RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 KDM2BQ8NHM5 1336 aa22.81■■□□□ 1.24
HOXA9-203ENST00000465941 ZNF541Q9H0D2 1346 aa22.81■■□□□ 1.24
HOXA9-203ENST00000465941 HMMRO75330 724 aa22.8■■□□□ 1.24
HOXA9-203ENST00000465941 SURF6O75683 361 aaKnown RBP22.8■■□□□ 1.24
HOXA9-203ENST00000465941 CXCL9Q07325 125 aa22.8■■□□□ 1.24
HOXA9-203ENST00000465941 AAMPQ13685 434 aa22.8■■□□□ 1.24
HOXA9-203ENST00000465941 A0A1B0GUL6 1792 aa22.79■■□□□ 1.24
HOXA9-203ENST00000465941 GPC2Q8N158 579 aa22.79■■□□□ 1.24
HOXA9-203ENST00000465941 DDNO94850 711 aaPredicted RBP22.78■■□□□ 1.24
HOXA9-203ENST00000465941 LPIN2Q92539 896 aa22.78■■□□□ 1.24
HOXA9-203ENST00000465941 SASH1O94885 1247 aa22.77■■□□□ 1.24
HOXA9-203ENST00000465941 IFIT1P09914 478 aaKnown RBP22.77■■□□□ 1.24
HOXA9-203ENST00000465941 TFCP2Q12800 502 aa22.77■■□□□ 1.24
HOXA9-203ENST00000465941 TNIP1Q15025 636 aa22.77■■□□□ 1.24
HOXA9-203ENST00000465941 CIAPIN1Q6FI81 312 aa22.77■■□□□ 1.24
HOXA9-203ENST00000465941 ZNF526Q8TF50 670 aaPredicted RBP22.77■■□□□ 1.24
HOXA9-203ENST00000465941 KCNQ5Q9NR82 932 aa22.77■■□□□ 1.24
HOXA9-203ENST00000465941 RAD17O75943 681 aa22.76■■□□□ 1.23
HOXA9-203ENST00000465941 ZNF804AQ7Z570 1209 aa22.76■■□□□ 1.23
HOXA9-203ENST00000465941 L3MBTL3Q96JM7 780 aaPredicted RBP22.76■■□□□ 1.23
HOXA9-203ENST00000465941 FAM84BQ96KN1 310 aaPredicted RBP22.76■■□□□ 1.23
HOXA9-203ENST00000465941 GPBP1L1Q9HC44 474 aaPredicted RBP22.76■■□□□ 1.23
HOXA9-203ENST00000465941 CD209Q9NNX6 404 aa22.76■■□□□ 1.23
HOXA9-203ENST00000465941 AKAP2Q9Y2D5 859 aa22.76■■□□□ 1.23
HOXA9-203ENST00000465941 SLC5A1P13866 664 aa22.75■■□□□ 1.23
HOXA9-203ENST00000465941 IL1R1P14778 569 aa22.75■■□□□ 1.23
HOXA9-203ENST00000465941 HIBADHP31937 336 aaKnown RBP22.75■■□□□ 1.23
HOXA9-203ENST00000465941 ATP2B3Q16720 1220 aa22.75■■□□□ 1.23
HOXA9-203ENST00000465941 HSP90AB4PQ58FF6 505 aa22.75■■□□□ 1.23
HOXA9-203ENST00000465941 FBXO33Q7Z6M2 555 aa22.75■■□□□ 1.23
HOXA9-203ENST00000465941 PCDHB15Q9Y5E8 787 aa22.75■■□□□ 1.23
HOXA9-203ENST00000465941 GJA3Q9Y6H8 435 aa22.75■■□□□ 1.23
HOXA9-203ENST00000465941 GYG1P46976 350 aa22.74■■□□□ 1.23
HOXA9-203ENST00000465941 OS9Q13438 667 aaPredicted RBP22.74■■□□□ 1.23
HOXA9-203ENST00000465941 CAVIN4Q5BKX8 364 aa22.74■■□□□ 1.23
HOXA9-203ENST00000465941 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.74■■□□□ 1.23
HOXA9-203ENST00000465941 PSMD14O00487 310 aa22.73■■□□□ 1.23
HOXA9-203ENST00000465941 VIL1P09327 827 aaKnown RBP22.73■■□□□ 1.23
HOXA9-203ENST00000465941 ERC1Q8IUD2 1116 aa22.73■■□□□ 1.23
HOXA9-203ENST00000465941 EXOC6Q8TAG9 804 aa22.73■■□□□ 1.23
HOXA9-203ENST00000465941 GPR108Q9NPR9 543 aa22.73■■□□□ 1.23
HOXA9-203ENST00000465941 USP17L3A6NCW0 530 aa22.72■■□□□ 1.23
HOXA9-203ENST00000465941 USP17L4A6NCW7 530 aa22.72■■□□□ 1.23
HOXA9-203ENST00000465941 POTECB2RU33 542 aa22.72■■□□□ 1.23
HOXA9-203ENST00000465941 TIMM10P62072 90 aa22.72■■□□□ 1.23
HOXA9-203ENST00000465941 USP17L1Q7RTZ2 530 aa22.72■■□□□ 1.23
HOXA9-203ENST00000465941 TDRD7Q8NHU6 1098 aaKnown RBP22.72■■□□□ 1.23
HOXA9-203ENST00000465941 RRAGCQ9HB90 399 aa22.72■■□□□ 1.23
HOXA9-203ENST00000465941 NMRK2Q9NPI5 230 aa22.72■■□□□ 1.23
HOXA9-203ENST00000465941 EXOC6BQ9Y2D4 811 aa22.72■■□□□ 1.23
HOXA9-203ENST00000465941 A0A1B0GUL7 405 aa22.71■■□□□ 1.23
HOXA9-203ENST00000465941 VEGFAP15692 232 aaPredicted RBP22.71■■□□□ 1.23
HOXA9-203ENST00000465941 BCAMP50895 628 aa22.71■■□□□ 1.23
HOXA9-203ENST00000465941 STRIP1Q5VSL9 837 aa22.71■■□□□ 1.23
HOXA9-203ENST00000465941 VPS37DQ86XT2 251 aa22.71■■□□□ 1.23
HOXA9-203ENST00000465941 RAB11FIP3O75154 756 aa22.7■■□□□ 1.22
HOXA9-203ENST00000465941 TTLL5Q6EMB2 1281 aa22.7■■□□□ 1.22
HOXA9-203ENST00000465941 WDR90Q96KV7 1748 aa22.7■■□□□ 1.22
HOXA9-203ENST00000465941 IQCA1LA6NCM1 817 aa22.69■■□□□ 1.22
HOXA9-203ENST00000465941 RPS12P25398 132 aaKnown RBP22.69■■□□□ 1.22
HOXA9-203ENST00000465941 GMPSP49915 693 aaPredicted RBP22.69■■□□□ 1.22
HOXA9-203ENST00000465941 SCNN1DP51172 638 aa22.69■■□□□ 1.22
HOXA9-203ENST00000465941 DPF2Q92785 391 aa22.69■■□□□ 1.22
HOXA9-203ENST00000465941 GTF2IP78347 998 aa22.68■■□□□ 1.22
HOXA9-203ENST00000465941 TNNI3KQ59H18 835 aa22.68■■□□□ 1.22
HOXA9-203ENST00000465941 DACT2Q5SW24 774 aa22.68■■□□□ 1.22
HOXA9-203ENST00000465941 RSBN1LQ6PCB5 846 aaPredicted RBP22.68■■□□□ 1.22
HOXA9-203ENST00000465941 AGBL3Q8NEM8 1001 aa22.68■■□□□ 1.22
HOXA9-203ENST00000465941 RHPN1Q8TCX5 695 aa22.68■■□□□ 1.22
HOXA9-203ENST00000465941 KIF1BPQ96EK5 621 aa22.68■■□□□ 1.22
HOXA9-203ENST00000465941 XAGE2Q96GT9 111 aa22.68■■□□□ 1.22
HOXA9-203ENST00000465941 ZBTB12Q9Y330 459 aaPredicted RBP22.68■■□□□ 1.22
HOXA9-203ENST00000465941 FPGT-TNNI3KV9GXZ4 949 aa22.68■■□□□ 1.22
HOXA9-203ENST00000465941 ZBTB22O15209 634 aa22.67■■□□□ 1.22
HOXA9-203ENST00000465941 CENPBP07199 599 aaPredicted RBP22.67■■□□□ 1.22
HOXA9-203ENST00000465941 ADORA1P30542 326 aa22.67■■□□□ 1.22
HOXA9-203ENST00000465941 NEUROD6Q96NK8 337 aa22.67■■□□□ 1.22
HOXA9-203ENST00000465941 GMLQ99445 158 aa22.67■■□□□ 1.22
HOXA9-203ENST00000465941 DCTPP1Q9H773 170 aa22.67■■□□□ 1.22
HOXA9-203ENST00000465941 GPRC5DQ9NZD1 345 aa22.67■■□□□ 1.22
HOXA9-203ENST00000465941 HACL1Q9UJ83 578 aa22.67■■□□□ 1.22
HOXA9-203ENST00000465941 ZNF609O15014 1411 aa22.66■■□□□ 1.22
HOXA9-203ENST00000465941 FAM205AQ6ZU69 1335 aa22.66■■□□□ 1.22
HOXA9-203ENST00000465941 KIF3CO14782 793 aa22.66■■□□□ 1.22
HOXA9-203ENST00000465941 IRX6P78412 446 aaPredicted RBP22.66■■□□□ 1.22
HOXA9-203ENST00000465941 SCN9AQ15858 1988 aa22.66■■□□□ 1.22
HOXA9-203ENST00000465941 MYO3BQ8WXR4 1341 aa22.65■■□□□ 1.22
HOXA9-203ENST00000465941 LMOD1P29536 600 aaPredicted RBP22.65■■□□□ 1.22
HOXA9-203ENST00000465941 FKBP1AP62942 108 aaKnown RBP22.65■■□□□ 1.22
HOXA9-203ENST00000465941 HDAC1Q13547 482 aaPredicted RBP22.65■■□□□ 1.22
HOXA9-203ENST00000465941 CCDC102BQ68D86 513 aa22.65■■□□□ 1.22
HOXA9-203ENST00000465941 FBXW7Q969H0 707 aa22.65■■□□□ 1.22
HOXA9-203ENST00000465941 GNL3LQ9NVN8 582 aaKnown RBP22.65■■□□□ 1.22
HOXA9-203ENST00000465941 CNOT7Q9UIV1 285 aaKnown RBP22.65■■□□□ 1.22
HOXA9-203ENST00000465941 FRAT2O75474 233 aaPredicted RBP22.64■■□□□ 1.21
HOXA9-203ENST00000465941 EPS15P42566 896 aa22.64■■□□□ 1.21
HOXA9-203ENST00000465941 PHKA1P46020 1223 aa22.64■■□□□ 1.21
HOXA9-203ENST00000465941 EAF2Q96CJ1 260 aaPredicted RBP22.64■■□□□ 1.21
HOXA9-203ENST00000465941 TAF1DQ9H5J8 278 aaPredicted RBP22.64■■□□□ 1.21
HOXA9-203ENST00000465941 SEMA3EO15041 775 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms