RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 PNMA8AQ86V59 439 aaPredicted RBP8.33□□□□□ -1.08
UBXN4-205ENST00000467065 VPS33BQ9H267 617 aa8.33□□□□□ -1.08
UBXN4-205ENST00000467065 DBNDD1Q9H9R9 158 aa8.33□□□□□ -1.08
UBXN4-205ENST00000467065 POLLQ9UGP5 575 aa8.33□□□□□ -1.08
UBXN4-205ENST00000467065 ZNRF3Q9ULT6 936 aa8.33□□□□□ -1.08
UBXN4-205ENST00000467065 KIF16BQ96L93 1317 aa8.32□□□□□ -1.08
UBXN4-205ENST00000467065 SHTN1A0MZ66 631 aa8.32□□□□□ -1.08
UBXN4-205ENST00000467065 SNPHO15079 494 aa8.32□□□□□ -1.08
UBXN4-205ENST00000467065 ITGBL1O95965 494 aaPredicted RBP8.32□□□□□ -1.08
UBXN4-205ENST00000467065 WASHC4Q2M389 1173 aa8.32□□□□□ -1.08
UBXN4-205ENST00000467065 CIAPIN1Q6FI81 312 aa8.32□□□□□ -1.08
UBXN4-205ENST00000467065 JMYQ8N9B5 988 aa8.32□□□□□ -1.08
UBXN4-205ENST00000467065 TBC1D16Q8TBP0 767 aa8.32□□□□□ -1.08
UBXN4-205ENST00000467065 DNAAF4Q8WXU2 420 aa8.32□□□□□ -1.08
UBXN4-205ENST00000467065 API5Q9BZZ5 524 aaKnown RBP8.32□□□□□ -1.08
UBXN4-205ENST00000467065 GPRC5DQ9NZD1 345 aa8.32□□□□□ -1.08
UBXN4-205ENST00000467065 MKRN1Q9UHC7 482 aaKnown RBP8.32□□□□□ -1.08
UBXN4-205ENST00000467065 THSD7BQ9C0I4 1608 aa8.32□□□□□ -1.08
UBXN4-205ENST00000467065 ZNF521Q96K83 1311 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 ECM29Q5VYK3 1845 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 MYH13Q9UKX3 1938 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 F6X3S4 739 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 ECE2O60344 883 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 UFL1O94874 794 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 FMR1Q06787 632 aaKnown RBP eCLIP8.31□□□□□ -1.08
UBXN4-205ENST00000467065 TNIP1Q15025 636 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 DOK7Q18PE1 504 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 ZKSCAN2Q63HK3 967 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 ANKRD18AQ8IVF6 992 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 CNTROBQ8N137 903 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 BCL2L13Q9BXK5 485 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 GREM2Q9H772 168 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.31□□□□□ -1.08
UBXN4-205ENST00000467065 ANKIB1Q9P2G1 1089 aa8.31□□□□□ -1.08
UBXN4-205ENST00000467065 H7C1W4 665 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 PSMD14O00487 310 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 GCKRQ14397 625 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 SLC4A10Q6U841 1118 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 USP50Q70EL3 339 aaPredicted RBP8.3□□□□□ -1.08
UBXN4-205ENST00000467065 TRMT2AQ8IZ69 625 aaKnown RBP8.3□□□□□ -1.08
UBXN4-205ENST00000467065 TTLL11Q8NHH1 800 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 TRPM4Q8TD43 1214 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 MARVELD3Q96A59 401 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 CDC5LQ99459 802 aaKnown RBP8.3□□□□□ -1.08
UBXN4-205ENST00000467065 EYA3Q99504 573 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 KCNQ5Q9NR82 932 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 ADARB2Q9NS39 739 aaKnown RBP8.3□□□□□ -1.08
UBXN4-205ENST00000467065 PODXL2Q9NZ53 605 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 GGA1Q9UJY5 639 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 CNTNAP1P78357 1384 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 RTL9Q8NET4 1388 aa8.3□□□□□ -1.08
UBXN4-205ENST00000467065 PTPRCP08575 1304 aa8.29□□□□□ -1.08
UBXN4-205ENST00000467065 XDHP47989 1333 aa8.29□□□□□ -1.08
UBXN4-205ENST00000467065 ARAP2Q8WZ64 1704 aa8.29□□□□□ -1.08
UBXN4-205ENST00000467065 WTIPA6NIX2 430 aaPredicted RBP8.29□□□□□ -1.08
UBXN4-205ENST00000467065 TMEM88BA6NKF7 163 aa8.29□□□□□ -1.08
UBXN4-205ENST00000467065 TRAF5O00463 557 aa8.29□□□□□ -1.08
UBXN4-205ENST00000467065 PYGBP11216 843 aa8.29□□□□□ -1.08
UBXN4-205ENST00000467065 RARSP54136 660 aaKnown RBP8.29□□□□□ -1.08
UBXN4-205ENST00000467065 CASP7P55210 303 aa8.29□□□□□ -1.08
UBXN4-205ENST00000467065 FAM161AQ3B820 660 aa8.29□□□□□ -1.08
UBXN4-205ENST00000467065 MICALL2Q8IY33 904 aa8.29□□□□□ -1.08
UBXN4-205ENST00000467065 LINS1Q8NG48 757 aa8.29□□□□□ -1.08
UBXN4-205ENST00000467065 CNOT7Q9UIV1 285 aaKnown RBP8.29□□□□□ -1.08
UBXN4-205ENST00000467065 NOB1Q9ULX3 412 aaKnown RBP8.29□□□□□ -1.08
UBXN4-205ENST00000467065 G3V3G9 751 aa8.28□□□□□ -1.08
UBXN4-205ENST00000467065 HSPA1AP0DMV8 641 aaKnown RBP8.28□□□□□ -1.08
UBXN4-205ENST00000467065 HSPA1BP0DMV9 641 aaKnown RBP8.28□□□□□ -1.08
UBXN4-205ENST00000467065 CCT4P50991 539 aaKnown RBP8.28□□□□□ -1.08
UBXN4-205ENST00000467065 DCAF8Q5TAQ9 597 aa8.28□□□□□ -1.08
UBXN4-205ENST00000467065 SAMD7Q7Z3H4 446 aa8.28□□□□□ -1.08
UBXN4-205ENST00000467065 PDCD7Q8N8D1 485 aaKnown RBP8.28□□□□□ -1.08
UBXN4-205ENST00000467065 ARHGAP45Q92619 1136 aa8.28□□□□□ -1.08
UBXN4-205ENST00000467065 PLA2G12BQ9BX93 195 aa8.28□□□□□ -1.08
UBXN4-205ENST00000467065 GLIS2Q9BZE0 524 aaPredicted RBP8.28□□□□□ -1.08
UBXN4-205ENST00000467065 ZC3H12CQ9C0D7 883 aaKnown RBP8.28□□□□□ -1.08
UBXN4-205ENST00000467065 C9orf78Q9NZ63 289 aaPredicted RBP8.28□□□□□ -1.08
UBXN4-205ENST00000467065 PCDHB8Q9UN66 801 aa8.28□□□□□ -1.08
UBXN4-205ENST00000467065 MED23Q9ULK4 1368 aa8.27□□□□□ -1.09
UBXN4-205ENST00000467065 H7C1D1 291 aa8.27□□□□□ -1.09
UBXN4-205ENST00000467065 EGFRP00533 1210 aa8.27□□□□□ -1.09
UBXN4-205ENST00000467065 ITGA6P23229 1130 aa8.27□□□□□ -1.09
UBXN4-205ENST00000467065 ATP2B4P23634 1241 aa8.27□□□□□ -1.09
UBXN4-205ENST00000467065 IGHMBP2P38935 993 aaKnown RBP8.27□□□□□ -1.09
UBXN4-205ENST00000467065 HIRAP54198 1017 aaPredicted RBP8.27□□□□□ -1.09
UBXN4-205ENST00000467065 TBC1D10BQ4KMP7 808 aaPredicted RBP8.27□□□□□ -1.09
UBXN4-205ENST00000467065 BEND3Q5T5X7 828 aa8.27□□□□□ -1.09
UBXN4-205ENST00000467065 SSH1Q8WYL5 1049 aa8.27□□□□□ -1.09
UBXN4-205ENST00000467065 BSDC1Q9NW68 430 aaPredicted RBP8.27□□□□□ -1.09
UBXN4-205ENST00000467065 ABT1Q9ULW3 272 aaKnown RBP8.27□□□□□ -1.09
UBXN4-205ENST00000467065 MINPP1Q9UNW1 487 aa8.27□□□□□ -1.09
UBXN4-205ENST00000467065 CHMP3Q9Y3E7 222 aa8.27□□□□□ -1.09
UBXN4-205ENST00000467065 AKAP11Q9UKA4 1901 aa8.27□□□□□ -1.09
UBXN4-205ENST00000467065 CSF1RP07333 972 aa8.26□□□□□ -1.09
UBXN4-205ENST00000467065 VEGFBP49765 207 aa8.26□□□□□ -1.09
UBXN4-205ENST00000467065 EPHA10Q5JZY3 1008 aa8.26□□□□□ -1.09
UBXN4-205ENST00000467065 RBM26Q5T8P6 1007 aaKnown RBP8.26□□□□□ -1.09
UBXN4-205ENST00000467065 ATF7IPQ6VMQ6 1270 aa8.26□□□□□ -1.09
UBXN4-205ENST00000467065 ITPRIPQ8IWB1 547 aa8.26□□□□□ -1.09
UBXN4-205ENST00000467065 DZIP1LQ8IYY4 767 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms