RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 ADORA1P30542 326 aa16.41■□□□□ 0.22
ATF3-208ENST00000465155 UBE4AQ14139 1066 aa16.41■□□□□ 0.22
ATF3-208ENST00000465155 OSBPL3Q9H4L5 887 aa16.41■□□□□ 0.22
ATF3-208ENST00000465155 STAP2Q9UGK3 403 aa16.41■□□□□ 0.22
ATF3-208ENST00000465155 ZNF804BA4D1E1 1349 aa16.4■□□□□ 0.22
ATF3-208ENST00000465155 TTC41PQ6P2S7 1318 aa16.4■□□□□ 0.22
ATF3-208ENST00000465155 GORABQ5T7V8 394 aa16.4■□□□□ 0.22
ATF3-208ENST00000465155 NLGN2Q8NFZ4 835 aa16.4■□□□□ 0.22
ATF3-208ENST00000465155 FHDC1Q9C0D6 1143 aaPredicted RBP16.4■□□□□ 0.22
ATF3-208ENST00000465155 ECHDC1Q9NTX5 307 aa16.4■□□□□ 0.22
ATF3-208ENST00000465155 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
ATF3-208ENST00000465155 LEMD3Q9Y2U8 911 aa16.4■□□□□ 0.22
ATF3-208ENST00000465155 MPNDQ8N594 471 aa16.39■□□□□ 0.21
ATF3-208ENST00000465155 PODXL2Q9NZ53 605 aa16.39■□□□□ 0.21
ATF3-208ENST00000465155 GGA1Q9UJY5 639 aa16.39■□□□□ 0.21
ATF3-208ENST00000465155 AOX1Q06278 1338 aa16.38■□□□□ 0.21
ATF3-208ENST00000465155 C21orf2O43822 256 aa16.38■□□□□ 0.21
ATF3-208ENST00000465155 UFL1O94874 794 aa16.38■□□□□ 0.21
ATF3-208ENST00000465155 ATP2B4P23634 1241 aa16.38■□□□□ 0.21
ATF3-208ENST00000465155 CCDC158Q5M9N0 1113 aa16.38■□□□□ 0.21
ATF3-208ENST00000465155 C7orf43Q8WVR3 580 aa16.38■□□□□ 0.21
ATF3-208ENST00000465155 ERC2O15083 957 aa16.37■□□□□ 0.21
ATF3-208ENST00000465155 ZBTB22O15209 634 aa16.37■□□□□ 0.21
ATF3-208ENST00000465155 DALRD3Q5D0E6 543 aaKnown RBP16.37■□□□□ 0.21
ATF3-208ENST00000465155 TTC22Q5TAA0 569 aa16.37■□□□□ 0.21
ATF3-208ENST00000465155 DPP8Q6V1X1 898 aaPredicted RBP16.37■□□□□ 0.21
ATF3-208ENST00000465155 PI4K2BQ8TCG2 481 aa16.37■□□□□ 0.21
ATF3-208ENST00000465155 POLLQ9UGP5 575 aa16.37■□□□□ 0.21
ATF3-208ENST00000465155 DUOX1Q9NRD9 1551 aa16.37■□□□□ 0.21
ATF3-208ENST00000465155 C6orf229H3BNL8 230 aa16.37■□□□□ 0.21
ATF3-208ENST00000465155 GLRX3O76003 335 aaKnown RBP16.37■□□□□ 0.21
ATF3-208ENST00000465155 KLRK1P26718 216 aa16.37■□□□□ 0.21
ATF3-208ENST00000465155 TTC39AQ5SRH9 613 aa16.37■□□□□ 0.21
ATF3-208ENST00000465155 TBC1D16Q8TBP0 767 aa16.37■□□□□ 0.21
ATF3-208ENST00000465155 GSPT1P15170 499 aaKnown RBP16.36■□□□□ 0.21
ATF3-208ENST00000465155 PHKA1P46020 1223 aa16.36■□□□□ 0.21
ATF3-208ENST00000465155 BCAMP50895 628 aa16.36■□□□□ 0.21
ATF3-208ENST00000465155 CAVIN4Q5BKX8 364 aa16.36■□□□□ 0.21
ATF3-208ENST00000465155 CCDC102BQ68D86 513 aa16.36■□□□□ 0.21
ATF3-208ENST00000465155 CC2D2BQ6DHV5 1058 aa16.36■□□□□ 0.21
ATF3-208ENST00000465155 GPR101Q96P66 508 aaPredicted RBP16.36■□□□□ 0.21
ATF3-208ENST00000465155 ATP5JP18859 108 aa16.35■□□□□ 0.21
ATF3-208ENST00000465155 GYG1P46976 350 aa16.35■□□□□ 0.21
ATF3-208ENST00000465155 TXNRD3Q86VQ6 643 aa16.35■□□□□ 0.21
ATF3-208ENST00000465155 BOLA2Q9H3K6 86 aa16.35■□□□□ 0.21
ATF3-208ENST00000465155 GOLGB1Q14789 3259 aaKnown RBP16.35■□□□□ 0.21
ATF3-208ENST00000465155 AK9Q5TCS8 1911 aa16.35■□□□□ 0.21
ATF3-208ENST00000465155 IRS2Q9Y4H2 1338 aa16.35■□□□□ 0.21
ATF3-208ENST00000465155 MYH13Q9UKX3 1938 aa16.34■□□□□ 0.21
ATF3-208ENST00000465155 CCDC93Q567U6 631 aa16.34■□□□□ 0.21
ATF3-208ENST00000465155 VPS37DQ86XT2 251 aa16.34■□□□□ 0.21
ATF3-208ENST00000465155 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
ATF3-208ENST00000465155 SNED1Q8TER0 1413 aa16.34■□□□□ 0.21
ATF3-208ENST00000465155 ARFGEF1Q9Y6D6 1849 aa16.34■□□□□ 0.21
ATF3-208ENST00000465155 MAP4K4O95819 1239 aaPredicted RBP16.34■□□□□ 0.21
ATF3-208ENST00000465155 BMP2KLQ5H9B9 411 aa16.34■□□□□ 0.21
ATF3-208ENST00000465155 SOGA3Q5TF21 947 aa16.34■□□□□ 0.21
ATF3-208ENST00000465155 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
ATF3-208ENST00000465155 FAM84BQ96KN1 310 aaPredicted RBP16.34■□□□□ 0.21
ATF3-208ENST00000465155 SYT17Q9BSW7 474 aa16.34■□□□□ 0.21
ATF3-208ENST00000465155 AKAP11Q9UKA4 1901 aa16.33■□□□□ 0.21
ATF3-208ENST00000465155 MED23Q9ULK4 1368 aa16.33■□□□□ 0.21
ATF3-208ENST00000465155 TRIM6-TRIM34B2RNG4 842 aa16.33■□□□□ 0.2
ATF3-208ENST00000465155 UQCRFS1P1P0C7P4 283 aa16.33■□□□□ 0.2
ATF3-208ENST00000465155 ARID4AP29374 1257 aaPredicted RBP16.33■□□□□ 0.2
ATF3-208ENST00000465155 HIBADHP31937 336 aaKnown RBP16.33■□□□□ 0.2
ATF3-208ENST00000465155 GRIPAP1Q4V328 841 aa16.33■□□□□ 0.2
ATF3-208ENST00000465155 C15orf52Q6ZUT6 534 aaKnown RBP16.33■□□□□ 0.2
ATF3-208ENST00000465155 RTKN2Q8IZC4 609 aa16.33■□□□□ 0.2
ATF3-208ENST00000465155 ZNF512BQ96KM6 892 aaPredicted RBP16.33■□□□□ 0.2
ATF3-208ENST00000465155 RIMBP2O15034 1052 aa16.32■□□□□ 0.2
ATF3-208ENST00000465155 SCARF1Q14162 830 aa16.32■□□□□ 0.2
ATF3-208ENST00000465155 FBXO33Q7Z6M2 555 aa16.32■□□□□ 0.2
ATF3-208ENST00000465155 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.32■□□□□ 0.2
ATF3-208ENST00000465155 DNAJC2Q99543 621 aaKnown RBP16.32■□□□□ 0.2
ATF3-208ENST00000465155 HAUS7Q99871 368 aa16.32■□□□□ 0.2
ATF3-208ENST00000465155 RTFDC1Q9BY42 306 aaPredicted RBP16.32■□□□□ 0.2
ATF3-208ENST00000465155 NDUFB9Q9Y6M9 179 aa16.32■□□□□ 0.2
ATF3-208ENST00000465155 FER1L6Q2WGJ9 1857 aa16.32■□□□□ 0.2
ATF3-208ENST00000465155 SDSP20132 328 aa16.31■□□□□ 0.2
ATF3-208ENST00000465155 MCAMP43121 646 aa16.31■□□□□ 0.2
ATF3-208ENST00000465155 WASHC4Q2M389 1173 aa16.31■□□□□ 0.2
ATF3-208ENST00000465155 ZNF804AQ7Z570 1209 aa16.31■□□□□ 0.2
ATF3-208ENST00000465155 RILPL2Q969X0 211 aa16.31■□□□□ 0.2
ATF3-208ENST00000465155 EYA3Q99504 573 aa16.31■□□□□ 0.2
ATF3-208ENST00000465155 ZC3H12CQ9C0D7 883 aaKnown RBP16.31■□□□□ 0.2
ATF3-208ENST00000465155 SNRKQ9NRH2 765 aa16.31■□□□□ 0.2
ATF3-208ENST00000465155 GNL3LQ9NVN8 582 aaKnown RBP16.31■□□□□ 0.2
ATF3-208ENST00000465155 IQSEC3Q9UPP2 1182 aaPredicted RBP16.31■□□□□ 0.2
ATF3-208ENST00000465155 FKBP4Q02790 459 aaKnown RBP eCLIP16.3■□□□□ 0.2
ATF3-208ENST00000465155 PI16Q6UXB8 463 aa16.3■□□□□ 0.2
ATF3-208ENST00000465155 SUPT20HQ8NEM7 779 aa16.3■□□□□ 0.2
ATF3-208ENST00000465155 FRAT2O75474 233 aaPredicted RBP16.3■□□□□ 0.2
ATF3-208ENST00000465155 RASGRF1Q13972 1273 aa16.3■□□□□ 0.2
ATF3-208ENST00000465155 CNTROBQ8N137 903 aa16.3■□□□□ 0.2
ATF3-208ENST00000465155 EDC3Q96F86 508 aaKnown RBP16.3■□□□□ 0.2
ATF3-208ENST00000465155 PSMD1Q99460 953 aa16.3■□□□□ 0.2
ATF3-208ENST00000465155 HMG20BQ9P0W2 317 aa16.3■□□□□ 0.2
ATF3-208ENST00000465155 ZAP70P43403 619 aa16.29■□□□□ 0.2
ATF3-208ENST00000465155 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms