RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 CLEC11AQ9Y240 323 aa14.96□□□□□ -0.01
SHROOM3-202ENST00000466541 SCN4AP35499 1836 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 PDE8BO95263 885 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 EPS15P42566 896 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 GYG1P46976 350 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 ATP8B2P98198 1209 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 UBE4AQ14139 1066 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 PDE3AQ14432 1141 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 ZNF804AQ7Z570 1209 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 VPS37DQ86XT2 251 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 L3MBTL3Q96JM7 780 aaPredicted RBP14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 MXD3Q9BW11 206 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 COA1Q9GZY4 146 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 CEP126Q9P2H0 1117 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 JAG2Q9Y219 1238 aa14.95□□□□□ -0.02
SHROOM3-202ENST00000466541 SHTN1A0MZ66 631 aa14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 CIAO1O76071 339 aa14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 EPHX2P34913 555 aa14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 IL15P40933 162 aaPredicted RBP14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 SCNN1DP51172 638 aa14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 G3BP1Q13283 466 aaKnown RBP eCLIP14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 OS9Q13438 667 aaPredicted RBP14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 MTX1Q13505 466 aa14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 PODNQ7Z5L7 613 aa14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 BCL11AQ9H165 835 aa14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 TAF1DQ9H5J8 278 aaPredicted RBP14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 COPRSQ9NQ92 184 aa14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 IQSEC3Q9UPP2 1182 aaPredicted RBP14.94□□□□□ -0.02
SHROOM3-202ENST00000466541 USP17L3A6NCW0 530 aa14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 USP17L4A6NCW7 530 aa14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 FRAT2O75474 233 aaPredicted RBP14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 POTEIP0CG38 1075 aa14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 POTEJP0CG39 1038 aa14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 GTF2IP78347 998 aa14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 PUM3Q15397 648 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 RBM26Q5T8P6 1007 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 TTLL5Q6EMB2 1281 aa14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 USP17L1Q7RTZ2 530 aa14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 VGLL2Q8N8G2 317 aa14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 CD209Q9NNX6 404 aa14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 CNOT7Q9UIV1 285 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-202ENST00000466541 SURF6O75683 361 aaKnown RBP14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 TOMM70O94826 608 aa14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 VIL1P09327 827 aaKnown RBP14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 IFIT1P09914 478 aaKnown RBP14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 SLC5A1P13866 664 aa14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 HIBADHP31937 336 aaKnown RBP14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 C1QTNF8P60827 252 aa14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 TFCP2Q12800 502 aa14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 CAVIN4Q5BKX8 364 aa14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 CEP85Q6P2H3 762 aa14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 MICALL2Q8IY33 904 aa14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 CHMP4BQ9H444 224 aaKnown RBP14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 ZBTB40Q9NUA8 1239 aa14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 GPRC5DQ9NZD1 345 aa14.92□□□□□ -0.02
SHROOM3-202ENST00000466541 H7C1D1 291 aa14.91□□□□□ -0.02
SHROOM3-202ENST00000466541 BCAMP50895 628 aa14.91□□□□□ -0.02
SHROOM3-202ENST00000466541 CHAF1AQ13111 956 aaPredicted RBP14.91□□□□□ -0.02
SHROOM3-202ENST00000466541 ATP2B3Q16720 1220 aa14.91□□□□□ -0.02
SHROOM3-202ENST00000466541 RSBN1LQ6PCB5 846 aaPredicted RBP14.91□□□□□ -0.02
SHROOM3-202ENST00000466541 SSH3Q8TE77 659 aa14.91□□□□□ -0.02
SHROOM3-202ENST00000466541 FAM84BQ96KN1 310 aaPredicted RBP14.91□□□□□ -0.02
SHROOM3-202ENST00000466541 NEUROD6Q96NK8 337 aa14.91□□□□□ -0.02
SHROOM3-202ENST00000466541 FBXO3Q9UK99 471 aa14.91□□□□□ -0.02
SHROOM3-202ENST00000466541 PSME4Q14997 1843 aa14.91□□□□□ -0.02
SHROOM3-202ENST00000466541 IRS2Q9Y4H2 1338 aa14.91□□□□□ -0.02
SHROOM3-202ENST00000466541 APBB1O00213 710 aa14.9□□□□□ -0.02
SHROOM3-202ENST00000466541 TIMM10P62072 90 aa14.9□□□□□ -0.02
SHROOM3-202ENST00000466541 POLA2Q14181 598 aa14.9□□□□□ -0.02
SHROOM3-202ENST00000466541 TBC1D10BQ4KMP7 808 aaPredicted RBP14.9□□□□□ -0.02
SHROOM3-202ENST00000466541 C15orf52Q6ZUT6 534 aaKnown RBP14.9□□□□□ -0.02
SHROOM3-202ENST00000466541 SAMD7Q7Z3H4 446 aa14.9□□□□□ -0.02
SHROOM3-202ENST00000466541 RBM46Q8TBY0 533 aaKnown RBP14.9□□□□□ -0.02
SHROOM3-202ENST00000466541 LPIN2Q92539 896 aa14.9□□□□□ -0.02
SHROOM3-202ENST00000466541 SUPT16HQ9Y5B9 1047 aaKnown RBP14.9□□□□□ -0.02
SHROOM3-202ENST00000466541 F8W031 263 aaPredicted RBP14.89□□□□□ -0.03
SHROOM3-202ENST00000466541 IL1R1P14778 569 aa14.89□□□□□ -0.03
SHROOM3-202ENST00000466541 FGFR2P21802 821 aa14.89□□□□□ -0.03
SHROOM3-202ENST00000466541 DACT2Q5SW24 774 aa14.89□□□□□ -0.03
SHROOM3-202ENST00000466541 PNMA8AQ86V59 439 aaPredicted RBP14.89□□□□□ -0.03
SHROOM3-202ENST00000466541 SMC1BQ8NDV3 1235 aa14.89□□□□□ -0.03
SHROOM3-202ENST00000466541 CRBNQ96SW2 442 aa14.89□□□□□ -0.03
SHROOM3-202ENST00000466541 ADARB2Q9NS39 739 aaKnown RBP14.89□□□□□ -0.03
SHROOM3-202ENST00000466541 EXOC6BQ9Y2D4 811 aa14.89□□□□□ -0.03
SHROOM3-202ENST00000466541 RPS12P25398 132 aaKnown RBP14.88□□□□□ -0.03
SHROOM3-202ENST00000466541 ADORA1P30542 326 aa14.88□□□□□ -0.03
SHROOM3-202ENST00000466541 STRIP1Q5VSL9 837 aa14.88□□□□□ -0.03
SHROOM3-202ENST00000466541 MAP1SQ66K74 1059 aaPredicted RBP14.88□□□□□ -0.03
SHROOM3-202ENST00000466541 FBXO33Q7Z6M2 555 aa14.88□□□□□ -0.03
SHROOM3-202ENST00000466541 LDHDQ86WU2 507 aa14.88□□□□□ -0.03
SHROOM3-202ENST00000466541 KIAA0825Q8IV33 1275 aa14.88□□□□□ -0.03
SHROOM3-202ENST00000466541 TRPM4Q8TD43 1214 aa14.88□□□□□ -0.03
SHROOM3-202ENST00000466541 DPF2Q92785 391 aa14.88□□□□□ -0.03
SHROOM3-202ENST00000466541 AKAP2Q9Y2D5 859 aa14.88□□□□□ -0.03
SHROOM3-202ENST00000466541 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.88□□□□□ -0.03
SHROOM3-202ENST00000466541 MYH13Q9UKX3 1938 aa14.88□□□□□ -0.03
SHROOM3-202ENST00000466541 SASH1O94885 1247 aa14.87□□□□□ -0.03
SHROOM3-202ENST00000466541 EGFRP00533 1210 aa14.87□□□□□ -0.03
SHROOM3-202ENST00000466541 USP17L8P0C7I0 530 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms