RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 MPNDQ8N594 471 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 OTUD7AQ8TE49 926 aaPredicted RBP13.72□□□□□ -0.21
VCP-204ENST00000466100 LPIN2Q92539 896 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 ANKIB1Q9P2G1 1089 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 GGA1Q9UJY5 639 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 NSFL1CQ9UNZ2 370 aaKnown RBP13.72□□□□□ -0.21
VCP-204ENST00000466100 BCS1LQ9Y276 419 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 AKAP2Q9Y2D5 859 aa13.72□□□□□ -0.21
VCP-204ENST00000466100 NFKBIEO00221 500 aa13.71□□□□□ -0.21
VCP-204ENST00000466100 UFL1O94874 794 aa13.71□□□□□ -0.21
VCP-204ENST00000466100 DPP8Q6V1X1 898 aaPredicted RBP13.71□□□□□ -0.21
VCP-204ENST00000466100 AACSQ86V21 672 aa13.71□□□□□ -0.21
VCP-204ENST00000466100 SKAP1Q86WV1 359 aa13.71□□□□□ -0.21
VCP-204ENST00000466100 C16orf71Q8IYS4 520 aaPredicted RBP13.71□□□□□ -0.21
VCP-204ENST00000466100 RTKN2Q8IZC4 609 aa13.71□□□□□ -0.21
VCP-204ENST00000466100 PSMD1Q99460 953 aa13.71□□□□□ -0.21
VCP-204ENST00000466100 DBNDD2Q9BQY9 259 aa13.71□□□□□ -0.21
VCP-204ENST00000466100 CCDC8Q9H0W5 538 aaPredicted RBP13.71□□□□□ -0.21
VCP-204ENST00000466100 MYO5AQ9Y4I1 1855 aaKnown RBP13.71□□□□□ -0.21
VCP-204ENST00000466100 AK9Q5TCS8 1911 aa13.7□□□□□ -0.22
VCP-204ENST00000466100 LTBP3Q9NS15 1303 aa13.7□□□□□ -0.22
VCP-204ENST00000466100 SLC5A1P13866 664 aa13.7□□□□□ -0.22
VCP-204ENST00000466100 YBX3P16989 372 aaKnown RBP eCLIP13.7□□□□□ -0.22
VCP-204ENST00000466100 TXNRD3Q86VQ6 643 aa13.7□□□□□ -0.22
VCP-204ENST00000466100 XAGE2Q96GT9 111 aa13.7□□□□□ -0.22
VCP-204ENST00000466100 GPR101Q96P66 508 aaPredicted RBP13.7□□□□□ -0.22
VCP-204ENST00000466100 DOCK2Q92608 1830 aa13.69□□□□□ -0.22
VCP-204ENST00000466100 ZBTB22O15209 634 aa13.69□□□□□ -0.22
VCP-204ENST00000466100 IFIT1P09914 478 aaKnown RBP13.69□□□□□ -0.22
VCP-204ENST00000466100 KCNJ4P48050 445 aa13.69□□□□□ -0.22
VCP-204ENST00000466100 FKBP4Q02790 459 aaKnown RBP eCLIP13.69□□□□□ -0.22
VCP-204ENST00000466100 TMX4Q9H1E5 349 aaPredicted RBP13.69□□□□□ -0.22
VCP-204ENST00000466100 STAP2Q9UGK3 403 aa13.69□□□□□ -0.22
VCP-204ENST00000466100 TIAM2Q8IVF5 1701 aa13.69□□□□□ -0.22
VCP-204ENST00000466100 MYH7P12883 1935 aa13.68□□□□□ -0.22
VCP-204ENST00000466100 COL1A1P02452 1464 aaPredicted RBP13.68□□□□□ -0.22
VCP-204ENST00000466100 C6orf229H3BNL8 230 aa13.68□□□□□ -0.22
VCP-204ENST00000466100 IFIT2P09913 472 aaKnown RBP13.68□□□□□ -0.22
VCP-204ENST00000466100 FBXO33Q7Z6M2 555 aa13.68□□□□□ -0.22
VCP-204ENST00000466100 PLEKHM2Q8IWE5 1019 aa13.68□□□□□ -0.22
VCP-204ENST00000466100 FAM84BQ96KN1 310 aaPredicted RBP13.68□□□□□ -0.22
VCP-204ENST00000466100 NEUROD6Q96NK8 337 aa13.68□□□□□ -0.22
VCP-204ENST00000466100 MX1P20591 662 aa13.67□□□□□ -0.22
VCP-204ENST00000466100 PHKA1P46020 1223 aa13.67□□□□□ -0.22
VCP-204ENST00000466100 GYG1P46976 350 aa13.67□□□□□ -0.22
VCP-204ENST00000466100 SUPT20HQ8NEM7 779 aa13.67□□□□□ -0.22
VCP-204ENST00000466100 TAOK3Q9H2K8 898 aa13.67□□□□□ -0.22
VCP-204ENST00000466100 OSBPL3Q9H4L5 887 aa13.67□□□□□ -0.22
VCP-204ENST00000466100 ZBTB47Q9UFB7 747 aaPredicted RBP13.67□□□□□ -0.22
VCP-204ENST00000466100 AOX1Q06278 1338 aa13.66□□□□□ -0.22
VCP-204ENST00000466100 TTC41PQ6P2S7 1318 aa13.66□□□□□ -0.22
VCP-204ENST00000466100 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
VCP-204ENST00000466100 BCAMP50895 628 aa13.66□□□□□ -0.22
VCP-204ENST00000466100 PRELPP51888 382 aa13.66□□□□□ -0.22
VCP-204ENST00000466100 PDE1AP54750 535 aa13.66□□□□□ -0.22
VCP-204ENST00000466100 RASSF7Q02833 373 aa13.66□□□□□ -0.22
VCP-204ENST00000466100 KIAA2012Q0VF49 1180 aa13.66□□□□□ -0.22
VCP-204ENST00000466100 TSHZ3Q63HK5 1081 aa13.66□□□□□ -0.22
VCP-204ENST00000466100 CCDC102BQ68D86 513 aa13.66□□□□□ -0.22
VCP-204ENST00000466100 PI4K2BQ8TCG2 481 aa13.66□□□□□ -0.22
VCP-204ENST00000466100 ZNF512BQ96KM6 892 aaPredicted RBP13.66□□□□□ -0.22
VCP-204ENST00000466100 EYA3Q99504 573 aa13.66□□□□□ -0.22
VCP-204ENST00000466100 VPS33BQ9H267 617 aa13.66□□□□□ -0.22
VCP-204ENST00000466100 ATP5JP18859 108 aa13.65□□□□□ -0.22
VCP-204ENST00000466100 AOC3Q16853 763 aa13.65□□□□□ -0.22
VCP-204ENST00000466100 WASHC4Q2M389 1173 aa13.65□□□□□ -0.22
VCP-204ENST00000466100 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.65□□□□□ -0.22
VCP-204ENST00000466100 BCL11AQ9H165 835 aa13.65□□□□□ -0.22
VCP-204ENST00000466100 ZNF277Q9NRM2 450 aaPredicted RBP13.65□□□□□ -0.22
VCP-204ENST00000466100 ECHDC1Q9NTX5 307 aa13.65□□□□□ -0.22
VCP-204ENST00000466100 MAST2Q6P0Q8 1798 aa13.65□□□□□ -0.22
VCP-204ENST00000466100 RIMBP2O15034 1052 aa13.64□□□□□ -0.23
VCP-204ENST00000466100 IL1R1P14778 569 aa13.64□□□□□ -0.23
VCP-204ENST00000466100 HIBADHP31937 336 aaKnown RBP13.64□□□□□ -0.23
VCP-204ENST00000466100 IARSP41252 1262 aaKnown RBP13.64□□□□□ -0.23
VCP-204ENST00000466100 SCARF1Q14162 830 aa13.64□□□□□ -0.23
VCP-204ENST00000466100 CAVIN4Q5BKX8 364 aa13.64□□□□□ -0.23
VCP-204ENST00000466100 ZNF804AQ7Z570 1209 aa13.64□□□□□ -0.23
VCP-204ENST00000466100 TDRD7Q8NHU6 1098 aaKnown RBP13.64□□□□□ -0.23
VCP-204ENST00000466100 ZC3H12CQ9C0D7 883 aaKnown RBP13.64□□□□□ -0.23
VCP-204ENST00000466100 CD209Q9NNX6 404 aa13.64□□□□□ -0.23
VCP-204ENST00000466100 PDS5AQ29RF7 1337 aaKnown RBP13.64□□□□□ -0.23
VCP-204ENST00000466100 PPIP5K2O43314 1243 aa13.63□□□□□ -0.23
VCP-204ENST00000466100 MCAMP43121 646 aa13.63□□□□□ -0.23
VCP-204ENST00000466100 RASGRF1Q13972 1273 aa13.63□□□□□ -0.23
VCP-204ENST00000466100 GORABQ5T7V8 394 aa13.63□□□□□ -0.23
VCP-204ENST00000466100 GPATCH3Q96I76 525 aa13.63□□□□□ -0.23
VCP-204ENST00000466100 COA1Q9GZY4 146 aa13.63□□□□□ -0.23
VCP-204ENST00000466100 SEMA3EO15041 775 aa13.62□□□□□ -0.23
VCP-204ENST00000466100 GLRX3O76003 335 aaKnown RBP13.62□□□□□ -0.23
VCP-204ENST00000466100 UQCRFS1P1P0C7P4 283 aa13.62□□□□□ -0.23
VCP-204ENST00000466100 CCDC158Q5M9N0 1113 aa13.62□□□□□ -0.23
VCP-204ENST00000466100 TTC39AQ5SRH9 613 aa13.62□□□□□ -0.23
VCP-204ENST00000466100 PI16Q6UXB8 463 aa13.62□□□□□ -0.23
VCP-204ENST00000466100 ARHGAP27Q6ZUM4 889 aa13.62□□□□□ -0.23
VCP-204ENST00000466100 PELP1Q8IZL8 1130 aaKnown RBP13.62□□□□□ -0.23
VCP-204ENST00000466100 HAUS7Q99871 368 aa13.62□□□□□ -0.23
VCP-204ENST00000466100 HMG20BQ9P0W2 317 aa13.62□□□□□ -0.23
VCP-204ENST00000466100 YDJCA8MPS7 323 aa13.61□□□□□ -0.23
VCP-204ENST00000466100 ECE2O60344 883 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms