RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 AGLP35573 1532 aa8.54□□□□□ -1.04
CD46-211ENST00000464082 LRRC9Q6ZRR7 1453 aa8.53□□□□□ -1.04
CD46-211ENST00000464082 MTUS2Q5JR59 1369 aa8.53□□□□□ -1.04
CD46-211ENST00000464082 KRT25Q7Z3Z0 450 aa8.53□□□□□ -1.04
CD46-211ENST00000464082 SLC51AQ86UW1 340 aa8.53□□□□□ -1.04
CD46-211ENST00000464082 C2orf49Q9BVC5 232 aaPredicted RBP8.53□□□□□ -1.04
CD46-211ENST00000464082 ATP7AQ04656 1500 aa8.53□□□□□ -1.04
CD46-211ENST00000464082 KIAA1107Q9UPP5 1409 aa8.53□□□□□ -1.04
CD46-211ENST00000464082 GP2P55259 537 aaKnown RBP8.52□□□□□ -1.05
CD46-211ENST00000464082 DHX32Q7L7V1 743 aaKnown RBP8.52□□□□□ -1.05
CD46-211ENST00000464082 TRPM4Q8TD43 1214 aa8.52□□□□□ -1.05
CD46-211ENST00000464082 LMTK3Q96Q04 1460 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 ATAD2Q6PL18 1390 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 CCNB3Q8WWL7 1395 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 PREX1Q8TCU6 1659 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 M0R2N6 131 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 ADAMTS4O75173 837 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 MAP3K6O95382 1288 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 TGFB1P01137 390 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 TARSP26639 723 aaKnown RBP8.51□□□□□ -1.05
CD46-211ENST00000464082 ATP1A2P50993 1020 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 PCSK7Q16549 785 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 IER5Q5VY09 327 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 HFE2Q6ZVN8 426 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 OGFOD1Q8N543 542 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 TTC9Q92623 222 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 SMG9Q9H0W8 520 aaKnown RBP8.51□□□□□ -1.05
CD46-211ENST00000464082 RNF114Q9Y508 228 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 ZNF644Q9H582 1327 aaPredicted RBP8.51□□□□□ -1.05
CD46-211ENST00000464082 PLEKHH2Q8IVE3 1493 aa8.51□□□□□ -1.05
CD46-211ENST00000464082 MROH2AA6NES4 1674 aa8.5□□□□□ -1.05
CD46-211ENST00000464082 F8W735 103 aaPredicted RBP8.5□□□□□ -1.05
CD46-211ENST00000464082 DKK1O94907 266 aa8.5□□□□□ -1.05
CD46-211ENST00000464082 ARHGEF5Q12774 1597 aa8.5□□□□□ -1.05
CD46-211ENST00000464082 HIF1AQ16665 826 aa8.5□□□□□ -1.05
CD46-211ENST00000464082 SCG3Q8WXD2 468 aaKnown RBP8.5□□□□□ -1.05
CD46-211ENST00000464082 COG6Q9Y2V7 657 aa8.5□□□□□ -1.05
CD46-211ENST00000464082 CAMSAP2Q08AD1 1489 aa8.5□□□□□ -1.05
CD46-211ENST00000464082 USP17L3A6NCW0 530 aa8.49□□□□□ -1.05
CD46-211ENST00000464082 USP17L4A6NCW7 530 aa8.49□□□□□ -1.05
CD46-211ENST00000464082 KIAA1324LA8MWY0 1029 aaPredicted RBP8.49□□□□□ -1.05
CD46-211ENST00000464082 TGFBR3LH3BV60 316 aa8.49□□□□□ -1.05
CD46-211ENST00000464082 HNRNPMP52272 730 aaKnown RBP eCLIP8.49□□□□□ -1.05
CD46-211ENST00000464082 MCM6Q14566 821 aa8.49□□□□□ -1.05
CD46-211ENST00000464082 KANK4Q5T7N3 995 aaPredicted RBP8.49□□□□□ -1.05
CD46-211ENST00000464082 USP17L2Q6R6M4 530 aa8.49□□□□□ -1.05
CD46-211ENST00000464082 USP17L1Q7RTZ2 530 aa8.49□□□□□ -1.05
CD46-211ENST00000464082 TMEM130Q8N3G9 435 aa8.49□□□□□ -1.05
CD46-211ENST00000464082 STAG2Q8N3U4 1231 aa8.49□□□□□ -1.05
CD46-211ENST00000464082 LARGE2Q8N3Y3 721 aa8.49□□□□□ -1.05
CD46-211ENST00000464082 IFT43Q96FT9 208 aa8.49□□□□□ -1.05
CD46-211ENST00000464082 BCANQ96GW7 911 aa8.49□□□□□ -1.05
CD46-211ENST00000464082 CROCC2H7BZ55 1655 aa8.49□□□□□ -1.05
CD46-211ENST00000464082 CLTCQ00610 1675 aaKnown RBP8.49□□□□□ -1.05
CD46-211ENST00000464082 ARID4BQ4LE39 1312 aaPredicted RBP8.49□□□□□ -1.05
CD46-211ENST00000464082 SASH3O75995 380 aa8.48□□□□□ -1.05
CD46-211ENST00000464082 INPP5BP32019 993 aa8.48□□□□□ -1.05
CD46-211ENST00000464082 GPLD1P80108 840 aa8.48□□□□□ -1.05
CD46-211ENST00000464082 FZD5Q13467 585 aa8.48□□□□□ -1.05
CD46-211ENST00000464082 PLEKHM2Q8IWE5 1019 aa8.48□□□□□ -1.05
CD46-211ENST00000464082 AGGF1Q8N302 714 aaeCLIP8.48□□□□□ -1.05
CD46-211ENST00000464082 GAS2L2Q8NHY3 880 aa8.48□□□□□ -1.05
CD46-211ENST00000464082 ZNF594Q96JF6 807 aaPredicted RBP8.48□□□□□ -1.05
CD46-211ENST00000464082 MRPL18Q9H0U6 180 aaKnown RBP8.48□□□□□ -1.05
CD46-211ENST00000464082 CFDP1Q9UEE9 299 aaPredicted RBP8.48□□□□□ -1.05
CD46-211ENST00000464082 STRCQ7RTU9 1775 aa8.48□□□□□ -1.05
CD46-211ENST00000464082 ARID1BQ8NFD5 2236 aaPredicted RBP8.48□□□□□ -1.05
CD46-211ENST00000464082 PALM3A6NDB9 673 aaPredicted RBP8.47□□□□□ -1.05
CD46-211ENST00000464082 MLECQ14165 292 aa8.47□□□□□ -1.05
CD46-211ENST00000464082 RTN1Q16799 776 aa8.47□□□□□ -1.05
CD46-211ENST00000464082 SIX5Q8N196 739 aa8.47□□□□□ -1.05
CD46-211ENST00000464082 ZNF777Q9ULD5 760 aaPredicted RBP8.47□□□□□ -1.05
CD46-211ENST00000464082 MAST1Q9Y2H9 1570 aa8.47□□□□□ -1.05
CD46-211ENST00000464082 CCDC141Q6ZP82 1450 aa8.46□□□□□ -1.05
CD46-211ENST00000464082 IGLV1-40P01703 118 aa8.46□□□□□ -1.06
CD46-211ENST00000464082 Q6ZS46 218 aa8.46□□□□□ -1.06
CD46-211ENST00000464082 ADAMTS19Q8TE59 1207 aa8.46□□□□□ -1.06
CD46-211ENST00000464082 MKRN1Q9UHC7 482 aaKnown RBP8.46□□□□□ -1.06
CD46-211ENST00000464082 RAXQ9Y2V3 346 aa8.46□□□□□ -1.06
CD46-211ENST00000464082 RTEL1-TNFRSF6BF6WH68 1400 aa8.46□□□□□ -1.06
CD46-211ENST00000464082 A2MP01023 1474 aa8.45□□□□□ -1.06
CD46-211ENST00000464082 PTPN23Q9H3S7 1636 aa8.45□□□□□ -1.06
CD46-211ENST00000464082 PTCD1O75127 700 aaKnown RBP8.45□□□□□ -1.06
CD46-211ENST00000464082 LGR5O75473 907 aa8.45□□□□□ -1.06
CD46-211ENST00000464082 RARAP10276 462 aa8.45□□□□□ -1.06
CD46-211ENST00000464082 EIF2AK2P19525 551 aaKnown RBP8.45□□□□□ -1.06
CD46-211ENST00000464082 IDH3AP50213 366 aa8.45□□□□□ -1.06
CD46-211ENST00000464082 UBL7Q96S82 380 aaPredicted RBP8.45□□□□□ -1.06
CD46-211ENST00000464082 KLK14Q9P0G3 267 aa8.45□□□□□ -1.06
CD46-211ENST00000464082 MYOM3Q5VTT5 1437 aa8.45□□□□□ -1.06
CD46-211ENST00000464082 GLB1P16278 677 aa8.44□□□□□ -1.06
CD46-211ENST00000464082 EPB42P16452 691 aa8.44□□□□□ -1.06
CD46-211ENST00000464082 UCN2Q96RP3 112 aa8.44□□□□□ -1.06
CD46-211ENST00000464082 STOML1Q9UBI4 398 aa8.44□□□□□ -1.06
CD46-211ENST00000464082 SPAG9O60271 1321 aaKnown RBP8.44□□□□□ -1.06
CD46-211ENST00000464082 MROH1Q8NDA8 1641 aa8.43□□□□□ -1.06
CD46-211ENST00000464082 ZNF142P52746 1687 aaPredicted RBP8.43□□□□□ -1.06
CD46-211ENST00000464082 CFAP65Q6ZU64 1925 aaKnown RBP8.43□□□□□ -1.06
CD46-211ENST00000464082 POM121CA8CG34 1229 aa8.43□□□□□ -1.06
CD46-211ENST00000464082 J3QW42 95 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms