RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 NBPF15Q8N660 670 aa18.13■□□□□ 0.49
ABCF3-206ENST00000466742 METTL22Q9BUU2 404 aaPredicted RBP18.13■□□□□ 0.49
ABCF3-206ENST00000466742 POLR3GO15318 223 aaPredicted RBP18.12■□□□□ 0.49
ABCF3-206ENST00000466742 CDC25BP30305 580 aa18.12■□□□□ 0.49
ABCF3-206ENST00000466742 MAGEA9P43362 315 aa18.12■□□□□ 0.49
ABCF3-206ENST00000466742 UTYO14607 1347 aa18.12■□□□□ 0.49
ABCF3-206ENST00000466742 PNMA6EA0A0J9YXQ4 647 aa18.12■□□□□ 0.49
ABCF3-206ENST00000466742 GSCP56915 257 aaPredicted RBP18.12■□□□□ 0.49
ABCF3-206ENST00000466742 NEXNQ0ZGT2 675 aa18.12■□□□□ 0.49
ABCF3-206ENST00000466742 ERCC6LQ2NKX8 1250 aa18.12■□□□□ 0.49
ABCF3-206ENST00000466742 CWF19L2Q2TBE0 894 aaKnown RBP18.12■□□□□ 0.49
ABCF3-206ENST00000466742 TOMM22Q9NS69 142 aa18.12■□□□□ 0.49
ABCF3-206ENST00000466742 USP27XA6NNY8 438 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 PIP4K2AP48426 406 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-206ENST00000466742 SWT1Q5T5J6 900 aaKnown RBP18.11■□□□□ 0.49
ABCF3-206ENST00000466742 EP400NLQ6ZTU2 488 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 PACS2Q86VP3 889 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 GPATCH11Q8N954 259 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 CEP120Q8N960 986 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 SSH3Q8TE77 659 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 FBXO41Q8TF61 875 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 IL17RAQ96F46 866 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 DRC1Q96MC2 740 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 C9orf78Q9NZ63 289 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-206ENST00000466742 EXOC6BQ9Y2D4 811 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 MRVI1Q9Y6F6 885 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 IGKV5-2P06315 115 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 ZSCAN22P10073 491 aaPredicted RBP18.11■□□□□ 0.49
ABCF3-206ENST00000466742 ANAPC15P60006 121 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 LRRC8AQ8IWT6 810 aa18.11■□□□□ 0.49
ABCF3-206ENST00000466742 LUZP1Q86V48 1076 aa18.1■□□□□ 0.49
ABCF3-206ENST00000466742 SUGP1Q8IWZ8 645 aaKnown RBP18.1■□□□□ 0.49
ABCF3-206ENST00000466742 MARCH10Q8NA82 808 aaPredicted RBP18.1■□□□□ 0.49
ABCF3-206ENST00000466742 PLBD2Q8NHP8 589 aa18.1■□□□□ 0.49
ABCF3-206ENST00000466742 TRIM5Q9C035 493 aa18.1■□□□□ 0.49
ABCF3-206ENST00000466742 DEF6Q9H4E7 631 aa18.1■□□□□ 0.49
ABCF3-206ENST00000466742 GRM8O00222 908 aa18.1■□□□□ 0.49
ABCF3-206ENST00000466742 A1BGP04217 495 aa18.1■□□□□ 0.49
ABCF3-206ENST00000466742 MTX1Q13505 466 aa18.1■□□□□ 0.49
ABCF3-206ENST00000466742 POLA2Q14181 598 aa18.1■□□□□ 0.49
ABCF3-206ENST00000466742 TMCO3Q6UWJ1 677 aa18.1■□□□□ 0.49
ABCF3-206ENST00000466742 FILIP1Q7Z7B0 1213 aa18.1■□□□□ 0.49
ABCF3-206ENST00000466742 REXO1L1PQ8IX06 675 aa18.1■□□□□ 0.49
ABCF3-206ENST00000466742 ARGLU1Q9NWB6 273 aaPredicted RBP18.1■□□□□ 0.49
ABCF3-206ENST00000466742 NEURL1BA8MQ27 555 aa18.09■□□□□ 0.49
ABCF3-206ENST00000466742 KIF1CO43896 1103 aaKnown RBP18.09■□□□□ 0.49
ABCF3-206ENST00000466742 CCDC93Q567U6 631 aa18.09■□□□□ 0.49
ABCF3-206ENST00000466742 CCDC91Q7Z6B0 441 aa18.09■□□□□ 0.49
ABCF3-206ENST00000466742 C16orf71Q8IYS4 520 aaPredicted RBP18.09■□□□□ 0.49
ABCF3-206ENST00000466742 TDRD7Q8NHU6 1098 aaKnown RBP18.09■□□□□ 0.49
ABCF3-206ENST00000466742 AK7Q96M32 723 aa18.09■□□□□ 0.49
ABCF3-206ENST00000466742 CLIP2Q9UDT6 1046 aa18.09■□□□□ 0.49
ABCF3-206ENST00000466742 CCDC144BQ3MJ40 725 aa18.09■□□□□ 0.49
ABCF3-206ENST00000466742 PPP1R42Q7Z4L9 355 aa18.09■□□□□ 0.49
ABCF3-206ENST00000466742 CCDC144CPQ8IYA2 1237 aa18.09■□□□□ 0.49
ABCF3-206ENST00000466742 EXOC4Q96A65 974 aa18.09■□□□□ 0.49
ABCF3-206ENST00000466742 ATP6V1DQ9Y5K8 247 aa18.09■□□□□ 0.49
ABCF3-206ENST00000466742 NPHP1O15259 732 aa18.08■□□□□ 0.48
ABCF3-206ENST00000466742 TYRO3Q06418 890 aa18.08■□□□□ 0.48
ABCF3-206ENST00000466742 MYD88Q99836 296 aa18.08■□□□□ 0.48
ABCF3-206ENST00000466742 CXorf56Q9H5V9 222 aa18.08■□□□□ 0.48
ABCF3-206ENST00000466742 CBX8Q9HC52 389 aa18.08■□□□□ 0.48
ABCF3-206ENST00000466742 STARD3NLO95772 234 aa18.07■□□□□ 0.48
ABCF3-206ENST00000466742 HSPA1LP34931 641 aa18.07■□□□□ 0.48
ABCF3-206ENST00000466742 SATB1Q01826 763 aa18.07■□□□□ 0.48
ABCF3-206ENST00000466742 SYTL4Q96C24 671 aaPredicted RBP18.07■□□□□ 0.48
ABCF3-206ENST00000466742 GCKRQ14397 625 aa18.07■□□□□ 0.48
ABCF3-206ENST00000466742 DNAJC10Q8IXB1 793 aa18.07■□□□□ 0.48
ABCF3-206ENST00000466742 ITGB4P16144 1822 aa18.06■□□□□ 0.48
ABCF3-206ENST00000466742 ACTN2P35609 894 aa18.06■□□□□ 0.48
ABCF3-206ENST00000466742 CCAR2Q8N163 923 aaKnown RBP18.06■□□□□ 0.48
ABCF3-206ENST00000466742 MNS1Q8NEH6 495 aa18.06■□□□□ 0.48
ABCF3-206ENST00000466742 USP21Q9UK80 565 aa18.06■□□□□ 0.48
ABCF3-206ENST00000466742 SRGAP3O43295 1099 aa18.06■□□□□ 0.48
ABCF3-206ENST00000466742 IVLP07476 585 aa18.06■□□□□ 0.48
ABCF3-206ENST00000466742 OAS2P29728 719 aaKnown RBP18.06■□□□□ 0.48
ABCF3-206ENST00000466742 MAP3K11Q16584 847 aa18.06■□□□□ 0.48
ABCF3-206ENST00000466742 FAM98CQ17RN3 349 aaKnown RBP18.06■□□□□ 0.48
ABCF3-206ENST00000466742 ARHGAP29Q52LW3 1261 aa18.06■□□□□ 0.48
ABCF3-206ENST00000466742 MED4Q9NPJ6 270 aa18.06■□□□□ 0.48
ABCF3-206ENST00000466742 FIBPO43427 364 aa18.05■□□□□ 0.48
ABCF3-206ENST00000466742 MCCP23508 829 aa18.05■□□□□ 0.48
ABCF3-206ENST00000466742 F13A1P00488 732 aa18.05■□□□□ 0.48
ABCF3-206ENST00000466742 TTLL7Q6ZT98 887 aa18.05■□□□□ 0.48
ABCF3-206ENST00000466742 SLC4A9Q96Q91 983 aa18.05■□□□□ 0.48
ABCF3-206ENST00000466742 LRRCC1Q9C099 1032 aa18.05■□□□□ 0.48
ABCF3-206ENST00000466742 RAB11FIP3O75154 756 aa18.04■□□□□ 0.48
ABCF3-206ENST00000466742 SKILP12757 684 aa18.04■□□□□ 0.48
ABCF3-206ENST00000466742 SART3Q15020 963 aaKnown RBP18.04■□□□□ 0.48
ABCF3-206ENST00000466742 OTUD7AQ8TE49 926 aaPredicted RBP18.04■□□□□ 0.48
ABCF3-206ENST00000466742 ZCCHC17Q9NP64 241 aaKnown RBP18.04■□□□□ 0.48
ABCF3-206ENST00000466742 ORC3Q9UBD5 711 aaPredicted RBP18.04■□□□□ 0.48
ABCF3-206ENST00000466742 APBB1O00213 710 aa18.04■□□□□ 0.48
ABCF3-206ENST00000466742 TPRNQ4KMQ1 711 aa18.04■□□□□ 0.48
ABCF3-206ENST00000466742 EGFL6Q8IUX8 553 aa18.04■□□□□ 0.48
ABCF3-206ENST00000466742 KAZALD1Q96I82 304 aa18.04■□□□□ 0.48
ABCF3-206ENST00000466742 SUCLG2Q96I99 432 aa18.04■□□□□ 0.48
ABCF3-206ENST00000466742 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.04■□□□□ 0.48
ABCF3-206ENST00000466742 STX6O43752 255 aa18.03■□□□□ 0.48
ABCF3-206ENST00000466742 MCTP2Q6DN12 878 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms