RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 COA1Q9GZY4 146 aa32.38■■■□□ 2.77
SMC4-206ENST00000465903 EYA2O00167 538 aa32.37■■■□□ 2.77
SMC4-206ENST00000465903 ZBTB7BO15156 539 aaPredicted RBP32.37■■■□□ 2.77
SMC4-206ENST00000465903 GNAI2P04899 355 aa32.37■■■□□ 2.77
SMC4-206ENST00000465903 FSTL1Q12841 308 aa32.37■■■□□ 2.77
SMC4-206ENST00000465903 MTX1Q13505 466 aa32.37■■■□□ 2.77
SMC4-206ENST00000465903 VGLL2Q8N8G2 317 aa32.37■■■□□ 2.77
SMC4-206ENST00000465903 SMC1BQ8NDV3 1235 aa32.37■■■□□ 2.77
SMC4-206ENST00000465903 UBE4AQ14139 1066 aa32.36■■■□□ 2.77
SMC4-206ENST00000465903 ITPRIPQ8IWB1 547 aa32.36■■■□□ 2.77
SMC4-206ENST00000465903 ATG9AQ7Z3C6 839 aa32.35■■■□□ 2.77
SMC4-206ENST00000465903 DPF2Q92785 391 aa32.35■■■□□ 2.77
SMC4-206ENST00000465903 SHTN1A0MZ66 631 aa32.34■■■□□ 2.77
SMC4-206ENST00000465903 EAPPQ56P03 285 aaPredicted RBP32.34■■■□□ 2.77
SMC4-206ENST00000465903 PNMA8AQ86V59 439 aaPredicted RBP32.34■■■□□ 2.77
SMC4-206ENST00000465903 PA2G4Q9UQ80 394 aaKnown RBP32.34■■■□□ 2.77
SMC4-206ENST00000465903 METTL24Q5JXM2 366 aa32.33■■■□□ 2.77
SMC4-206ENST00000465903 LDHDQ86WU2 507 aa32.33■■■□□ 2.77
SMC4-206ENST00000465903 CD209Q9NNX6 404 aa32.33■■■□□ 2.77
SMC4-206ENST00000465903 COPRSQ9NQ92 184 aa32.33■■■□□ 2.77
SMC4-206ENST00000465903 CNOT7Q9UIV1 285 aaKnown RBP32.33■■■□□ 2.77
SMC4-206ENST00000465903 PDE8BO95263 885 aa32.32■■■□□ 2.76
SMC4-206ENST00000465903 MS4A1P11836 297 aa32.32■■■□□ 2.76
SMC4-206ENST00000465903 CHADLQ6NUI6 762 aa32.32■■■□□ 2.76
SMC4-206ENST00000465903 FBXO3Q9UK99 471 aa32.32■■■□□ 2.76
SMC4-206ENST00000465903 USP17L3A6NCW0 530 aa32.31■■■□□ 2.76
SMC4-206ENST00000465903 USP17L4A6NCW7 530 aa32.31■■■□□ 2.76
SMC4-206ENST00000465903 RPS12P25398 132 aaKnown RBP32.31■■■□□ 2.76
SMC4-206ENST00000465903 USP17L1Q7RTZ2 530 aa32.31■■■□□ 2.76
SMC4-206ENST00000465903 SIL1Q9H173 461 aa32.31■■■□□ 2.76
SMC4-206ENST00000465903 ADARB2Q9NS39 739 aaKnown RBP32.31■■■□□ 2.76
SMC4-206ENST00000465903 SRGAP3O43295 1099 aa32.3■■■□□ 2.76
SMC4-206ENST00000465903 CIAO1O76071 339 aa32.3■■■□□ 2.76
SMC4-206ENST00000465903 RSBN1LQ6PCB5 846 aaPredicted RBP32.3■■■□□ 2.76
SMC4-206ENST00000465903 USP50Q70EL3 339 aaPredicted RBP32.3■■■□□ 2.76
SMC4-206ENST00000465903 ZNF609O15014 1411 aa32.29■■■□□ 2.76
SMC4-206ENST00000465903 HSPA6P17066 643 aa32.29■■■□□ 2.76
SMC4-206ENST00000465903 MICALL2Q8IY33 904 aa32.29■■■□□ 2.76
SMC4-206ENST00000465903 GMLQ99445 158 aa32.29■■■□□ 2.76
SMC4-206ENST00000465903 PNMA6EA0A0J9YXQ4 647 aa32.28■■■□□ 2.76
SMC4-206ENST00000465903 DACT2Q5SW24 774 aa32.28■■■□□ 2.76
SMC4-206ENST00000465903 C1orf115Q9H7X2 142 aa32.28■■■□□ 2.76
SMC4-206ENST00000465903 CLEC11AQ9Y240 323 aa32.28■■■□□ 2.76
SMC4-206ENST00000465903 POLR2AP24928 1970 aaKnown RBP32.27■■■□□ 2.76
SMC4-206ENST00000465903 IL1R1P14778 569 aa32.27■■■□□ 2.76
SMC4-206ENST00000465903 FGFR2P21802 821 aa32.27■■■□□ 2.76
SMC4-206ENST00000465903 STRIP1Q5VSL9 837 aa32.27■■■□□ 2.76
SMC4-206ENST00000465903 ZNF804AQ7Z570 1209 aa32.27■■■□□ 2.76
SMC4-206ENST00000465903 AGBL3Q8NEM8 1001 aa32.27■■■□□ 2.76
SMC4-206ENST00000465903 FAM84BQ96KN1 310 aaPredicted RBP32.27■■■□□ 2.76
SMC4-206ENST00000465903 MXD3Q9BW11 206 aa32.27■■■□□ 2.76
SMC4-206ENST00000465903 H7C1D1 291 aa32.26■■■□□ 2.75
SMC4-206ENST00000465903 GYG1P46976 350 aa32.26■■■□□ 2.75
SMC4-206ENST00000465903 HIRAP54198 1017 aaPredicted RBP32.26■■■□□ 2.75
SMC4-206ENST00000465903 TTLL5Q6EMB2 1281 aa32.26■■■□□ 2.75
SMC4-206ENST00000465903 ATP8B2P98198 1209 aa32.25■■■□□ 2.75
SMC4-206ENST00000465903 MVPQ14764 893 aaKnown RBP32.25■■■□□ 2.75
SMC4-206ENST00000465903 TRPM4Q8TD43 1214 aa32.25■■■□□ 2.75
SMC4-206ENST00000465903 COG6Q9Y2V7 657 aa32.25■■■□□ 2.75
SMC4-206ENST00000465903 IL15P40933 162 aaPredicted RBP32.24■■■□□ 2.75
SMC4-206ENST00000465903 GTF2IP78347 998 aa32.24■■■□□ 2.75
SMC4-206ENST00000465903 C20orf194Q5TEA3 1177 aa32.24■■■□□ 2.75
SMC4-206ENST00000465903 SAMD7Q7Z3H4 446 aa32.24■■■□□ 2.75
SMC4-206ENST00000465903 HIBADHP31937 336 aaKnown RBP32.23■■■□□ 2.75
SMC4-206ENST00000465903 POLA2Q14181 598 aa32.23■■■□□ 2.75
SMC4-206ENST00000465903 FBXO33Q7Z6M2 555 aa32.23■■■□□ 2.75
SMC4-206ENST00000465903 ITGBL1O95965 494 aaPredicted RBP32.22■■■□□ 2.75
SMC4-206ENST00000465903 EGFRP00533 1210 aa32.22■■■□□ 2.75
SMC4-206ENST00000465903 PUM3Q15397 648 aaKnown RBP32.22■■■□□ 2.75
SMC4-206ENST00000465903 MAP1SQ66K74 1059 aaPredicted RBP32.22■■■□□ 2.75
SMC4-206ENST00000465903 TDRD7Q8NHU6 1098 aaKnown RBP32.22■■■□□ 2.75
SMC4-206ENST00000465903 FBXW7Q969H0 707 aa32.22■■■□□ 2.75
SMC4-206ENST00000465903 ZNF280AP59817 542 aaPredicted RBP32.21■■■□□ 2.75
SMC4-206ENST00000465903 PDE3AQ14432 1141 aa32.21■■■□□ 2.75
SMC4-206ENST00000465903 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.21■■■□□ 2.75
SMC4-206ENST00000465903 CEP126Q9P2H0 1117 aa32.21■■■□□ 2.75
SMC4-206ENST00000465903 PGAP2Q9UHJ9 254 aa32.21■■■□□ 2.75
SMC4-206ENST00000465903 TBC1D10BQ4KMP7 808 aaPredicted RBP32.2■■■□□ 2.75
SMC4-206ENST00000465903 SSH3Q8TE77 659 aa32.2■■■□□ 2.75
SMC4-206ENST00000465903 DDX19BQ9UMR2 479 aa32.2■■■□□ 2.75
SMC4-206ENST00000465903 CNTROBQ8N137 903 aa32.19■■■□□ 2.74
SMC4-206ENST00000465903 LPIN2Q92539 896 aa32.19■■■□□ 2.74
SMC4-206ENST00000465903 SASH1O94885 1247 aa32.18■■■□□ 2.74
SMC4-206ENST00000465903 IFIT1P09914 478 aaKnown RBP32.18■■■□□ 2.74
SMC4-206ENST00000465903 USP17L8P0C7I0 530 aa32.18■■■□□ 2.74
SMC4-206ENST00000465903 RBM26Q5T8P6 1007 aaKnown RBP32.18■■■□□ 2.74
SMC4-206ENST00000465903 MYO3BQ8WXR4 1341 aa32.18■■■□□ 2.74
SMC4-206ENST00000465903 PASKQ96RG2 1323 aa32.18■■■□□ 2.74
SMC4-206ENST00000465903 BCAMP50895 628 aa32.17■■■□□ 2.74
SMC4-206ENST00000465903 CERS5Q8N5B7 392 aa32.17■■■□□ 2.74
SMC4-206ENST00000465903 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.17■■■□□ 2.74
SMC4-206ENST00000465903 SLC5A1P13866 664 aa32.16■■■□□ 2.74
SMC4-206ENST00000465903 CAVIN4Q5BKX8 364 aa32.16■■■□□ 2.74
SMC4-206ENST00000465903 CEP85Q6P2H3 762 aa32.16■■■□□ 2.74
SMC4-206ENST00000465903 ZC3H15Q8WU90 426 aaKnown RBP32.16■■■□□ 2.74
SMC4-206ENST00000465903 ZBTB40Q9NUA8 1239 aa32.16■■■□□ 2.74
SMC4-206ENST00000465903 JAG2Q9Y219 1238 aa32.16■■■□□ 2.74
SMC4-206ENST00000465903 FAM205AQ6ZU69 1335 aa32.16■■■□□ 2.74
SMC4-206ENST00000465903 MYH13Q9UKX3 1938 aa32.16■■■□□ 2.74
SMC4-206ENST00000465903 APLP1P51693 650 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 889 ms