RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 USP17L19D6RCP7 530 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 USP17L20D6RJB6 530 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 USP17L24Q0WX57 530 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 TTC39BQ5VTQ0 682 aaPredicted RBP8.49□□□□□ -1.05
LRCH3-211ENST00000466054 TP53INP2Q8IXH6 220 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 FBXL6Q8N531 539 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 SEC31BQ9NQW1 1179 aa8.49□□□□□ -1.05
LRCH3-211ENST00000466054 UBAP1LF5GYI3 381 aa8.48□□□□□ -1.05
LRCH3-211ENST00000466054 DDX3YO15523 660 aaKnown RBP8.48□□□□□ -1.05
LRCH3-211ENST00000466054 C8AP07357 584 aa8.48□□□□□ -1.05
LRCH3-211ENST00000466054 PTPRAP18433 802 aa8.48□□□□□ -1.05
LRCH3-211ENST00000466054 RXRBP28702 533 aa8.48□□□□□ -1.05
LRCH3-211ENST00000466054 HOXA10P31260 410 aaPredicted RBP8.48□□□□□ -1.05
LRCH3-211ENST00000466054 CABP4P57796 275 aa8.48□□□□□ -1.05
LRCH3-211ENST00000466054 FBXL18Q96ME1 805 aa8.48□□□□□ -1.05
LRCH3-211ENST00000466054 OSBPL1AQ9BXW6 950 aa8.48□□□□□ -1.05
LRCH3-211ENST00000466054 KRTAP4-9Q9BYQ8 210 aa8.48□□□□□ -1.05
LRCH3-211ENST00000466054 RNF208Q9H0X6 261 aa8.48□□□□□ -1.05
LRCH3-211ENST00000466054 WEE1P30291 646 aa8.47□□□□□ -1.05
LRCH3-211ENST00000466054 PREPP48147 710 aa8.47□□□□□ -1.05
LRCH3-211ENST00000466054 OR13H1Q8NG92 308 aa8.47□□□□□ -1.05
LRCH3-211ENST00000466054 PIK3R5Q8WYR1 880 aa8.47□□□□□ -1.05
LRCH3-211ENST00000466054 FAM13BQ9NYF5 915 aa8.47□□□□□ -1.05
LRCH3-211ENST00000466054 LRFN2Q9ULH4 789 aa8.47□□□□□ -1.05
LRCH3-211ENST00000466054 FAM196BA6NMK8 535 aa8.46□□□□□ -1.06
LRCH3-211ENST00000466054 SUPT5HO00267 1087 aaKnown RBP8.46□□□□□ -1.06
LRCH3-211ENST00000466054 POU5F2Q8N7G0 328 aa8.46□□□□□ -1.06
LRCH3-211ENST00000466054 FOXD4L4Q8WXT5 416 aaPredicted RBP8.46□□□□□ -1.06
LRCH3-211ENST00000466054 RUSC1Q9BVN2 902 aa8.46□□□□□ -1.06
LRCH3-211ENST00000466054 RASSF4Q9H2L5 321 aa8.46□□□□□ -1.06
LRCH3-211ENST00000466054 VRTNQ9H8Y1 702 aa8.46□□□□□ -1.06
LRCH3-211ENST00000466054 VSIG10LQ86VR7 867 aa8.45□□□□□ -1.06
LRCH3-211ENST00000466054 NCAPG2Q86XI2 1143 aa8.45□□□□□ -1.06
LRCH3-211ENST00000466054 GLMNQ92990 594 aa8.45□□□□□ -1.06
LRCH3-211ENST00000466054 KLHDC7BQ96G42 594 aa8.45□□□□□ -1.06
LRCH3-211ENST00000466054 SH2B1Q9NRF2 756 aaPredicted RBP8.45□□□□□ -1.06
LRCH3-211ENST00000466054 FNDC3AQ9Y2H6 1198 aaKnown RBP8.45□□□□□ -1.06
LRCH3-211ENST00000466054 EPHA1P21709 976 aa8.44□□□□□ -1.06
LRCH3-211ENST00000466054 MAP4P27816 1152 aaKnown RBP8.44□□□□□ -1.06
LRCH3-211ENST00000466054 NLRP12P59046 1061 aa8.44□□□□□ -1.06
LRCH3-211ENST00000466054 ZNF777Q9ULD5 760 aaPredicted RBP8.44□□□□□ -1.06
LRCH3-211ENST00000466054 ADAM11O75078 769 aa8.43□□□□□ -1.06
LRCH3-211ENST00000466054 FOSL1P15407 271 aa8.43□□□□□ -1.06
LRCH3-211ENST00000466054 JUNBP17275 347 aaPredicted RBP8.43□□□□□ -1.06
LRCH3-211ENST00000466054 BRD2P25440 801 aaKnown RBP8.43□□□□□ -1.06
LRCH3-211ENST00000466054 PIP4K2BP78356 416 aa8.43□□□□□ -1.06
LRCH3-211ENST00000466054 TRIP4Q15650 581 aaPredicted RBP8.43□□□□□ -1.06
LRCH3-211ENST00000466054 CPSF6Q16630 551 aaKnown RBP eCLIP8.43□□□□□ -1.06
LRCH3-211ENST00000466054 COX20Q5RI15 118 aa8.43□□□□□ -1.06
LRCH3-211ENST00000466054 COL13A1Q5TAT6 717 aaPredicted RBP8.43□□□□□ -1.06
LRCH3-211ENST00000466054 CCDC39Q9UFE4 941 aa8.43□□□□□ -1.06
LRCH3-211ENST00000466054 H3BRJ5 948 aa8.42□□□□□ -1.06
LRCH3-211ENST00000466054 PBX4Q9BYU1 374 aa8.42□□□□□ -1.06
LRCH3-211ENST00000466054 ARL4DP49703 201 aa8.41□□□□□ -1.06
LRCH3-211ENST00000466054 KANK4Q5T7N3 995 aaPredicted RBP8.41□□□□□ -1.06
LRCH3-211ENST00000466054 FAM200AQ8TCP9 573 aa8.41□□□□□ -1.06
LRCH3-211ENST00000466054 SLC7A3Q8WY07 619 aa8.41□□□□□ -1.06
LRCH3-211ENST00000466054 WNT8BQ93098 351 aa8.41□□□□□ -1.06
LRCH3-211ENST00000466054 METTL22Q9BUU2 404 aaPredicted RBP8.41□□□□□ -1.06
LRCH3-211ENST00000466054 ARID3CA6NKF2 412 aa8.4□□□□□ -1.06
LRCH3-211ENST00000466054 PAOXQ6QHF9 649 aa8.4□□□□□ -1.06
LRCH3-211ENST00000466054 ETFBKMTQ8IXQ9 262 aa8.4□□□□□ -1.06
LRCH3-211ENST00000466054 AGBL5Q8NDL9 886 aa8.4□□□□□ -1.06
LRCH3-211ENST00000466054 CALR3Q96L12 384 aaKnown RBP8.4□□□□□ -1.06
LRCH3-211ENST00000466054 F13BP05160 661 aa8.39□□□□□ -1.07
LRCH3-211ENST00000466054 NFKBIBQ15653 356 aa8.39□□□□□ -1.07
LRCH3-211ENST00000466054 MSMPQ1L6U9 139 aa8.39□□□□□ -1.07
LRCH3-211ENST00000466054 SGO2Q562F6 1265 aa8.39□□□□□ -1.07
LRCH3-211ENST00000466054 NUTM2GQ5VZR2 741 aa8.39□□□□□ -1.07
LRCH3-211ENST00000466054 C12orf50Q8NA57 414 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-211ENST00000466054 FLCNQ8NFG4 579 aa8.39□□□□□ -1.07
LRCH3-211ENST00000466054 PPP1R12CQ9BZL4 782 aa8.39□□□□□ -1.07
LRCH3-211ENST00000466054 C1orf115Q9H7X2 142 aa8.39□□□□□ -1.07
LRCH3-211ENST00000466054 OSGEPQ9NPF4 335 aa8.39□□□□□ -1.07
LRCH3-211ENST00000466054 TM4SF5O14894 197 aa8.38□□□□□ -1.07
LRCH3-211ENST00000466054 CYP26A1O43174 497 aa8.38□□□□□ -1.07
LRCH3-211ENST00000466054 LMOD1P29536 600 aaPredicted RBP8.38□□□□□ -1.07
LRCH3-211ENST00000466054 CBLL1Q75N03 491 aa8.38□□□□□ -1.07
LRCH3-211ENST00000466054 BSDC1Q9NW68 430 aaPredicted RBP8.38□□□□□ -1.07
LRCH3-211ENST00000466054 ABI2Q9NYB9 513 aaPredicted RBP8.38□□□□□ -1.07
LRCH3-211ENST00000466054 SERPINA10Q9UK55 444 aa8.38□□□□□ -1.07
LRCH3-211ENST00000466054 FAM95CA0A1B0GW59 222 aa8.37□□□□□ -1.07
LRCH3-211ENST00000466054 PRNPP04156 253 aa8.37□□□□□ -1.07
LRCH3-211ENST00000466054 USP11P51784 963 aa8.37□□□□□ -1.07
LRCH3-211ENST00000466054 FKBP5Q13451 457 aaPredicted RBP8.37□□□□□ -1.07
LRCH3-211ENST00000466054 C16orf46Q6P387 395 aa8.37□□□□□ -1.07
LRCH3-211ENST00000466054 POP1Q99575 1024 aaKnown RBP8.37□□□□□ -1.07
LRCH3-211ENST00000466054 ADAM19Q9H013 955 aa8.37□□□□□ -1.07
LRCH3-211ENST00000466054 KIF4AO95239 1232 aa8.36□□□□□ -1.07
LRCH3-211ENST00000466054 ITGB5P18084 799 aa8.36□□□□□ -1.07
LRCH3-211ENST00000466054 COL26A1Q96A83 441 aa8.36□□□□□ -1.07
LRCH3-211ENST00000466054 CCDC97Q96F63 343 aaPredicted RBP8.36□□□□□ -1.07
LRCH3-211ENST00000466054 ARXQ96QS3 562 aa8.36□□□□□ -1.07
LRCH3-211ENST00000466054 KRTAP4-2Q9BYR5 136 aa8.36□□□□□ -1.07
LRCH3-211ENST00000466054 PKN1Q16512 942 aa8.35□□□□□ -1.07
LRCH3-211ENST00000466054 ADAMTSL4Q6UY14 1074 aa8.35□□□□□ -1.07
LRCH3-211ENST00000466054 CYP4F12Q9HCS2 524 aa8.35□□□□□ -1.07
LRCH3-211ENST00000466054 C19orf57Q0VDD7 668 aa8.34□□□□□ -1.07
LRCH3-211ENST00000466054 CCDC82Q8N4S0 544 aa8.34□□□□□ -1.07
LRCH3-211ENST00000466054 CEP120Q8N960 986 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms