RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 IER5LQ5T953 404 aa14.08□□□□□ -0.16
TMCO1-204ENST00000465705 C9orf131Q5VYM1 1079 aa14.08□□□□□ -0.16
TMCO1-204ENST00000465705 LDHAL6AQ6ZMR3 332 aa14.08□□□□□ -0.16
TMCO1-204ENST00000465705 RNF25Q96BH1 459 aaPredicted RBP14.08□□□□□ -0.16
TMCO1-204ENST00000465705 MINPP1Q9UNW1 487 aa14.08□□□□□ -0.16
TMCO1-204ENST00000465705 XDHP47989 1333 aa14.08□□□□□ -0.16
TMCO1-204ENST00000465705 UTRNP46939 3433 aa14.08□□□□□ -0.16
TMCO1-204ENST00000465705 UFL1O94874 794 aa14.07□□□□□ -0.16
TMCO1-204ENST00000465705 IARSP41252 1262 aaKnown RBP14.07□□□□□ -0.16
TMCO1-204ENST00000465705 MTX1Q13505 466 aa14.07□□□□□ -0.16
TMCO1-204ENST00000465705 KLHDC4Q8TBB5 520 aa14.07□□□□□ -0.16
TMCO1-204ENST00000465705 RTFDC1Q9BY42 306 aaPredicted RBP14.07□□□□□ -0.16
TMCO1-204ENST00000465705 ANKRD2Q9GZV1 360 aa14.07□□□□□ -0.16
TMCO1-204ENST00000465705 PODXL2Q9NZ53 605 aa14.07□□□□□ -0.16
TMCO1-204ENST00000465705 GGA1Q9UJY5 639 aa14.07□□□□□ -0.16
TMCO1-204ENST00000465705 SBF1O95248 1867 aa14.07□□□□□ -0.16
TMCO1-204ENST00000465705 TIAM2Q8IVF5 1701 aa14.07□□□□□ -0.16
TMCO1-204ENST00000465705 C6orf229H3BNL8 230 aa14.06□□□□□ -0.16
TMCO1-204ENST00000465705 RFX5P48382 616 aaPredicted RBP14.06□□□□□ -0.16
TMCO1-204ENST00000465705 PRELPP51888 382 aa14.06□□□□□ -0.16
TMCO1-204ENST00000465705 CHRNDQ07001 517 aa14.06□□□□□ -0.16
TMCO1-204ENST00000465705 SUPT16HQ9Y5B9 1047 aaKnown RBP14.06□□□□□ -0.16
TMCO1-204ENST00000465705 PPIP5K2O43314 1243 aa14.05□□□□□ -0.16
TMCO1-204ENST00000465705 ATP2B4P23634 1241 aa14.05□□□□□ -0.16
TMCO1-204ENST00000465705 KCNJ4P48050 445 aa14.05□□□□□ -0.16
TMCO1-204ENST00000465705 LARGE2Q8N3Y3 721 aa14.05□□□□□ -0.16
TMCO1-204ENST00000465705 TBC1D16Q8TBP0 767 aa14.05□□□□□ -0.16
TMCO1-204ENST00000465705 OTUD5Q96G74 571 aa14.05□□□□□ -0.16
TMCO1-204ENST00000465705 EYA3Q99504 573 aa14.05□□□□□ -0.16
TMCO1-204ENST00000465705 ZBTB40Q9NUA8 1239 aa14.05□□□□□ -0.16
TMCO1-204ENST00000465705 POLLQ9UGP5 575 aa14.05□□□□□ -0.16
TMCO1-204ENST00000465705 CCDC88AQ3V6T2 1871 aa14.05□□□□□ -0.16
TMCO1-204ENST00000465705 A0A1B0GUL6 1792 aa14.04□□□□□ -0.16
TMCO1-204ENST00000465705 PNMA6EA0A0J9YXQ4 647 aa14.04□□□□□ -0.16
TMCO1-204ENST00000465705 PTPN12Q05209 780 aaKnown RBP14.04□□□□□ -0.16
TMCO1-204ENST00000465705 AOC3Q16853 763 aa14.04□□□□□ -0.16
TMCO1-204ENST00000465705 WASHC4Q2M389 1173 aa14.04□□□□□ -0.16
TMCO1-204ENST00000465705 JDP2Q8WYK2 163 aa14.04□□□□□ -0.16
TMCO1-204ENST00000465705 PUS3Q9BZE2 481 aaKnown RBP14.04□□□□□ -0.16
TMCO1-204ENST00000465705 SIL1Q9H173 461 aa14.04□□□□□ -0.16
TMCO1-204ENST00000465705 VPS33BQ9H267 617 aa14.04□□□□□ -0.16
TMCO1-204ENST00000465705 MROH5Q6ZUA9 1318 aa14.04□□□□□ -0.16
TMCO1-204ENST00000465705 ZC3H4Q9UPT8 1303 aaKnown RBP14.04□□□□□ -0.16
TMCO1-204ENST00000465705 EYA2O00167 538 aa14.03□□□□□ -0.16
TMCO1-204ENST00000465705 CIAO1O76071 339 aa14.03□□□□□ -0.16
TMCO1-204ENST00000465705 ATP8B2P98198 1209 aa14.03□□□□□ -0.16
TMCO1-204ENST00000465705 KIAA2012Q0VF49 1180 aa14.03□□□□□ -0.16
TMCO1-204ENST00000465705 LRRC24Q50LG9 513 aa14.03□□□□□ -0.16
TMCO1-204ENST00000465705 METTL24Q5JXM2 366 aa14.03□□□□□ -0.16
TMCO1-204ENST00000465705 CEP85Q6P2H3 762 aa14.03□□□□□ -0.16
TMCO1-204ENST00000465705 NIM1KQ8IY84 436 aa14.03□□□□□ -0.16
TMCO1-204ENST00000465705 HELBQ8NG08 1087 aaPredicted RBP14.03□□□□□ -0.16
TMCO1-204ENST00000465705 COPRSQ9NQ92 184 aa14.03□□□□□ -0.16
TMCO1-204ENST00000465705 PA2G4Q9UQ80 394 aaKnown RBP14.03□□□□□ -0.16
TMCO1-204ENST00000465705 LEMD3Q9Y2U8 911 aa14.03□□□□□ -0.16
TMCO1-204ENST00000465705 RIPOR2Q9Y4F9 1068 aa14.03□□□□□ -0.16
TMCO1-204ENST00000465705 ZNF804BA4D1E1 1349 aa14.03□□□□□ -0.16
TMCO1-204ENST00000465705 DICER1Q9UPY3 1922 aaKnown RBP14.03□□□□□ -0.16
TMCO1-204ENST00000465705 MED23Q9ULK4 1368 aa14.02□□□□□ -0.17
TMCO1-204ENST00000465705 RIMBP2O15034 1052 aa14.02□□□□□ -0.17
TMCO1-204ENST00000465705 TAF5LO75529 589 aa14.02□□□□□ -0.17
TMCO1-204ENST00000465705 GPR101Q96P66 508 aaPredicted RBP14.02□□□□□ -0.17
TMCO1-204ENST00000465705 CRBNQ96SW2 442 aa14.02□□□□□ -0.17
TMCO1-204ENST00000465705 ZC3H12CQ9C0D7 883 aaKnown RBP14.02□□□□□ -0.17
TMCO1-204ENST00000465705 COL4A5P29400 1685 aa14.01□□□□□ -0.17
TMCO1-204ENST00000465705 G3V3G9 751 aa14.01□□□□□ -0.17
TMCO1-204ENST00000465705 RIOK3O14730 519 aaKnown RBP14.01□□□□□ -0.17
TMCO1-204ENST00000465705 ECM2O94769 699 aaPredicted RBP14.01□□□□□ -0.17
TMCO1-204ENST00000465705 IL15P40933 162 aaPredicted RBP14.01□□□□□ -0.17
TMCO1-204ENST00000465705 IRX5P78411 483 aaPredicted RBP14.01□□□□□ -0.17
TMCO1-204ENST00000465705 SSH3Q8TE77 659 aa14.01□□□□□ -0.17
TMCO1-204ENST00000465705 HMMRO75330 724 aa14□□□□□ -0.17
TMCO1-204ENST00000465705 PDE8BO95263 885 aa14□□□□□ -0.17
TMCO1-204ENST00000465705 PLCG2P16885 1265 aa14□□□□□ -0.17
TMCO1-204ENST00000465705 ATG9AQ7Z3C6 839 aa14□□□□□ -0.17
TMCO1-204ENST00000465705 RPAP2Q8IXW5 612 aaPredicted RBP14□□□□□ -0.17
TMCO1-204ENST00000465705 WTIPA6NIX2 430 aaPredicted RBP13.99□□□□□ -0.17
TMCO1-204ENST00000465705 G3BP1Q13283 466 aaKnown RBP eCLIP13.99□□□□□ -0.17
TMCO1-204ENST00000465705 OS9Q13438 667 aaPredicted RBP13.99□□□□□ -0.17
TMCO1-204ENST00000465705 UBE4AQ14139 1066 aa13.99□□□□□ -0.17
TMCO1-204ENST00000465705 PUM3Q15397 648 aaKnown RBP13.99□□□□□ -0.17
TMCO1-204ENST00000465705 VGLL2Q8N8G2 317 aa13.99□□□□□ -0.17
TMCO1-204ENST00000465705 DBNDD1Q9H9R9 158 aa13.99□□□□□ -0.17
TMCO1-204ENST00000465705 CEP126Q9P2H0 1117 aa13.99□□□□□ -0.17
TMCO1-204ENST00000465705 ZNRF3Q9ULT6 936 aa13.99□□□□□ -0.17
TMCO1-204ENST00000465705 FZD9O00144 591 aa13.98□□□□□ -0.17
TMCO1-204ENST00000465705 SNAP23O00161 211 aa13.98□□□□□ -0.17
TMCO1-204ENST00000465705 ECE2O60344 883 aa13.98□□□□□ -0.17
TMCO1-204ENST00000465705 SURF6O75683 361 aaKnown RBP13.98□□□□□ -0.17
TMCO1-204ENST00000465705 CENPBP07199 599 aaPredicted RBP13.98□□□□□ -0.17
TMCO1-204ENST00000465705 KLRK1P26718 216 aa13.98□□□□□ -0.17
TMCO1-204ENST00000465705 EIF6P56537 245 aaKnown RBP13.98□□□□□ -0.17
TMCO1-204ENST00000465705 DOK7Q18PE1 504 aa13.98□□□□□ -0.17
TMCO1-204ENST00000465705 DPY19L2Q6NUT2 758 aa13.98□□□□□ -0.17
TMCO1-204ENST00000465705 KDM2BQ8NHM5 1336 aa13.97□□□□□ -0.17
TMCO1-204ENST00000465705 ZNF541Q9H0D2 1346 aa13.97□□□□□ -0.17
TMCO1-204ENST00000465705 IFIT1P09914 478 aaKnown RBP13.97□□□□□ -0.17
TMCO1-204ENST00000465705 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
TMCO1-204ENST00000465705 ZNF526Q8TF50 670 aaPredicted RBP13.97□□□□□ -0.17
TMCO1-204ENST00000465705 GLTPD2A6NH11 291 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms