RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 LINC01387J3KSC0 135 aa6.38□□□□□ -1.39
GTF3C3-209ENST00000466862 ADAM11O75078 769 aa6.38□□□□□ -1.39
GTF3C3-209ENST00000466862 SMNDC1O75940 238 aaKnown RBP eCLIP6.38□□□□□ -1.39
GTF3C3-209ENST00000466862 MZF1P28698 734 aaPredicted RBP6.38□□□□□ -1.39
GTF3C3-209ENST00000466862 NOM1Q5C9Z4 860 aaKnown RBP6.38□□□□□ -1.39
GTF3C3-209ENST00000466862 AGGF1Q8N302 714 aaeCLIP6.38□□□□□ -1.39
GTF3C3-209ENST00000466862 C1orf127Q8N9H9 656 aa6.38□□□□□ -1.39
GTF3C3-209ENST00000466862 DCAF11Q8TEB1 546 aa6.38□□□□□ -1.39
GTF3C3-209ENST00000466862 ZFP64Q9NPA5 681 aa6.38□□□□□ -1.39
GTF3C3-209ENST00000466862 RPLP1P05386 114 aaKnown RBP6.37□□□□□ -1.39
GTF3C3-209ENST00000466862 CDC27P30260 824 aa6.37□□□□□ -1.39
GTF3C3-209ENST00000466862 DNM1Q05193 864 aaKnown RBP6.37□□□□□ -1.39
GTF3C3-209ENST00000466862 LRP8Q14114 963 aa6.37□□□□□ -1.39
GTF3C3-209ENST00000466862 FOXD4L4Q8WXT5 416 aaPredicted RBP6.37□□□□□ -1.39
GTF3C3-209ENST00000466862 POP1Q99575 1024 aaKnown RBP6.37□□□□□ -1.39
GTF3C3-209ENST00000466862 FZD6O60353 706 aa6.36□□□□□ -1.39
GTF3C3-209ENST00000466862 NCAPG2Q86XI2 1143 aa6.36□□□□□ -1.39
GTF3C3-209ENST00000466862 SPACA7Q96KW9 195 aa6.36□□□□□ -1.39
GTF3C3-209ENST00000466862 HHIPQ96QV1 700 aa6.36□□□□□ -1.39
GTF3C3-209ENST00000466862 CARD10Q9BWT7 1032 aa6.36□□□□□ -1.39
GTF3C3-209ENST00000466862 DZANK1Q9NVP4 752 aa6.36□□□□□ -1.39
GTF3C3-209ENST00000466862 SOX13Q9UN79 622 aa6.36□□□□□ -1.39
GTF3C3-209ENST00000466862 POLIQ9UNA4 740 aa6.36□□□□□ -1.39
GTF3C3-209ENST00000466862 FSCN2O14926 492 aa6.35□□□□□ -1.39
GTF3C3-209ENST00000466862 PTPRAP18433 802 aa6.35□□□□□ -1.39
GTF3C3-209ENST00000466862 CD68P34810 354 aaPredicted RBP6.35□□□□□ -1.39
GTF3C3-209ENST00000466862 KIAA1211Q6ZU35 1233 aa6.35□□□□□ -1.39
GTF3C3-209ENST00000466862 GJD3Q8N144 294 aa6.35□□□□□ -1.39
GTF3C3-209ENST00000466862 UBL7Q96S82 380 aaPredicted RBP6.35□□□□□ -1.39
GTF3C3-209ENST00000466862 SH2B1Q9NRF2 756 aaPredicted RBP6.35□□□□□ -1.39
GTF3C3-209ENST00000466862 H3BRJ5 948 aa6.34□□□□□ -1.39
GTF3C3-209ENST00000466862 ARMC10Q8N2F6 343 aa6.34□□□□□ -1.39
GTF3C3-209ENST00000466862 KLHL23Q8NBE8 558 aa6.34□□□□□ -1.39
GTF3C3-209ENST00000466862 UBASH3BQ8TF42 649 aa6.34□□□□□ -1.39
GTF3C3-209ENST00000466862 EREGO14944 169 aa6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 TNFRSF21O75509 655 aa6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 FSTP19883 344 aa6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 CES1P23141 567 aa6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 ZNF211Q13398 564 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 ALKBH2Q6NS38 261 aa6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 ACAD11Q709F0 780 aa6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 TMEM102Q8N9M5 508 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 SNX29Q8TEQ0 813 aa6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 ZKSCAN3Q9BRR0 538 aa6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 FOXD3Q9UJU5 478 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 RNF112Q9ULX5 631 aa6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 USTQ9Y2C2 406 aa6.33□□□□□ -1.4
GTF3C3-209ENST00000466862 PDE2AO00408 941 aaPredicted RBP6.32□□□□□ -1.4
GTF3C3-209ENST00000466862 DDX3YO15523 660 aaKnown RBP6.32□□□□□ -1.4
GTF3C3-209ENST00000466862 TRPA1O75762 1119 aa6.32□□□□□ -1.4
GTF3C3-209ENST00000466862 GLB1P16278 677 aa6.32□□□□□ -1.4
GTF3C3-209ENST00000466862 PIP4K2BP78356 416 aa6.32□□□□□ -1.4
GTF3C3-209ENST00000466862 SF3B2Q13435 895 aaKnown RBP6.32□□□□□ -1.4
GTF3C3-209ENST00000466862 ECM1Q16610 540 aa6.32□□□□□ -1.4
GTF3C3-209ENST00000466862 C8orf34Q49A92 452 aa6.32□□□□□ -1.4
GTF3C3-209ENST00000466862 WNT8BQ93098 351 aa6.32□□□□□ -1.4
GTF3C3-209ENST00000466862 FAM46AQ96IP4 442 aaKnown RBP6.32□□□□□ -1.4
GTF3C3-209ENST00000466862 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
GTF3C3-209ENST00000466862 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
GTF3C3-209ENST00000466862 HYAL3O43820 417 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 FAM13AO94988 1023 aa6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 PCSK2P16519 638 aa6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 CDC25BP30305 580 aa6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 UVSSAQ2YD98 709 aa6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 PEAR1Q5VY43 1037 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 HGSNATQ68CP4 663 aa6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 NBPF11Q86T75 865 aa6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 KRTAP19-1Q8IUB9 90 aa6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 KLHDC7BQ96G42 594 aa6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 BHLHE41Q9C0J9 482 aaPredicted RBP6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 SEC31BQ9NQW1 1179 aa6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 CCDC87Q9NVE4 849 aa6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 EGFL7Q9UHF1 273 aa6.31□□□□□ -1.4
GTF3C3-209ENST00000466862 VN1R5Q7Z5H4 357 aa6.3□□□□□ -1.4
GTF3C3-209ENST00000466862 NXPE3Q969Y0 559 aa6.3□□□□□ -1.4
GTF3C3-209ENST00000466862 OSGEPQ9NPF4 335 aa6.3□□□□□ -1.4
GTF3C3-209ENST00000466862 LATS2Q9NRM7 1088 aa6.3□□□□□ -1.4
GTF3C3-209ENST00000466862 PHACTR2O75167 634 aa6.29□□□□□ -1.4
GTF3C3-209ENST00000466862 USP5P45974 858 aa6.29□□□□□ -1.4
GTF3C3-209ENST00000466862 FKBP4Q02790 459 aaKnown RBP eCLIP6.29□□□□□ -1.4
GTF3C3-209ENST00000466862 EHHADHQ08426 723 aa6.29□□□□□ -1.4
GTF3C3-209ENST00000466862 FAM117BQ6P1L5 589 aa6.29□□□□□ -1.4
GTF3C3-209ENST00000466862 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.29□□□□□ -1.4
GTF3C3-209ENST00000466862 PMEPA1Q969W9 287 aa6.29□□□□□ -1.4
GTF3C3-209ENST00000466862 MYRFLQ96LU7 910 aa6.29□□□□□ -1.4
GTF3C3-209ENST00000466862 OSMRQ99650 979 aa6.29□□□□□ -1.4
GTF3C3-209ENST00000466862 CEP41Q9BYV8 373 aa6.29□□□□□ -1.4
GTF3C3-209ENST00000466862 ANO2Q9NQ90 1003 aa6.29□□□□□ -1.4
GTF3C3-209ENST00000466862 RAXQ9Y2V3 346 aa6.29□□□□□ -1.4
GTF3C3-209ENST00000466862 PREPP48147 710 aa6.28□□□□□ -1.4
GTF3C3-209ENST00000466862 CD97P48960 835 aa6.28□□□□□ -1.4
GTF3C3-209ENST00000466862 DUOXA2Q1HG44 320 aa6.28□□□□□ -1.4
GTF3C3-209ENST00000466862 C14orf37Q86TY3 774 aa6.28□□□□□ -1.4
GTF3C3-209ENST00000466862 NRSN2Q9GZP1 204 aa6.28□□□□□ -1.4
GTF3C3-209ENST00000466862 MTMR7Q9Y216 660 aa6.28□□□□□ -1.4
GTF3C3-209ENST00000466862 ICMTO60725 284 aa6.27□□□□□ -1.41
GTF3C3-209ENST00000466862 EDN3P14138 238 aa6.27□□□□□ -1.41
GTF3C3-209ENST00000466862 SERPINB4P48594 390 aa6.27□□□□□ -1.41
GTF3C3-209ENST00000466862 CABP4P57796 275 aa6.27□□□□□ -1.41
GTF3C3-209ENST00000466862 NLRP12P59046 1061 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms