RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TNP2Q05952 138 aa7.74□□□□□ -1.17
COPS3-204ENST00000462236 FAM182BQ5T319 152 aa7.74□□□□□ -1.17
COPS3-204ENST00000462236 XKR5Q6UX68 686 aa7.74□□□□□ -1.17
COPS3-204ENST00000462236 SV2AQ7L0J3 742 aa7.74□□□□□ -1.17
COPS3-204ENST00000462236 TTC16Q8NEE8 873 aa7.74□□□□□ -1.17
COPS3-204ENST00000462236 EDEM1Q92611 657 aa7.74□□□□□ -1.17
COPS3-204ENST00000462236 TRERF1Q96PN7 1200 aa7.74□□□□□ -1.17
COPS3-204ENST00000462236 FAM129BQ96TA1 746 aa7.74□□□□□ -1.17
COPS3-204ENST00000462236 CUEDC1Q9NWM3 386 aaPredicted RBP7.74□□□□□ -1.17
COPS3-204ENST00000462236 RTCBQ9Y3I0 505 aaKnown RBP7.74□□□□□ -1.17
COPS3-204ENST00000462236 TIAM1Q13009 1591 aa7.74□□□□□ -1.17
COPS3-204ENST00000462236 DHX29Q7Z478 1369 aaKnown RBP7.73□□□□□ -1.17
COPS3-204ENST00000462236 MIA2Q96PC5 1412 aa7.73□□□□□ -1.17
COPS3-204ENST00000462236 POTECB2RU33 542 aa7.73□□□□□ -1.17
COPS3-204ENST00000462236 NEFLP07196 543 aa7.73□□□□□ -1.17
COPS3-204ENST00000462236 DNM1Q05193 864 aaKnown RBP7.73□□□□□ -1.17
COPS3-204ENST00000462236 GGT6Q6P531 493 aa7.73□□□□□ -1.17
COPS3-204ENST00000462236 ATCAYQ86WG3 371 aa7.73□□□□□ -1.17
COPS3-204ENST00000462236 ANKLE2Q86XL3 938 aa7.73□□□□□ -1.17
COPS3-204ENST00000462236 GPR152Q8TDT2 470 aa7.73□□□□□ -1.17
COPS3-204ENST00000462236 ALKBH8Q96BT7 664 aaKnown RBP7.73□□□□□ -1.17
COPS3-204ENST00000462236 CCDC87Q9NVE4 849 aa7.73□□□□□ -1.17
COPS3-204ENST00000462236 POLIQ9UNA4 740 aa7.73□□□□□ -1.17
COPS3-204ENST00000462236 KCNH4Q9UQ05 1017 aa7.73□□□□□ -1.17
COPS3-204ENST00000462236 SRCAPQ6ZRS2 3230 aa7.73□□□□□ -1.17
COPS3-204ENST00000462236 MAPTP10636 758 aaKnown RBP7.72□□□□□ -1.17
COPS3-204ENST00000462236 PDE12Q6L8Q7 609 aaKnown RBP7.72□□□□□ -1.17
COPS3-204ENST00000462236 RGS22Q8NE09 1264 aa7.72□□□□□ -1.17
COPS3-204ENST00000462236 NUDT16Q96DE0 195 aaKnown RBP7.72□□□□□ -1.17
COPS3-204ENST00000462236 MARK1Q9P0L2 795 aa7.72□□□□□ -1.17
COPS3-204ENST00000462236 AMOTL2Q9Y2J4 779 aa7.72□□□□□ -1.17
COPS3-204ENST00000462236 ROBO1Q9Y6N7 1651 aa7.72□□□□□ -1.17
COPS3-204ENST00000462236 CEP152O94986 1710 aa7.72□□□□□ -1.17
COPS3-204ENST00000462236 FAM135BQ49AJ0 1406 aa7.71□□□□□ -1.17
COPS3-204ENST00000462236 ARHGAP23Q9P227 1491 aa7.71□□□□□ -1.18
COPS3-204ENST00000462236 KHNYNO15037 678 aaKnown RBP7.71□□□□□ -1.18
COPS3-204ENST00000462236 BNIP3LO60238 219 aa7.71□□□□□ -1.18
COPS3-204ENST00000462236 ZNF787Q6DD87 383 aa7.71□□□□□ -1.18
COPS3-204ENST00000462236 THEMISQ8N1K5 641 aaPredicted RBP7.71□□□□□ -1.18
COPS3-204ENST00000462236 GTPBP3Q969Y2 492 aaKnown RBP7.71□□□□□ -1.18
COPS3-204ENST00000462236 KCNMB2Q9Y691 235 aa7.71□□□□□ -1.18
COPS3-204ENST00000462236 MROH1Q8NDA8 1641 aa7.7□□□□□ -1.18
COPS3-204ENST00000462236 SLIT1O75093 1534 aa7.7□□□□□ -1.18
COPS3-204ENST00000462236 H3BM21 787 aa7.7□□□□□ -1.18
COPS3-204ENST00000462236 VSIG8P0DPA2 414 aa7.7□□□□□ -1.18
COPS3-204ENST00000462236 FGD1P98174 961 aa7.7□□□□□ -1.18
COPS3-204ENST00000462236 TMC7Q7Z402 723 aa7.7□□□□□ -1.18
COPS3-204ENST00000462236 KDM5AP29375 1690 aaKnown RBP7.7□□□□□ -1.18
COPS3-204ENST00000462236 NCOA2Q15596 1464 aa7.69□□□□□ -1.18
COPS3-204ENST00000462236 ANKRD33BA6NCL7 494 aa7.69□□□□□ -1.18
COPS3-204ENST00000462236 TREHO43280 583 aa7.69□□□□□ -1.18
COPS3-204ENST00000462236 IGHA2P01877 340 aa7.69□□□□□ -1.18
COPS3-204ENST00000462236 FGFR3P22607 806 aa7.69□□□□□ -1.18
COPS3-204ENST00000462236 CCINQ13939 588 aa7.69□□□□□ -1.18
COPS3-204ENST00000462236 CMTR1Q8N1G2 835 aaKnown RBP7.69□□□□□ -1.18
COPS3-204ENST00000462236 VWA5B2Q8N398 1253 aa7.69□□□□□ -1.18
COPS3-204ENST00000462236 TMC1Q8TDI8 760 aa7.69□□□□□ -1.18
COPS3-204ENST00000462236 EIF2AK4Q9P2K8 1649 aaKnown RBP7.69□□□□□ -1.18
COPS3-204ENST00000462236 CAMSAP2Q08AD1 1489 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 ABCC3O15438 1527 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 MAP3K1Q13233 1512 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 ARHGEF5Q12774 1597 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 DCDC2BA2VCK2 349 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 CDC14CA4D256 554 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 XYLBO75191 536 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 GRNP28799 593 aaKnown RBP7.68□□□□□ -1.18
COPS3-204ENST00000462236 SFSWAPQ12872 951 aaKnown RBP7.68□□□□□ -1.18
COPS3-204ENST00000462236 NEUROD1Q13562 356 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 DSC3Q14574 896 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 NPAS4Q8IUM7 802 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 SLC16A10Q8TF71 515 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 ABHD17AQ96GS6 310 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 GSX2Q9BZM3 304 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 CFDP1Q9UEE9 299 aaPredicted RBP7.68□□□□□ -1.18
COPS3-204ENST00000462236 PHLPP1O60346 1717 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 CHD2O14647 1828 aaKnown RBP7.68□□□□□ -1.18
COPS3-204ENST00000462236 ERVK-7P63135 1459 aa7.68□□□□□ -1.18
COPS3-204ENST00000462236 PLCB3Q01970 1234 aa7.67□□□□□ -1.18
COPS3-204ENST00000462236 FMR1Q06787 632 aaKnown RBP eCLIP7.67□□□□□ -1.18
COPS3-204ENST00000462236 TRIP4Q15650 581 aaPredicted RBP7.67□□□□□ -1.18
COPS3-204ENST00000462236 C8orf34Q49A92 452 aa7.67□□□□□ -1.18
COPS3-204ENST00000462236 NLRP13Q86W25 1043 aa7.67□□□□□ -1.18
COPS3-204ENST00000462236 PMEPA1Q969W9 287 aa7.67□□□□□ -1.18
COPS3-204ENST00000462236 GGNBP2Q9H3C7 697 aa7.67□□□□□ -1.18
COPS3-204ENST00000462236 AVENQ9NQS1 362 aaPredicted RBP7.67□□□□□ -1.18
COPS3-204ENST00000462236 NSFL1CQ9UNZ2 370 aaKnown RBP7.67□□□□□ -1.18
COPS3-204ENST00000462236 ZNF644Q9H582 1327 aaPredicted RBP7.67□□□□□ -1.18
COPS3-204ENST00000462236 CCNB3Q8WWL7 1395 aa7.67□□□□□ -1.18
COPS3-204ENST00000462236 CCDC141Q6ZP82 1450 aa7.67□□□□□ -1.18
COPS3-204ENST00000462236 SCAF11Q99590 1463 aaKnown RBP7.67□□□□□ -1.18
COPS3-204ENST00000462236 TERTO14746 1132 aaKnown RBP7.66□□□□□ -1.18
COPS3-204ENST00000462236 GPR182O15218 404 aa7.66□□□□□ -1.18
COPS3-204ENST00000462236 MAP3K6O95382 1288 aa7.66□□□□□ -1.18
COPS3-204ENST00000462236 ZNF438Q7Z4V0 828 aa7.66□□□□□ -1.18
COPS3-204ENST00000462236 DNAJC25Q9H1X3 360 aa7.66□□□□□ -1.18
COPS3-204ENST00000462236 EHBP1L1Q8N3D4 1523 aa7.66□□□□□ -1.18
COPS3-204ENST00000462236 NWD1Q149M9 1564 aa7.66□□□□□ -1.18
COPS3-204ENST00000462236 MAST1Q9Y2H9 1570 aa7.66□□□□□ -1.18
COPS3-204ENST00000462236 COL16A1Q07092 1604 aaPredicted RBP7.66□□□□□ -1.18
COPS3-204ENST00000462236 TET3O43151 1660 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms