RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 SPEF2Q9C093 1822 aa9.21□□□□□ -0.93
PTPRF-210ENST00000463041 MAP2K2P36507 400 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 KCNJ4P48050 445 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 CHRNDQ07001 517 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 KIF4BQ2VIQ3 1234 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 ALDH1L2Q3SY69 923 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 STRIP1Q5VSL9 837 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 TTLL5Q6EMB2 1281 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 C15orf52Q6ZUT6 534 aaKnown RBP9.21□□□□□ -0.94
PTPRF-210ENST00000463041 KRT26Q7Z3Y9 468 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 SAPCD2Q86UD0 394 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 TRMT2AQ8IZ69 625 aaKnown RBP9.21□□□□□ -0.94
PTPRF-210ENST00000463041 AIDAQ96BJ3 306 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 CAPNS2Q96L46 248 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 CHMP3Q9Y3E7 222 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 PTPRCP08575 1304 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 ZNF609O15014 1411 aa9.21□□□□□ -0.94
PTPRF-210ENST00000463041 EGFRP00533 1210 aa9.2□□□□□ -0.94
PTPRF-210ENST00000463041 CT47B1P0C2W7 299 aaPredicted RBP9.2□□□□□ -0.94
PTPRF-210ENST00000463041 CTCFP49711 727 aaPredicted RBP9.2□□□□□ -0.94
PTPRF-210ENST00000463041 SCARF1Q14162 830 aa9.2□□□□□ -0.94
PTPRF-210ENST00000463041 TAF7LQ5H9L4 462 aa9.2□□□□□ -0.94
PTPRF-210ENST00000463041 EPHA10Q5JZY3 1008 aa9.2□□□□□ -0.94
PTPRF-210ENST00000463041 DACT2Q5SW24 774 aa9.2□□□□□ -0.94
PTPRF-210ENST00000463041 LDHAL6AQ6ZMR3 332 aa9.2□□□□□ -0.94
PTPRF-210ENST00000463041 TXNRD3Q86VQ6 643 aa9.2□□□□□ -0.94
PTPRF-210ENST00000463041 OGFOD1Q8N543 542 aa9.2□□□□□ -0.94
PTPRF-210ENST00000463041 SSH1Q8WYL5 1049 aa9.2□□□□□ -0.94
PTPRF-210ENST00000463041 PRDM10Q9NQV6 1147 aa9.2□□□□□ -0.94
PTPRF-210ENST00000463041 UTYO14607 1347 aa9.2□□□□□ -0.94
PTPRF-210ENST00000463041 MYO3BQ8WXR4 1341 aa9.2□□□□□ -0.94
PTPRF-210ENST00000463041 FOXN1O15353 648 aa9.19□□□□□ -0.94
PTPRF-210ENST00000463041 CYP4F22Q6NT55 531 aa9.19□□□□□ -0.94
PTPRF-210ENST00000463041 PAXIP1Q6ZW49 1069 aaPredicted RBP9.19□□□□□ -0.94
PTPRF-210ENST00000463041 SULF1Q8IWU6 871 aa9.19□□□□□ -0.94
PTPRF-210ENST00000463041 C2orf69Q8N8R5 385 aa9.19□□□□□ -0.94
PTPRF-210ENST00000463041 CDCA7LQ96GN5 454 aa9.19□□□□□ -0.94
PTPRF-210ENST00000463041 ZNF408Q9H9D4 720 aa9.19□□□□□ -0.94
PTPRF-210ENST00000463041 CD209Q9NNX6 404 aa9.19□□□□□ -0.94
PTPRF-210ENST00000463041 MYOZ2Q9NPC6 264 aa9.19□□□□□ -0.94
PTPRF-210ENST00000463041 CNNM1Q9NRU3 951 aa9.19□□□□□ -0.94
PTPRF-210ENST00000463041 TAF5LO75529 589 aa9.18□□□□□ -0.94
PTPRF-210ENST00000463041 NBPF7P0C2Y1 421 aaPredicted RBP9.18□□□□□ -0.94
PTPRF-210ENST00000463041 GTF2IP78347 998 aa9.18□□□□□ -0.94
PTPRF-210ENST00000463041 TNS4Q8IZW8 715 aa9.18□□□□□ -0.94
PTPRF-210ENST00000463041 HELBQ8NG08 1087 aaPredicted RBP9.18□□□□□ -0.94
PTPRF-210ENST00000463041 KAZALD1Q96I82 304 aa9.18□□□□□ -0.94
PTPRF-210ENST00000463041 SUCLG2Q96I99 432 aa9.18□□□□□ -0.94
PTPRF-210ENST00000463041 ZNF594Q96JF6 807 aaPredicted RBP9.18□□□□□ -0.94
PTPRF-210ENST00000463041 BEGAINQ9BUH8 593 aa9.18□□□□□ -0.94
PTPRF-210ENST00000463041 PITPNM2Q9BZ72 1349 aa9.18□□□□□ -0.94
PTPRF-210ENST00000463041 HDAC9Q9UKV0 1011 aa9.18□□□□□ -0.94
PTPRF-210ENST00000463041 PLIN1O60240 522 aa9.17□□□□□ -0.94
PTPRF-210ENST00000463041 IL1R1P14778 569 aa9.17□□□□□ -0.94
PTPRF-210ENST00000463041 BRPF1P55201 1214 aaPredicted RBP9.17□□□□□ -0.94
PTPRF-210ENST00000463041 HUNKP57058 714 aa9.17□□□□□ -0.94
PTPRF-210ENST00000463041 UBE4AQ14139 1066 aa9.17□□□□□ -0.94
PTPRF-210ENST00000463041 RABL6Q3YEC7 729 aaPredicted RBP9.17□□□□□ -0.94
PTPRF-210ENST00000463041 ANGEL2Q5VTE6 544 aaKnown RBP9.17□□□□□ -0.94
PTPRF-210ENST00000463041 ZNF804AQ7Z570 1209 aa9.17□□□□□ -0.94
PTPRF-210ENST00000463041 FBXW7Q969H0 707 aa9.17□□□□□ -0.94
PTPRF-210ENST00000463041 CCDC102AQ96A19 550 aa9.17□□□□□ -0.94
PTPRF-210ENST00000463041 USP44Q9H0E7 712 aa9.17□□□□□ -0.94
PTPRF-210ENST00000463041 GBA2Q9HCG7 927 aaPredicted RBP9.17□□□□□ -0.94
PTPRF-210ENST00000463041 GGA3Q9NZ52 723 aa9.17□□□□□ -0.94
PTPRF-210ENST00000463041 RIPOR2Q9Y4F9 1068 aa9.17□□□□□ -0.94
PTPRF-210ENST00000463041 IRS2Q9Y4H2 1338 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 ADM5C9JUS6 153 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 SNAP23O00161 211 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 WNT10BO00744 389 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 SASH1O94885 1247 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 KLRK1P26718 216 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 FKBP1AP62942 108 aaKnown RBP9.16□□□□□ -0.94
PTPRF-210ENST00000463041 FKBP1BP68106 108 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 NOGQ13253 232 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 GRM1Q13255 1194 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 DLK2Q6UY11 383 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 MXD3Q9BW11 206 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 BICC1Q9H694 974 aaKnown RBP9.16□□□□□ -0.94
PTPRF-210ENST00000463041 SMC4Q9NTJ3 1288 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 HDAC5Q9UQL6 1122 aa9.16□□□□□ -0.94
PTPRF-210ENST00000463041 ASTN2O75129 1339 aaPredicted RBP9.15□□□□□ -0.94
PTPRF-210ENST00000463041 MROH5Q6ZUA9 1318 aa9.15□□□□□ -0.94
PTPRF-210ENST00000463041 CA12O43570 354 aa9.15□□□□□ -0.94
PTPRF-210ENST00000463041 AOC2O75106 756 aa9.15□□□□□ -0.94
PTPRF-210ENST00000463041 LBX1P52954 281 aa9.15□□□□□ -0.94
PTPRF-210ENST00000463041 NBPF9Q3BBW0 867 aa9.15□□□□□ -0.94
PTPRF-210ENST00000463041 RGMBQ6NW40 437 aa9.15□□□□□ -0.94
PTPRF-210ENST00000463041 KIAA0825Q8IV33 1275 aa9.15□□□□□ -0.94
PTPRF-210ENST00000463041 MTMR14Q8NCE2 650 aa9.15□□□□□ -0.94
PTPRF-210ENST00000463041 CDCA5Q96FF9 252 aa9.15□□□□□ -0.94
PTPRF-210ENST00000463041 FAM205AQ6ZU69 1335 aa9.14□□□□□ -0.95
PTPRF-210ENST00000463041 HSPA8P11142 646 aaKnown RBP9.14□□□□□ -0.95
PTPRF-210ENST00000463041 HIBADHP31937 336 aaKnown RBP9.14□□□□□ -0.95
PTPRF-210ENST00000463041 ZNF157P51786 506 aaPredicted RBP9.14□□□□□ -0.95
PTPRF-210ENST00000463041 DLGAP5Q15398 846 aa9.14□□□□□ -0.95
PTPRF-210ENST00000463041 REM2Q8IYK8 340 aaPredicted RBP9.14□□□□□ -0.95
PTPRF-210ENST00000463041 ANKRD44Q8N8A2 993 aa9.14□□□□□ -0.95
PTPRF-210ENST00000463041 TDRD7Q8NHU6 1098 aaKnown RBP9.14□□□□□ -0.95
PTPRF-210ENST00000463041 ARHGAP45Q92619 1136 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms