-206ENST00000467077 CPSF6Q16630 551 aaKnown RBP eCLIP9.18□□□□□ -0.94
XRN1-206ENST00000467077 COX20Q5RI15 118 aa9.18□□□□□ -0.94
XRN1-206ENST00000467077 KANK4Q5T7N3 995 aaPredicted RBP9.18□□□□□ -0.94
XRN1-206ENST00000467077 COL13A1Q5TAT6 717 aaPredicted RBP9.18□□□□□ -0.94
XRN1-206ENST00000467077 VSIG10LQ86VR7 867 aa9.18□□□□□ -0.94
XRN1-206ENST00000467077 RUSC1Q9BVN2 902 aa9.18□□□□□ -0.94
XRN1-206ENST00000467077 OSBPL1AQ9BXW6 950 aa9.18□□□□□ -0.94
XRN1-206ENST00000467077 KRTAP4-9Q9BYQ8 210 aa9.18□□□□□ -0.94
XRN1-206ENST00000467077 FNDC3AQ9Y2H6 1198 aaKnown RBP9.18□□□□□ -0.94
XRN1-206ENST00000467077 BRD2P25440 801 aaKnown RBP9.17□□□□□ -0.94
XRN1-206ENST00000467077 RXRBP28702 533 aa9.17□□□□□ -0.94
XRN1-206ENST00000467077 TP53INP2Q8IXH6 220 aa9.17□□□□□ -0.94
XRN1-206ENST00000467077 FBXL6Q8N531 539 aa9.17□□□□□ -0.94
XRN1-206ENST00000467077 POU5F2Q8N7G0 328 aa9.17□□□□□ -0.94
XRN1-206ENST00000467077 KLHDC7BQ96G42 594 aa9.17□□□□□ -0.94
XRN1-206ENST00000467077 H3BRJ5 948 aa9.16□□□□□ -0.94
XRN1-206ENST00000467077 TM4SF5O14894 197 aa9.16□□□□□ -0.94
XRN1-206ENST00000467077 PIP4K2BP78356 416 aa9.16□□□□□ -0.94
XRN1-206ENST00000467077 TPRNQ4KMQ1 711 aa9.16□□□□□ -0.94
XRN1-206ENST00000467077 NCAPG2Q86XI2 1143 aa9.16□□□□□ -0.94
XRN1-206ENST00000467077 ETFBKMTQ8IXQ9 262 aa9.16□□□□□ -0.94
XRN1-206ENST00000467077 WNT8BQ93098 351 aa9.16□□□□□ -0.94
XRN1-206ENST00000467077 PBX4Q9BYU1 374 aa9.16□□□□□ -0.94
XRN1-206ENST00000467077 PPP1R12CQ9BZL4 782 aa9.16□□□□□ -0.94
XRN1-206ENST00000467077 SH2B1Q9NRF2 756 aaPredicted RBP9.16□□□□□ -0.94
XRN1-206ENST00000467077 A6NJR5 290 aa9.15□□□□□ -0.94
XRN1-206ENST00000467077 FOSL1P15407 271 aa9.15□□□□□ -0.94
XRN1-206ENST00000467077 MAP4P27816 1152 aaKnown RBP9.15□□□□□ -0.94
XRN1-206ENST00000467077 NLRP12P59046 1061 aa9.15□□□□□ -0.94
XRN1-206ENST00000467077 ARXQ96QS3 562 aa9.15□□□□□ -0.94
XRN1-206ENST00000467077 CCDC39Q9UFE4 941 aa9.15□□□□□ -0.94
XRN1-206ENST00000467077 KIF4AO95239 1232 aa9.14□□□□□ -0.95
XRN1-206ENST00000467077 JUNBP17275 347 aaPredicted RBP9.14□□□□□ -0.95
XRN1-206ENST00000467077 MSMPQ1L6U9 139 aa9.14□□□□□ -0.95
XRN1-206ENST00000467077 FAM200AQ8TCP9 573 aa9.14□□□□□ -0.95
XRN1-206ENST00000467077 METTL22Q9BUU2 404 aaPredicted RBP9.14□□□□□ -0.95
XRN1-206ENST00000467077 OSGEPQ9NPF4 335 aa9.14□□□□□ -0.95
XRN1-206ENST00000467077 LMOD1P29536 600 aaPredicted RBP9.13□□□□□ -0.95
XRN1-206ENST00000467077 FKBP5Q13451 457 aaPredicted RBP9.13□□□□□ -0.95
XRN1-206ENST00000467077 CALR3Q96L12 384 aaKnown RBP9.13□□□□□ -0.95
XRN1-206ENST00000467077 ABI2Q9NYB9 513 aaPredicted RBP9.13□□□□□ -0.95
XRN1-206ENST00000467077 PRNPP04156 253 aa9.12□□□□□ -0.95
XRN1-206ENST00000467077 ARL4DP49703 201 aa9.12□□□□□ -0.95
XRN1-206ENST00000467077 SGO2Q562F6 1265 aa9.12□□□□□ -0.95
XRN1-206ENST00000467077 C16orf46Q6P387 395 aa9.12□□□□□ -0.95
XRN1-206ENST00000467077 CBLL1Q75N03 491 aa9.12□□□□□ -0.95
XRN1-206ENST00000467077 ADAM19Q9H013 955 aa9.12□□□□□ -0.95
XRN1-206ENST00000467077 F13BP05160 661 aa9.11□□□□□ -0.95
XRN1-206ENST00000467077 ADAMTSL4Q6UY14 1074 aa9.11□□□□□ -0.95
XRN1-206ENST00000467077 SLC7A3Q8WY07 619 aa9.11□□□□□ -0.95
XRN1-206ENST00000467077 PROSER2Q86WR7 435 aaPredicted RBP9.1□□□□□ -0.95
XRN1-206ENST00000467077 AGBL5Q8NDL9 886 aa9.1□□□□□ -0.95
XRN1-206ENST00000467077 ZMYND15Q9H091 742 aa9.1□□□□□ -0.95
XRN1-206ENST00000467077 ITGB5P18084 799 aa9.09□□□□□ -0.95
XRN1-206ENST00000467077 NUTM2GQ5VZR2 741 aa9.09□□□□□ -0.95
XRN1-206ENST00000467077 PAOXQ6QHF9 649 aa9.09□□□□□ -0.95
XRN1-206ENST00000467077 POP1Q99575 1024 aaKnown RBP9.09□□□□□ -0.95
XRN1-206ENST00000467077 CYP26A1O43174 497 aa9.08□□□□□ -0.96
XRN1-206ENST00000467077 FLCNQ8NFG4 579 aa9.08□□□□□ -0.96
XRN1-206ENST00000467077 COL26A1Q96A83 441 aa9.08□□□□□ -0.96
XRN1-206ENST00000467077 BSDC1Q9NW68 430 aaPredicted RBP9.08□□□□□ -0.96
XRN1-206ENST00000467077 FAM95CA0A1B0GW59 222 aa9.07□□□□□ -0.96
XRN1-206ENST00000467077 CYP2E1P05181 493 aaPredicted RBP9.07□□□□□ -0.96
XRN1-206ENST00000467077 ZAP70P43403 619 aa9.07□□□□□ -0.96
XRN1-206ENST00000467077 NFKBIBQ15653 356 aa9.07□□□□□ -0.96
XRN1-206ENST00000467077 CEP120Q8N960 986 aa9.07□□□□□ -0.96
XRN1-206ENST00000467077 C12orf50Q8NA57 414 aaPredicted RBP9.07□□□□□ -0.96
XRN1-206ENST00000467077 SAP130Q9H0E3 1048 aa9.07□□□□□ -0.96
XRN1-206ENST00000467077 CYP4F12Q9HCS2 524 aa9.07□□□□□ -0.96
XRN1-206ENST00000467077 MEGF11A6BM72 1044 aa9.06□□□□□ -0.96
XRN1-206ENST00000467077 C19orf57Q0VDD7 668 aa9.06□□□□□ -0.96
XRN1-206ENST00000467077 GPR152Q8TDT2 470 aa9.06□□□□□ -0.96
XRN1-206ENST00000467077 PRIMPOLQ96LW4 560 aa9.06□□□□□ -0.96
XRN1-206ENST00000467077 PRMT3O60678 531 aa9.05□□□□□ -0.96
XRN1-206ENST00000467077 USP11P51784 963 aa9.05□□□□□ -0.96
XRN1-206ENST00000467077 SWI5Q1ZZU3 235 aa9.05□□□□□ -0.96
XRN1-206ENST00000467077 YIPF2Q9BWQ6 316 aa9.05□□□□□ -0.96
XRN1-206ENST00000467077 KANSL3Q9P2N6 904 aa9.05□□□□□ -0.96
XRN1-206ENST00000467077 TBC1D32Q96NH3 1257 aa9.04□□□□□ -0.96
XRN1-206ENST00000467077 USP26Q9BXU7 913 aa9.04□□□□□ -0.96
XRN1-206ENST00000467077 RFX1P22670 979 aa9.03□□□□□ -0.96
XRN1-206ENST00000467077 PDE12Q6L8Q7 609 aaKnown RBP9.03□□□□□ -0.96
XRN1-206ENST00000467077 CLUAP1Q96AJ1 413 aa9.03□□□□□ -0.96
XRN1-206ENST00000467077 FAM26DQ5JW98 314 aa9.02□□□□□ -0.97
XRN1-206ENST00000467077 NFXL1Q6ZNB6 911 aa9.02□□□□□ -0.97
XRN1-206ENST00000467077 ZNF438Q7Z4V0 828 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms