RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 GNRH1P01148 92 aa17.92■□□□□ 0.46
C9orf3-211ENST00000463372 PRMT2P55345 433 aa17.92■□□□□ 0.46
C9orf3-211ENST00000463372 CLMNQ96JQ2 1002 aa17.92■□□□□ 0.46
C9orf3-211ENST00000463372 GMLQ99445 158 aa17.92■□□□□ 0.46
C9orf3-211ENST00000463372 PTPN18Q99952 460 aa17.92■□□□□ 0.46
C9orf3-211ENST00000463372 DIAPH1O60610 1272 aaKnown RBP17.91■□□□□ 0.46
C9orf3-211ENST00000463372 TAF1CQ15572 869 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-211ENST00000463372 APOBEC3FQ8IUX4 373 aaKnown RBP17.91■□□□□ 0.46
C9orf3-211ENST00000463372 TDHQ8IZJ6 230 aa17.91■□□□□ 0.46
C9orf3-211ENST00000463372 TBC1D16Q8TBP0 767 aa17.91■□□□□ 0.46
C9orf3-211ENST00000463372 RNF208Q9H0X6 261 aa17.91■□□□□ 0.46
C9orf3-211ENST00000463372 IRS2Q9Y4H2 1338 aa17.91■□□□□ 0.46
C9orf3-211ENST00000463372 TESPA1A2RU30 521 aaPredicted RBP17.9■□□□□ 0.46
C9orf3-211ENST00000463372 PPP1R12BO60237 982 aaPredicted RBP17.9■□□□□ 0.46
C9orf3-211ENST00000463372 CCL5P13501 91 aa17.9■□□□□ 0.46
C9orf3-211ENST00000463372 MYL6BP14649 208 aa17.9■□□□□ 0.46
C9orf3-211ENST00000463372 OGFOD1Q8N543 542 aa17.9■□□□□ 0.46
C9orf3-211ENST00000463372 GUCD1Q96NT3 240 aa17.9■□□□□ 0.46
C9orf3-211ENST00000463372 UNCXA6NJT0 531 aa17.89■□□□□ 0.45
C9orf3-211ENST00000463372 WNT10BO00744 389 aa17.89■□□□□ 0.45
C9orf3-211ENST00000463372 MAP3K11Q16584 847 aa17.89■□□□□ 0.45
C9orf3-211ENST00000463372 LAMA2P24043 3122 aaKnown RBP17.88■□□□□ 0.45
C9orf3-211ENST00000463372 TMEM265A0A087WTH1 108 aa17.88■□□□□ 0.45
C9orf3-211ENST00000463372 TNFRSF10AO00220 468 aa17.88■□□□□ 0.45
C9orf3-211ENST00000463372 WDHD1O75717 1129 aaPredicted RBP17.88■□□□□ 0.45
C9orf3-211ENST00000463372 ARHGAP39Q9C0H5 1083 aa17.88■□□□□ 0.45
C9orf3-211ENST00000463372 PANK3Q9H999 370 aa17.88■□□□□ 0.45
C9orf3-211ENST00000463372 BIN2Q9UBW5 565 aaPredicted RBP17.88■□□□□ 0.45
C9orf3-211ENST00000463372 USP17L3A6NCW0 530 aa17.87■□□□□ 0.45
C9orf3-211ENST00000463372 USP17L4A6NCW7 530 aa17.87■□□□□ 0.45
C9orf3-211ENST00000463372 LACTBP83111 547 aaPredicted RBP17.87■□□□□ 0.45
C9orf3-211ENST00000463372 USP17L1Q7RTZ2 530 aa17.87■□□□□ 0.45
C9orf3-211ENST00000463372 U2AF1L4Q8WU68 220 aaKnown RBP17.87■□□□□ 0.45
C9orf3-211ENST00000463372 ECM2O94769 699 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-211ENST00000463372 GRK4P32298 578 aa17.86■□□□□ 0.45
C9orf3-211ENST00000463372 CELF1Q92879 486 aaKnown RBP17.86■□□□□ 0.45
C9orf3-211ENST00000463372 UFL1O94874 794 aa17.85■□□□□ 0.45
C9orf3-211ENST00000463372 SASH1O94885 1247 aa17.85■□□□□ 0.45
C9orf3-211ENST00000463372 COL1A1P02452 1464 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-211ENST00000463372 GJA5P36382 358 aa17.85■□□□□ 0.45
C9orf3-211ENST00000463372 UBXN2AP68543 259 aa17.85■□□□□ 0.45
C9orf3-211ENST00000463372 FAM109BQ6ICB4 259 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-211ENST00000463372 RAET1EQ8TD07 263 aa17.85■□□□□ 0.45
C9orf3-211ENST00000463372 RTF1Q92541 710 aaKnown RBP17.85■□□□□ 0.45
C9orf3-211ENST00000463372 TRMT112Q9UI30 125 aaKnown RBP17.85■□□□□ 0.45
C9orf3-211ENST00000463372 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
C9orf3-211ENST00000463372 IREB2P48200 963 aaKnown RBP17.84■□□□□ 0.45
C9orf3-211ENST00000463372 MAFAQ8NHW3 353 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-211ENST00000463372 TRIM47Q96LD4 638 aa17.84■□□□□ 0.45
C9orf3-211ENST00000463372 FAM161BQ96MY7 647 aa17.84■□□□□ 0.45
C9orf3-211ENST00000463372 ZMYND8Q9ULU4 1186 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-211ENST00000463372 RIPOR2Q9Y4F9 1068 aa17.84■□□□□ 0.45
C9orf3-211ENST00000463372 NCOR1O75376 2440 aa17.83■□□□□ 0.45
C9orf3-211ENST00000463372 U2SURPO15042 1029 aaKnown RBP17.83■□□□□ 0.44
C9orf3-211ENST00000463372 C7orf61Q8IZ16 206 aa17.83■□□□□ 0.44
C9orf3-211ENST00000463372 UBE2OQ9C0C9 1292 aaKnown RBP17.83■□□□□ 0.44
C9orf3-211ENST00000463372 ANKIB1Q9P2G1 1089 aa17.83■□□□□ 0.44
C9orf3-211ENST00000463372 POTEB2H3BUK9 544 aa17.82■□□□□ 0.44
C9orf3-211ENST00000463372 SGPL1O95470 568 aa17.82■□□□□ 0.44
C9orf3-211ENST00000463372 HOXD10P28358 340 aa17.82■□□□□ 0.44
C9orf3-211ENST00000463372 DEFB129Q9H1M3 183 aa17.82■□□□□ 0.44
C9orf3-211ENST00000463372 GGA1Q9UJY5 639 aa17.82■□□□□ 0.44
C9orf3-211ENST00000463372 TFRCP02786 760 aaKnown RBP17.81■□□□□ 0.44
C9orf3-211ENST00000463372 CAPN2P17655 700 aa17.81■□□□□ 0.44
C9orf3-211ENST00000463372 MAGEA10P43363 369 aaPredicted RBP17.81■□□□□ 0.44
C9orf3-211ENST00000463372 MAP3K12Q12852 859 aa17.81■□□□□ 0.44
C9orf3-211ENST00000463372 MCM10Q7L590 875 aa17.81■□□□□ 0.44
C9orf3-211ENST00000463372 PODNQ7Z5L7 613 aa17.81■□□□□ 0.44
C9orf3-211ENST00000463372 ANKRD13AQ8IZ07 590 aa17.81■□□□□ 0.44
C9orf3-211ENST00000463372 MS4A4AQ96JQ5 239 aa17.81■□□□□ 0.44
C9orf3-211ENST00000463372 PODXL2Q9NZ53 605 aa17.81■□□□□ 0.44
C9orf3-211ENST00000463372 SRRDQ9UH36 339 aa17.81■□□□□ 0.44
C9orf3-211ENST00000463372 CCL15-CCL14A0A0B4J2E2 113 aa17.8■□□□□ 0.44
C9orf3-211ENST00000463372 TLR2O60603 784 aa17.8■□□□□ 0.44
C9orf3-211ENST00000463372 CCL15Q16663 113 aa17.8■□□□□ 0.44
C9orf3-211ENST00000463372 SUPT20HL1Q3ZLR7 823 aa17.8■□□□□ 0.44
C9orf3-211ENST00000463372 NLRP10Q86W26 655 aa17.8■□□□□ 0.44
C9orf3-211ENST00000463372 BRI3BPQ8WY22 251 aa17.8■□□□□ 0.44
C9orf3-211ENST00000463372 OPTNQ96CV9 577 aa17.8■□□□□ 0.44
C9orf3-211ENST00000463372 OTOFQ9HC10 1997 aa17.8■□□□□ 0.44
C9orf3-211ENST00000463372 ECM29Q5VYK3 1845 aa17.79■□□□□ 0.44
C9orf3-211ENST00000463372 SSC5DA1L4H1 1573 aa17.79■□□□□ 0.44
C9orf3-211ENST00000463372 MYO3BQ8WXR4 1341 aa17.79■□□□□ 0.44
C9orf3-211ENST00000463372 MMP14P50281 582 aa17.79■□□□□ 0.44
C9orf3-211ENST00000463372 HSP90AB3PQ58FF7 597 aa17.79■□□□□ 0.44
C9orf3-211ENST00000463372 KNSTRNQ9Y448 316 aa17.79■□□□□ 0.44
C9orf3-211ENST00000463372 PIEZO1Q92508 2521 aa17.79■□□□□ 0.44
C9orf3-211ENST00000463372 GTF2A2P52657 109 aa17.78■□□□□ 0.44
C9orf3-211ENST00000463372 ZNF697Q5TEC3 545 aa17.78■□□□□ 0.44
C9orf3-211ENST00000463372 FAM43AQ8N2R8 423 aa17.78■□□□□ 0.44
C9orf3-211ENST00000463372 FBXW7Q969H0 707 aa17.78■□□□□ 0.44
C9orf3-211ENST00000463372 PAWRQ96IZ0 340 aaKnown RBP17.78■□□□□ 0.44
C9orf3-211ENST00000463372 UNC93B1Q9H1C4 597 aa17.78■□□□□ 0.44
C9orf3-211ENST00000463372 ELP3Q9H9T3 547 aa17.78■□□□□ 0.44
C9orf3-211ENST00000463372 PPP2R3BQ9Y5P8 575 aa17.78■□□□□ 0.44
C9orf3-211ENST00000463372 SYN1P17600 705 aa17.77■□□□□ 0.44
C9orf3-211ENST00000463372 PSMC4P43686 418 aa17.77■□□□□ 0.44
C9orf3-211ENST00000463372 RPS8P62241 208 aaKnown RBP17.77■□□□□ 0.44
C9orf3-211ENST00000463372 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.44
C9orf3-211ENST00000463372 TJAP1Q5JTD0 557 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms