RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 LTKP29376 864 aa7.25□□□□□ -1.25
EXOSC3-204ENST00000465860 TYRO3Q06418 890 aa7.25□□□□□ -1.25
EXOSC3-204ENST00000465860 LARP1Q6PKG0 1096 aaKnown RBP7.25□□□□□ -1.25
EXOSC3-204ENST00000465860 STAG2Q8N3U4 1231 aa7.25□□□□□ -1.25
EXOSC3-204ENST00000465860 CEP63Q96MT8 703 aa7.25□□□□□ -1.25
EXOSC3-204ENST00000465860 ANKIB1Q9P2G1 1089 aa7.25□□□□□ -1.25
EXOSC3-204ENST00000465860 TMEM131LA2VDJ0 1609 aa7.25□□□□□ -1.25
EXOSC3-204ENST00000465860 RPRD2Q5VT52 1461 aaKnown RBP7.24□□□□□ -1.25
EXOSC3-204ENST00000465860 ADGRB3O60242 1522 aa7.24□□□□□ -1.25
EXOSC3-204ENST00000465860 SLIT1O75093 1534 aa7.24□□□□□ -1.25
EXOSC3-204ENST00000465860 LMOD1P29536 600 aaPredicted RBP7.24□□□□□ -1.25
EXOSC3-204ENST00000465860 SPEM2Q0P670 501 aa7.24□□□□□ -1.25
EXOSC3-204ENST00000465860 DPYDQ12882 1025 aa7.24□□□□□ -1.25
EXOSC3-204ENST00000465860 RAB44Q7Z6P3 723 aaPredicted RBP7.24□□□□□ -1.25
EXOSC3-204ENST00000465860 GAS2L2Q8NHY3 880 aa7.24□□□□□ -1.25
EXOSC3-204ENST00000465860 TRIM11Q96F44 468 aa7.24□□□□□ -1.25
EXOSC3-204ENST00000465860 MED14O60244 1454 aa7.24□□□□□ -1.25
EXOSC3-204ENST00000465860 CLTCL1P53675 1640 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 XIRP1Q702N8 1843 aaKnown RBP7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 USP17L15C9J2P7 530 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 USP17L10C9JJH3 530 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 USP17L13C9JLJ4 530 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 USP17L12C9JPN9 530 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 USP17L11C9JVI0 530 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 USP17L21D6R901 530 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 USP17L18D6R9N7 530 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 USP17L22D6RA61 530 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 USP17L17D6RBQ6 530 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 USP17L19D6RCP7 530 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 USP17L20D6RJB6 530 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 KCNQ4P56696 695 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 USP17L24Q0WX57 530 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 THEMISQ8N1K5 641 aaPredicted RBP7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 TNFRSF25Q93038 417 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 NGLY1Q96IV0 654 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 HINFPQ9BQA5 517 aa7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 NOP53Q9NZM5 478 aaKnown RBP7.23□□□□□ -1.25
EXOSC3-204ENST00000465860 NPHP4O75161 1426 aaPredicted RBP7.22□□□□□ -1.25
EXOSC3-204ENST00000465860 FAM196BA6NMK8 535 aa7.22□□□□□ -1.25
EXOSC3-204ENST00000465860 ADARB2-AS1A8MUL3 147 aa7.22□□□□□ -1.25
EXOSC3-204ENST00000465860 C1QTNF9BB2RNN3 333 aa7.22□□□□□ -1.25
EXOSC3-204ENST00000465860 ALAS2P22557 587 aa7.22□□□□□ -1.25
EXOSC3-204ENST00000465860 ANKLE2Q86XL3 938 aa7.22□□□□□ -1.25
EXOSC3-204ENST00000465860 ANKMY2Q8IV38 441 aa7.22□□□□□ -1.25
EXOSC3-204ENST00000465860 VRTNQ9H8Y1 702 aa7.22□□□□□ -1.25
EXOSC3-204ENST00000465860 KCNH4Q9UQ05 1017 aa7.22□□□□□ -1.25
EXOSC3-204ENST00000465860 SCAF11Q99590 1463 aaKnown RBP7.22□□□□□ -1.25
EXOSC3-204ENST00000465860 TMEM2Q9UHN6 1383 aa7.21□□□□□ -1.25
EXOSC3-204ENST00000465860 ZFYVE9O95405 1425 aa7.21□□□□□ -1.25
EXOSC3-204ENST00000465860 ADAM23O75077 832 aa7.21□□□□□ -1.26
EXOSC3-204ENST00000465860 CHRNA4P43681 627 aa7.21□□□□□ -1.26
EXOSC3-204ENST00000465860 BAG6P46379 1132 aa7.21□□□□□ -1.26
EXOSC3-204ENST00000465860 BTLAQ7Z6A9 289 aa7.21□□□□□ -1.26
EXOSC3-204ENST00000465860 CD163Q86VB7 1156 aa7.21□□□□□ -1.26
EXOSC3-204ENST00000465860 PLVAPQ9BX97 442 aa7.21□□□□□ -1.26
EXOSC3-204ENST00000465860 STARD13Q9Y3M8 1113 aa7.21□□□□□ -1.26
EXOSC3-204ENST00000465860 IGFBP4P22692 258 aa7.2□□□□□ -1.26
EXOSC3-204ENST00000465860 CFAP70Q5T0N1 1121 aa7.2□□□□□ -1.26
EXOSC3-204ENST00000465860 TXNDC2Q86VQ3 553 aa7.2□□□□□ -1.26
EXOSC3-204ENST00000465860 ARXQ96QS3 562 aa7.2□□□□□ -1.26
EXOSC3-204ENST00000465860 KIF1BO60333 1816 aa7.2□□□□□ -1.26
EXOSC3-204ENST00000465860 ALKQ9UM73 1620 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 TRPM2O94759 1503 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 M0R082 166 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 ALBP02768 609 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 ADH7P40394 386 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 NEUROD1Q13562 356 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 COL9A3Q14050 684 aaPredicted RBP7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 RTN1Q16799 776 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 ZNF417Q8TAU3 575 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 FBXO41Q8TF61 875 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 BHMTQ93088 406 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 ZNF587Q96SQ5 575 aaPredicted RBP7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 SLC52A1Q9NWF4 448 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 BCS1LQ9Y276 419 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 NRXN3Q9Y4C0 1643 aa7.19□□□□□ -1.26
EXOSC3-204ENST00000465860 RIMS2Q9UQ26 1411 aa7.18□□□□□ -1.26
EXOSC3-204ENST00000465860 CHD2O14647 1828 aaKnown RBP7.18□□□□□ -1.26
EXOSC3-204ENST00000465860 HIF1AQ16665 826 aa7.18□□□□□ -1.26
EXOSC3-204ENST00000465860 C8orf86Q6ZUL3 223 aa7.18□□□□□ -1.26
EXOSC3-204ENST00000465860 SETD5Q9C0A6 1442 aa7.18□□□□□ -1.26
EXOSC3-204ENST00000465860 IER5Q5VY09 327 aa7.17□□□□□ -1.26
EXOSC3-204ENST00000465860 MICALL1Q8N3F8 863 aa7.17□□□□□ -1.26
EXOSC3-204ENST00000465860 SLC26A8Q96RN1 970 aa7.17□□□□□ -1.26
EXOSC3-204ENST00000465860 DMGDHQ9UI17 866 aaKnown RBP7.17□□□□□ -1.26
EXOSC3-204ENST00000465860 RAB3GAP2Q9H2M9 1393 aa7.17□□□□□ -1.26
EXOSC3-204ENST00000465860 NEXMIFQ5QGS0 1516 aa7.17□□□□□ -1.26
EXOSC3-204ENST00000465860 LRRC7Q96NW7 1537 aa7.17□□□□□ -1.26
EXOSC3-204ENST00000465860 PPLO60437 1756 aa7.16□□□□□ -1.26
EXOSC3-204ENST00000465860 TGFBR3LH3BV60 316 aa7.16□□□□□ -1.26
EXOSC3-204ENST00000465860 K7ELQ4 463 aaPredicted RBP7.16□□□□□ -1.26
EXOSC3-204ENST00000465860 FURINP09958 794 aa7.16□□□□□ -1.26
EXOSC3-204ENST00000465860 SPATA31C1P0DKV0 1188 aa7.16□□□□□ -1.26
EXOSC3-204ENST00000465860 WEE1P30291 646 aa7.16□□□□□ -1.26
EXOSC3-204ENST00000465860 CDCA8Q53HL2 280 aa7.16□□□□□ -1.26
EXOSC3-204ENST00000465860 C20orf204Q6ZNR8 217 aa7.16□□□□□ -1.26
EXOSC3-204ENST00000465860 PRDM6Q9NQX0 595 aa7.16□□□□□ -1.26
EXOSC3-204ENST00000465860 CPS1P31327 1500 aa7.16□□□□□ -1.26
EXOSC3-204ENST00000465860 SETD1AO15047 1707 aaKnown RBP7.15□□□□□ -1.26
EXOSC3-204ENST00000465860 GRNP28799 593 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms